Bug #11584

Allow "keep:" references on command line.

Added by Peter Amstutz almost 4 years ago. Updated 5 days ago.

Status:
New
Priority:
Normal
Assigned To:
Category:
CWL
Target version:
-
Start date:
Due date:
% Done:

0%

Estimated time:
(Total: 0.00 h)
Story points:
-

Description

arvados-cwl-runner lets you provide input parameter values on the command line. However, currently it assumes they are relative paths local files and doesn't allow you to use references to keep. This should be fixed to permit references to keep.

As a secondary problem, "file not found" when checking command line parameters results in a backtrace, rather being caught and printing a friendlier error message.


Subtasks

Task #17458: ReviewNew


Related issues

Related to Arvados Epics - Story #16011: Easier CWLIn Progress07/01/202007/01/2021

History

#1 Updated by Peter Amstutz almost 4 years ago

  • Subject changed from [CWL] Allow keep: references on command line. to [CWL] Allow "keep:" references on command line.
  • Description updated (diff)

#2 Updated by Peter Amstutz almost 4 years ago

  • Description updated (diff)

#3 Updated by Tom Morris over 3 years ago

  • Target version set to Arvados Future Sprints

#4 Updated by Peter Amstutz about 1 month ago

#5 Updated by Peter Amstutz about 1 month ago

  • Target version changed from Arvados Future Sprints to 2021-03-31 sprint
  • Assigned To set to Jiayong Li

#6 Updated by Peter Amstutz about 1 month ago

  • Category set to CWL
  • Subject changed from [CWL] Allow "keep:" references on command line. to Allow "keep:" references on command line.

#7 Updated by Jiayong Li about 1 month ago

  • Description updated (diff)

#8 Updated by Peter Amstutz 19 days ago

  • Target version changed from 2021-03-31 sprint to 2021-04-14 sprint

#9 Updated by Peter Amstutz 5 days ago

  • Target version changed from 2021-04-14 sprint to 2021-04-28 bughunt sprint

#10 Updated by Peter Amstutz 5 days ago

  • Target version deleted (2021-04-28 bughunt sprint)

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