Arvados

#' Arvados API

#' The API to interact with Arvados.

#' 

#' Auto-generated code by googleAuthR::gar_create_api_skeleton

#'  at 2017-07-19 18:57:49

#' filename: arvados_functions.R

#' api_json: apis

#' 

#' @details 

#' Authentication scopes used are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' @docType package 

#' @name arvados_googleAuthR

#' 

NULL

## NULL

#' A helper function that tests whether an object is either NULL _or_

#' a list of NULLs

#'

#' @keywords internal

is.NullOb <- function(x) is.null(x) | all(sapply(x, is.null))

#' Recursively step down into list, removing all such objects

#'

#' @keywords internal

rmNullObs <- function(x) {

    x <- Filter(Negate(is.NullOb), x)

    lapply(x, function(x) if (is.list(x)) 

        rmNullObs(x) else x)

}

#' Gets a User's metadata by UUID.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid The UUID of the User in question

#' @importFrom googleAuthR gar_api_generator

#' @export

users.get <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/users/%s", uuid)

    # arvados.users.get

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' List Users.                   The <code>list</code> method returns a                   <a href='/api/resources.html'>resource list</a> of                   matching Users. For example:                   <pre>                   {                    'kind':'arvados#userList',                    'etag':'',                    'self_link':'',                    'next_page_token':'',                    'next_link':'',                    'items':[                       ...                    ],                    'items_available':745,                    '_profile':{                     'request_time':0.157236317                    }                    </pre>

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param filters 

#' @param where 

#' @param order 

#' @param select 

#' @param distinct 

#' @param limit 

#' @param offset 

#' @param count 

#' @importFrom googleAuthR gar_api_generator

#' @export

users.list <- function(filters, where, order, select, distinct, limit, offset, count) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/users"

    # arvados.users.list

    pars = list(filters = filters, where = where, order = order, select = select, 

        distinct = distinct, limit = limit, offset = offset, count = count)

    f <- googleAuthR::gar_api_generator(url, "GET", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    f()

}

#' Create a new User.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param  The \link{} object to pass to this method

#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision

#' @importFrom googleAuthR gar_api_generator

#' @family  functions

#' @export

users.create <- function(NA. = NULL, ensure_unique_name) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/users"

    # arvados.users.create

    pars = list(ensure_unique_name = ensure_unique_name)

    f <- googleAuthR::gar_api_generator(url, "POST", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    stopifnot(inherits(, "gar_"))

    f(the_body = )

}

#' Update attributes of an existing User.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param  The \link{} object to pass to this method

#' @param uuid The UUID of the User in question

#' @importFrom googleAuthR gar_api_generator

#' @family  functions

#' @export

users.update <- function(NA. = NULL, uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/users/%s", uuid)

    # arvados.users.update

    f <- googleAuthR::gar_api_generator(url, "PUT", data_parse_function = function(x) x)

    stopifnot(inherits(, "gar_"))

    f(the_body = )

}

#' Delete an existing User.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid The UUID of the User in question

#' @importFrom googleAuthR gar_api_generator

#' @export

users.delete <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/users/%s", uuid)

    # arvados.users.delete

    f <- googleAuthR::gar_api_generator(url, "DELETE", data_parse_function = function(x) x)

    f()

}

#' current users

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' #' @importFrom googleAuthR gar_api_generator

#' @export

users.current <- function() {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/users/current"

    # arvados.users.current

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' system users

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' #' @importFrom googleAuthR gar_api_generator

#' @export

users.system <- function() {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/users/system"

    # arvados.users.system

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' activate users

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

users.activate <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/users/%s/activate", uuid)

    # arvados.users.activate

    f <- googleAuthR::gar_api_generator(url, "POST", data_parse_function = function(x) x)

    f()

}

#' setup users

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param user 

#' @param openid_prefix 

#' @param repo_name 

#' @param vm_uuid 

#' @param send_notification_email 

#' @importFrom googleAuthR gar_api_generator

#' @export

users.setup <- function(user, openid_prefix, repo_name, vm_uuid, send_notification_email) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/users/setup"

    # arvados.users.setup

    pars = list(user = user, openid_prefix = openid_prefix, repo_name = repo_name, 

        vm_uuid = vm_uuid, send_notification_email = send_notification_email)

    f <- googleAuthR::gar_api_generator(url, "POST", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    f()

}

#' unsetup users

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

users.unsetup <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/users/%s/unsetup", uuid)

    # arvados.users.unsetup

    f <- googleAuthR::gar_api_generator(url, "POST", data_parse_function = function(x) x)

    f()

}

#' List Users.                   The <code>list</code> method returns a                   <a href='/api/resources.html'>resource list</a> of                   matching Users. For example:                   <pre>                   {                    'kind':'arvados#userList',                    'etag':'',                    'self_link':'',                    'next_page_token':'',                    'next_link':'',                    'items':[                       ...                    ],                    'items_available':745,                    '_profile':{                     'request_time':0.157236317                    }                    </pre>

