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1
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digraph cwlgraph {
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2
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//rankdir=LR;
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3
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graph [compound=true];
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4
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5
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"#createsglf-wf.cwl-start" -> "#createsglf-wf.cwl/nchunks";
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6
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"#createsglf-wf.cwl/nchunks" -> "#createsglf-wf.cwl/getpaths";
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7
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"#fastj2cgf-wf.cwl/merge-tilelib" -> "#fastj2cgf-wf.cwl/merge-tilelib/mergedlib";
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8
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"#fastj2cgf-wf.cwl/merge-tilelib/mergedlib" -> "#fastj2cgf-wf.cwl-end";
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9
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"#fastj2cgf-wf.cwl/merge-tilelib/mergedlib" -> "#createcgf-wf.cwl-start";
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10
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"#fastj2cgf-wf.cwl/merge-tilelib/mergedlib" -> "#fastj2cgf-wf.cwl/getsglfsize";
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11
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"#fastj2cgf-wf.cwl/merge-tilelib/mergedlib" -> "#fastj2cgf-wf.cwl/sglf-sanity-check";
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12
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"#createnpy-wf.cwl/consolnpy" -> "#createnpy-wf.cwl/consolnpy/consolnpydir";
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13
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"#createnpy-wf.cwl/consolnpy/consolnpydir" -> "#createnpy-wf.cwl-end";
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14
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"#createsglf-wf.cwl-start" -> "#createsglf-wf.cwl/pathmax";
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15
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"#createsglf-wf.cwl/pathmax" -> "#createsglf-wf.cwl/getpaths";
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16
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"#fastj2cgf-wf.cwl/handle-cgfs" -> "#fastj2cgf-wf.cwl/handle-cgfs/dir";
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17
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"#fastj2cgf-wf.cwl/handle-cgfs/dir" -> "#fastj2cgf-wf.cwl-end";
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18
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"#fastj2cgf-wf.cwl/handle-sglfs/dirname" -> "#fastj2cgf-wf.cwl/handle-sglfs";
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19
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"#main-start" -> "#main/afn";
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20
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"#main/afn" -> "#check-cgf-gvcf-wf.cwl-start";
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21
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"#main-start" -> "#main/checkchroms";
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22
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"#main/checkchroms" -> "#check-cgf-gvcf-wf.cwl-start";
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23
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"#main-start" -> "#main/nchunks";
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24
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"#main/nchunks" -> "#fastj2cgf-wf.cwl-start";
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25
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"#createcgf-wf.cwl/createcgf" -> "#createcgf-wf.cwl/createcgf/cgf";
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26
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"#createcgf-wf.cwl/createcgf/cgf" -> "#createcgf-wf.cwl-end";
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27
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/checknum";
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28
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"#check-cgf-gvcf-wf.cwl/checknum" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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29
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"#fastj2cgf-wf.cwl-start" -> "#fastj2cgf-wf.cwl/pathmin";
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30
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"#fastj2cgf-wf.cwl/pathmin" -> "#createsglf-wf.cwl-start";
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31
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"#createnpy-wf.cwl/createnpy" -> "#createnpy-wf.cwl/createnpy/names";
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32
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"#createnpy-wf.cwl/createnpy/names" -> "#createnpy-wf.cwl-end";
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33
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"#fastj2cgf-wf.cwl-start" -> "#fastj2cgf-wf.cwl/pathmax";
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34
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"#fastj2cgf-wf.cwl/pathmax" -> "#createsglf-wf.cwl-start";
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35
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"#createsglf-wf.cwl/getpaths" -> "#createsglf-wf.cwl/getpaths/minpaths";
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36
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"#createsglf-wf.cwl/getpaths/minpaths" -> "#createsglf-wf.cwl/createsglf";
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37
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"#createcgf-wf.cwl-start" -> "#createcgf-wf.cwl/waitsignal";
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38
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"#main-start" -> "#main/chroms";
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39
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"#createsglf-wf.cwl-start" -> "#createsglf-wf.cwl/tagset";
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40
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"#createsglf-wf.cwl/tagset" -> "#createsglf-wf.cwl/createsglf";
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41
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/reffa";
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42
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"#check-cgf-gvcf-wf.cwl/reffa" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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43
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"#createsglf-wf.cwl-start" -> "#createsglf-wf.cwl/fjdir";
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44
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"#createsglf-wf.cwl/fjdir" -> "#createsglf-wf.cwl/createsglf";
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45
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/tileassembly";
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46
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"#check-cgf-gvcf-wf.cwl/tileassembly" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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47
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"#fastj2cgf-wf.cwl-start" -> "#fastj2cgf-wf.cwl/sglfthreshold";
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48
