Bug #11075

Trying to copy a pipeline template to 9tee4 fails

Added by Bryan Cosca almost 2 years ago. Updated over 1 year ago.

Status:
New
Priority:
Normal
Assigned To:
-
Category:
-
Target version:
Start date:
02/08/2017
Due date:
% Done:

0%

Estimated time:
Story points:
-

Description

trying to copy a pipeline template to 9tee4

arv-copy --src qr1hi --dst 9tee4 --dst-git-repo sally/rochepred qr1hi-p5p6p-ybw72hvxjk6g4y1
Cloning into bare repository '/tmp/tmpRfdomz'...
remote: Counting objects: 99585, done.        
remote: Compressing objects: 100% (24934/24934), done.        
remote: Total 99585 (delta 72590), reused 96266 (delta 69648)        
Receiving objects: 100% (99585/99585), 20.66 MiB | 11.53 MiB/s, done.
Resolving deltas: 100% (72590/72590), done.
Checking connectivity... done.
Counting objects: 99542, done.
Delta compression using up to 4 threads.
Compressing objects: 100% (21991/21991), done.
error: RPC failed; result=22, HTTP code = 403
fatal: The remote end hung up unexpectedly
Writing objects: 100% (99542/99542), 20.66 MiB | 34.04 MiB/s, done.
Total 99542 (delta 72552), reused 99537 (delta 72548)
fatal: The remote end hung up unexpectedly
Everything up-to-date
Traceback (most recent call last):
  File "/home/bcosc/acr80-1-25/bin/arv-copy", line 4, in <module>
    main()
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/commands/arv_copy.py", line 147, in main
    src_arv, dst_arv, args)
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/commands/arv_copy.py", line 399, in copy_pipeline_template
    copy_git_repos(pt, src, dst, args.dst_git_repo, args)
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/commands/arv_copy.py", line 557, in copy_git_repos
    migrate_jobspec(component, src, dst, dst_repo, args)
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/commands/arv_copy.py", line 530, in migrate_jobspec
    copy_git_repo(repo, src, dst, dst_repo, script_version, args)
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/commands/arv_copy.py", line 855, in copy_git_repo
    "GIT_ASKPASS": "/bin/false"})
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/util.py", line 50, in run_command
    (execargs, p.returncode, stderrdata))
arvados.errors.CommandFailedError: run_command ['git', '-c', u'credential.https://git.9tee4.arvadosapi.com/.username=none', '-c', u'credential.https://git.9tee4.arvadosapi.com/.helper=!cred(){ cat >/dev/null; if [ "$1" = get ]; then echo password=$ARVADOS_API_TOKEN; fi; };cred', 'push', 'dst', 'https_git_qr1hi_arvadosapi_com_arvados_git_master'] exit 1:
None

History

#1 Updated by Bryan Cosca almost 2 years ago

  • Subject changed from Trying to copy a pipeline template to 9tee4 to Trying to copy a pipeline template to 9tee4 fails

#2 Updated by Bryan Cosca almost 2 years ago

(acr80-1-25)1!bcosc@bcosc.qr1hi:~/rochepred/exomeseqpipeline$ arv-copy --src qr1hi --dst 9tee4 --dst-git-repo sally/rochepred qr1hi-p5p6p-ybw72hvxjk6g4y1
Cloning into bare repository '/tmp/tmpRcvdDe'...
remote: Counting objects: 99585, done.        
remote: Compressing objects: 100% (24934/24934), done.        
remote: Total 99585 (delta 72592), reused 96264 (delta 69648)        
Receiving objects: 100% (99585/99585), 20.66 MiB | 9.41 MiB/s, done.
Resolving deltas: 100% (72592/72592), done.
Checking connectivity... done.
Counting objects: 99542, done.
Delta compression using up to 4 threads.
Compressing objects: 100% (21989/21989), done.
Writing objects: 100% (99542/99542), 20.66 MiB | 13.31 MiB/s, done.
Total 99542 (delta 72554), reused 99537 (delta 72550)
To https://git.9tee4.arvadosapi.com/sally/rochepred.git
 * [new branch]      https_git_qr1hi_arvadosapi_com_arvados_git_master -> https_git_qr1hi_arvadosapi_com_arvados_git_master
2017-02-08 15:33:17 arvados.arv-copy[23107] WARNING: Could not find docker image arvados/jobs:5ba9471d651c9f6235988d3ec680461ba4785453:latest
Traceback (most recent call last):
  File "/home/bcosc/acr80-1-25/bin/arv-copy", line 4, in <module>
    main()
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/commands/arv_copy.py", line 147, in main
    src_arv, dst_arv, args)
  File "/home/bcosc/acr80-1-25/local/lib/python2.7/site-packages/arvados/commands/arv_copy.py", line 410, in copy_pipeline_template
    return dst.pipeline_templates().create(body=pt, ensure_unique_name=True).execute(num_retries=args.retries)
AttributeError: 'Resource' object has no attribute 'create'

#3 Updated by Nico C├ęsar almost 2 years ago

9tee4 is a docker 1.13 version only cluster, see #10901

maybe this ticket will be relevant once #11017 gets resolved?

#4 Updated by Tom Morris over 1 year ago

  • Target version set to Arvados Future Sprints

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