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param filters 

#' @param where 

#' @param order 

#' @param select 

#' @param distinct 

#' @param limit 

#' @param offset 

#' @param count 

#' @importFrom googleAuthR gar_api_generator

#' @export

users.list <- function(filters, where, order, select, distinct, limit, offset, count) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/users"

    # arvados.users.list

    pars = list(filters = filters, where = where, order = order, select = select, 

        distinct = distinct, limit = limit, offset = offset, count = count)

    f <- googleAuthR::gar_api_generator(url, "GET", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    f()

}

#' show users

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

users.show <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/users/%s", uuid)

    # arvados.users.show

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' destroy users

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

users.destroy <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/users/%s", uuid)

    # arvados.users.destroy

    f <- googleAuthR::gar_api_generator(url, "DELETE", data_parse_function = function(x) x)

    f()

}

#' Gets a Workflow's metadata by UUID.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid The UUID of the Workflow in question

#' @importFrom googleAuthR gar_api_generator

#' @export

workflows.get <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/workflows/%s", uuid)

    # arvados.workflows.get

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' List Workflows.                   The <code>list</code> method returns a                   <a href='/api/resources.html'>resource list</a> of                   matching Workflows. For example:                   <pre>                   {                    'kind':'arvados#workflowList',                    'etag':'',                    'self_link':'',                    'next_page_token':'',                    'next_link':'',                    'items':[                       ...                    ],                    'items_available':745,                    '_profile':{                     'request_time':0.157236317                    }                    </pre>

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param filters 

#' @param where 

#' @param order 

#' @param select 

#' @param distinct 

#' @param limit 

#' @param offset 

#' @param count 

#' @importFrom googleAuthR gar_api_generator

#' @export

workflows.list <- function(filters, where, order, select, distinct, limit, offset, 

    count) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/workflows"

    # arvados.workflows.list

    pars = list(filters = filters, where = where, order = order, select = select, 

        distinct = distinct, limit = limit, offset = offset, count = count)

    f <- googleAuthR::gar_api_generator(url, "GET", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    f()

}

#' Create a new Workflow.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param  The \link{} object to pass to this method

#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision

#' @importFrom googleAuthR gar_api_generator

#' @family  functions

#' @export

workflows.create <- function(NA. = NULL, ensure_unique_name) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/workflows"

    # arvados.workflows.create

    pars = list(ensure_unique_name = ensure_unique_name)

    f <- googleAuthR::gar_api_generator(url, "POST", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    stopifnot(inherits(, "gar_"))

    f(the_body = )

}

#' Update attributes of an existing Workflow.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param  The \link{} object to pass to this method

#' @param uuid The UUID of the Workflow in question

#' @importFrom googleAuthR gar_api_generator

#' @family  functions

#' @export

workflows.update <- function(NA. = NULL, uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/workflows/%s", uuid)

    # arvados.workflows.update

    f <- googleAuthR::gar_api_generator(url, "PUT", data_parse_function = function(x) x)

    stopifnot(inherits(, "gar_"))

    f(the_body = )

}

#' Delete an existing Workflow.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid The UUID of the Workflow in question

#' @importFrom googleAuthR gar_api_generator

#' @export

workflows.delete <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/workflows/%s", uuid)

    # arvados.workflows.delete

    f <- googleAuthR::gar_api_generator(url, "DELETE", data_parse_function = function(x) x)

    f()

}

#' List Workflows.                   The <code>list</code> method returns a                   <a href='/api/resources.html'>resource list</a> of                   matching Workflows. For example:                   <pre>                   {                    'kind':'arvados#workflowList',                    'etag':'',                    'self_link':'',                    'next_page_token':'',                    'next_link':'',                    'items':[                       ...                    ],                    'items_available':745,                    '_profile':{                     'request_time':0.157236317                    }                    </pre>

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param filters 

#' @param where 

#' @param order 

#' @param select 

#' @param distinct 

#' @param limit 

#' @param offset 

#' @param count 

#' @importFrom googleAuthR gar_api_generator

#' @export

workflows.list <- function(filters, where, order, select, distinct, limit, offset, 

    count) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/workflows"

    # arvados.workflows.list

    pars = list(filters = filters, where = where, order = order, select = select, 

        distinct = distinct, limit = limit, offset = offset, count = count)

    f <- googleAuthR::gar_api_generator(url, "GET", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    f()

}

#' show workflows

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

workflows.show <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/workflows/%s", uuid)

    # arvados.workflows.show

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' destroy workflows

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

workflows.destroy <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/workflows/%s", uuid)

    # arvados.workflows.destroy

    f <- googleAuthR::gar_api_generator(url, "DELETE", data_parse_function = function(x) x)

    f()

}

#' Gets a Link's metadata by UUID.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid The UUID of the Link in question

#' @importFrom googleAuthR gar_api_generator

#' @export

links.get <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/links/%s", uuid)