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"#fastj2cgf-wf.cwl/sglfthreshold" -> "#fastj2cgf-wf.cwl/getsglfsize";
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49
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"#fastj2cgf-wf.cwl/handle-sglfs" -> "#fastj2cgf-wf.cwl/handle-sglfs/dir";
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50
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"#fastj2cgf-wf.cwl/handle-sglfs/dir" -> "#fastj2cgf-wf.cwl/merge-tilelib";
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51
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"#createcgf-wf.cwl-start" -> "#createcgf-wf.cwl/lib";
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52
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"#createcgf-wf.cwl/lib" -> "#createcgf-wf.cwl/createcgf";
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53
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/cgfdir";
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54
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"#check-cgf-gvcf-wf.cwl/cgfdir" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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55
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/ref";
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56
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"#check-cgf-gvcf-wf.cwl/ref" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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57
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"#fastj2cgf-wf.cwl-end" -> "#main/fastj2cgf-wf/sglfsize";
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58
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"#main/fastj2cgf-wf/sglfsize" -> "#main-end";
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59
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"#fastj2cgf-wf.cwl-end" -> "#main/fastj2cgf-wf/skippaths";
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60
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"#main/fastj2cgf-wf/skippaths" -> "#main-end";
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61
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"#main-start" -> "#main/checknum";
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62
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"#main/checknum" -> "#check-cgf-gvcf-wf.cwl-start";
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63
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"#main-start" -> "#main/reffa";
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64
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"#main/reffa" -> "#check-cgf-gvcf-wf.cwl-start";
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65
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"#createsglf-wf.cwl/createsglf" -> "#createsglf-wf.cwl/createsglf/chunksglfs";
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66
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"#createsglf-wf.cwl/createsglf/chunksglfs" -> "#createsglf-wf.cwl-end";
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67
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"#check-cgf-gvcf-wf.cwl/check-cgf-gvcf" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf/gvcfhash";
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68
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"#check-cgf-gvcf-wf.cwl/check-cgf-gvcf/gvcfhash" -> "#check-cgf-gvcf-wf.cwl-end";
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69
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"#fastj2cgf-wf.cwl-start" -> "#fastj2cgf-wf.cwl/fjdir";
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70
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"#fastj2cgf-wf.cwl/fjdir" -> "#createcgf-wf.cwl-start";
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71
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"#fastj2cgf-wf.cwl/fjdir" -> "#createsglf-wf.cwl-start";
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72
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"#createsglf-wf.cwl-end" -> "#fastj2cgf-wf.cwl/createsglf-wf/sglfs";
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73
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"#fastj2cgf-wf.cwl/createsglf-wf/sglfs" -> "#fastj2cgf-wf.cwl/handle-sglfs";
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74
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"#fastj2cgf-wf.cwl-end" -> "#main/fastj2cgf-wf/cgfdir";
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75
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"#main/fastj2cgf-wf/cgfdir" -> "#main-end";
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76
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"#main/fastj2cgf-wf/cgfdir" -> "#check-cgf-gvcf-wf.cwl-start";
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77
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"#main/fastj2cgf-wf/cgfdir" -> "#createnpy-wf.cwl-start";
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78
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"#createnpy-wf.cwl-end" -> "#main/createnpy-wf/consolnpydir";
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79
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"#main/createnpy-wf/consolnpydir" -> "#main-end";
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80
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"#fastj2cgf-wf.cwl-start" -> "#fastj2cgf-wf.cwl/tagset";
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81
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"#fastj2cgf-wf.cwl/tagset" -> "#createsglf-wf.cwl-start";
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82
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"#createcgf-wf.cwl-end" -> "#fastj2cgf-wf.cwl/createcgf-wf/cgfs";
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83
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"#fastj2cgf-wf.cwl/createcgf-wf/cgfs" -> "#fastj2cgf-wf.cwl/handle-cgfs";
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84
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"#main-start" -> "#main/tagset";
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85
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"#main/tagset" -> "#fastj2cgf-wf.cwl-start";
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86
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"#createsglf-wf.cwl-start" -> "#createsglf-wf.cwl/pathmin";
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87
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"#createsglf-wf.cwl/pathmin" -> "#createsglf-wf.cwl/getpaths";
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88
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"#fastj2cgf-wf.cwl/getsglfsize" -> "#fastj2cgf-wf.cwl/getsglfsize/skippaths";
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89
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"#fastj2cgf-wf.cwl/getsglfsize/skippaths" -> "#fastj2cgf-wf.cwl-end";
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90
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"#fastj2cgf-wf.cwl/getsglfsize/skippaths" -> "#createcgf-wf.cwl-start";
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91
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"#main-start" -> "#main/pathmax";
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92
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"#main/pathmax" -> "#fastj2cgf-wf.cwl-start";
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93
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"#fastj2cgf-wf.cwl-end" -> "#main/fastj2cgf-wf/lib";
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94
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"#main/fastj2cgf-wf/lib" -> "#main-end";
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95
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"#main/fastj2cgf-wf/lib" -> "#check-cgf-gvcf-wf.cwl-start";
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96
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/sglfdir";
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97
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"#check-cgf-gvcf-wf.cwl/sglfdir" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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98
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"#fastj2cgf-wf.cwl-start" -> "#fastj2cgf-wf.cwl/nchunks";
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99
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"#fastj2cgf-wf.cwl/nchunks" -> "#createsglf-wf.cwl-start";
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100
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"#fastj2cgf-wf.cwl/getsglfsize" -> "#fastj2cgf-wf.cwl/getsglfsize/sglfsize";
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101
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"#fastj2cgf-wf.cwl/getsglfsize/sglfsize" -> "#fastj2cgf-wf.cwl-end";
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102
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"#fastj2cgf-wf.cwl/sglf-sanity-check" -> "#fastj2cgf-wf.cwl/sglf-sanity-check/log";
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103
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"#fastj2cgf-wf.cwl/sglf-sanity-check/log" -> "#createcgf-wf.cwl-start";
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104
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"#fastj2cgf-wf.cwl/handle-cgfs/dirname" -> "#fastj2cgf-wf.cwl/handle-cgfs";
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105
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"#createcgf-wf.cwl-start" -> "#createcgf-wf.cwl/fjdir";
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106
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"#createcgf-wf.cwl/fjdir" -> "#createcgf-wf.cwl/getdirs";
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107
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"#createcgf-wf.cwl-start" -> "#createcgf-wf.cwl/skippaths";
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108
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"#createcgf-wf.cwl/skippaths" -> "#createcgf-wf.cwl/createcgf";
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109
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/chroms";
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110
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"#check-cgf-gvcf-wf.cwl/chroms" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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111
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"#createnpy-wf.cwl-end" -> "#main/createnpy-wf/names";
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112
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"#main/createnpy-wf/names" -> "#main-end";
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113
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"#createsglf-wf.cwl/getpaths" -> "#createsglf-wf.cwl/getpaths/maxpaths";
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114
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"#createsglf-wf.cwl/getpaths/maxpaths" -> "#createsglf-wf.cwl/createsglf";
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115
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"#fastj2cgf-wf.cwl-start" -> "#fastj2cgf-wf.cwl/srclib";
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116
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"#fastj2cgf-wf.cwl/srclib" -> "#fastj2cgf-wf.cwl/merge-tilelib";
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117
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"#main-start" -> "#main/fjdir";
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118
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"#main/fjdir" -> "#fastj2cgf-wf.cwl-start";
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119
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"#createnpy-wf.cwl-start" -> "#createnpy-wf.cwl/waitsignal";
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120
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"#createnpy-wf.cwl-start" -> "#createnpy-wf.cwl/cgfdir";
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121
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"#createnpy-wf.cwl/cgfdir" -> "#createnpy-wf.cwl/createnpy";
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122
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"#createcgf-wf.cwl/getdirs" -> "#createcgf-wf.cwl/getdirs/fjdirs";
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123
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"#createcgf-wf.cwl/getdirs/fjdirs" -> "#createcgf-wf.cwl/createcgf";
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124
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"#check-cgf-gvcf-wf.cwl-start" -> "#check-cgf-gvcf-wf.cwl/gvcfdir";
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125
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"#check-cgf-gvcf-wf.cwl/gvcfdir" -> "#check-cgf-gvcf-wf.cwl/check-cgf-gvcf";
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126
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"#main-start" -> "#main/gvcfdir";
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127
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"#main/gvcfdir" -> "#check-cgf-gvcf-wf.cwl-start";
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128
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"#main-start" -> "#main/srclib";
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129
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"#main/srclib" -> "#fastj2cgf-wf.cwl-start";
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130
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"#check-cgf-gvcf-wf.cwl-end" -> "#main/check-cgf-gvcf-wf/gvcfhashes";
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131
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"#main/check-cgf-gvcf-wf/gvcfhashes" -> "#createnpy-wf.cwl-start";
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132
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"#createnpy-wf.cwl/createnpy" -> "#createnpy-wf.cwl/createnpy/npydir";
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133
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"#createnpy-wf.cwl/createnpy/npydir" -> "#createnpy-wf.cwl/consolnpy";
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134
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"#main-start" -> "#main/pathmin";
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135
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"#main/pathmin" -> "#fastj2cgf-wf.cwl-start";
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136
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"#main-start" -> "#main/ref";
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137
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"#main/ref" -> "#check-cgf-gvcf-wf.cwl-start";
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138
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"#main-start" -> "#main/sglfthreshold";
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139
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"#main/sglfthreshold" -> "#fastj2cgf-wf.cwl-start";
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140
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}
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