    # arvados.links.get

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' List Links.                   The <code>list</code> method returns a                   <a href='/api/resources.html'>resource list</a> of                   matching Links. For example:                   <pre>                   {                    'kind':'arvados#linkList',                    'etag':'',                    'self_link':'',                    'next_page_token':'',                    'next_link':'',                    'items':[                       ...                    ],                    'items_available':745,                    '_profile':{                     'request_time':0.157236317                    }                    </pre>

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param filters 

#' @param where 

#' @param order 

#' @param select 

#' @param distinct 

#' @param limit 

#' @param offset 

#' @param count 

#' @importFrom googleAuthR gar_api_generator

#' @export

links.list <- function(filters, where, order, select, distinct, limit, offset, count) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/links"

    # arvados.links.list

    pars = list(filters = filters, where = where, order = order, select = select, 

        distinct = distinct, limit = limit, offset = offset, count = count)

    f <- googleAuthR::gar_api_generator(url, "GET", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    f()

}

#' Create a new Link.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param  The \link{} object to pass to this method

#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision

#' @importFrom googleAuthR gar_api_generator

#' @family  functions

#' @export

links.create <- function(NA. = NULL, ensure_unique_name) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/links"

    # arvados.links.create

    pars = list(ensure_unique_name = ensure_unique_name)

    f <- googleAuthR::gar_api_generator(url, "POST", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    stopifnot(inherits(, "gar_"))

    f(the_body = )

}

#' Update attributes of an existing Link.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param  The \link{} object to pass to this method

#' @param uuid The UUID of the Link in question

#' @importFrom googleAuthR gar_api_generator

#' @family  functions

#' @export

links.update <- function(NA. = NULL, uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/links/%s", uuid)

    # arvados.links.update

    f <- googleAuthR::gar_api_generator(url, "PUT", data_parse_function = function(x) x)

    stopifnot(inherits(, "gar_"))

    f(the_body = )

}

#' Delete an existing Link.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid The UUID of the Link in question

#' @importFrom googleAuthR gar_api_generator

#' @export

links.delete <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/links/%s", uuid)

    # arvados.links.delete

    f <- googleAuthR::gar_api_generator(url, "DELETE", data_parse_function = function(x) x)

    f()

}

#' List Links.                   The <code>list</code> method returns a                   <a href='/api/resources.html'>resource list</a> of                   matching Links. For example:                   <pre>                   {                    'kind':'arvados#linkList',                    'etag':'',                    'self_link':'',                    'next_page_token':'',                    'next_link':'',                    'items':[                       ...                    ],                    'items_available':745,                    '_profile':{                     'request_time':0.157236317                    }                    </pre>

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' \item https://api.curoverse.com/auth/arvados.readonly

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados, https://api.curoverse.com/auth/arvados.readonly)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param filters 

#' @param where 

#' @param order 

#' @param select 

#' @param distinct 

#' @param limit 

#' @param offset 

#' @param count 

#' @importFrom googleAuthR gar_api_generator

#' @export

links.list <- function(filters, where, order, select, distinct, limit, offset, count) {

    url <- "https://qr1hi.arvadosapi.com/arvados/v1/links"

    # arvados.links.list

    pars = list(filters = filters, where = where, order = order, select = select, 

        distinct = distinct, limit = limit, offset = offset, count = count)

    f <- googleAuthR::gar_api_generator(url, "GET", pars_args = rmNullObs(pars), 

        data_parse_function = function(x) x)

    f()

}

#' show links

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

links.show <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/links/%s", uuid)

    # arvados.links.show

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' destroy links

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

links.destroy <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/links/%s", uuid)

    # arvados.links.destroy

    f <- googleAuthR::gar_api_generator(url, "DELETE", data_parse_function = function(x) x)

    f()

}

#' get_permissions links

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}

#' 

#' @seealso \href{http://doc.arvados.org/api/index.html}{Google Documentation}

#' 

#' @details 

#' Authentication scopes used by this function are:

#' \itemize{

#'   \item https://api.curoverse.com/auth/arvados

#' }

#' 

#' Set \code{options(googleAuthR.scopes.selected = c(https://api.curoverse.com/auth/arvados)}

#' Then run \code{googleAuthR::gar_auth()} to authenticate.

#' See \code{\link[googleAuthR]{gar_auth}} for details. 

#' 

#' @param uuid 

#' @importFrom googleAuthR gar_api_generator

#' @export

links.get_permissions <- function(uuid) {

    url <- sprintf("https://qr1hi.arvadosapi.com/arvados/v1/permissions/%s", uuid)

    # arvados.links.get_permissions

    f <- googleAuthR::gar_api_generator(url, "GET", data_parse_function = function(x) x)

    f()

}

#' Gets a Group's metadata by UUID.

#' 

#' Autogenerated via \code{\link[googleAuthR]{gar_create_api_skeleton}}