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Bug #16140

closed

Running arvados-cwl-runner shows arvados/jobs:2.0.0 is not available

Added by Jiayong Li about 4 years ago. Updated about 4 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
-
Target version:
-
Story points:
-

Description

I'm running a workflow on lightning-dev1, and got the following error.

Error response from daemon: manifest for arvados/jobs:2.0.0 not found
ERROR Unhandled error, try again with --debug for more information:
  Docker image arvados/jobs:2.0.0 is not available
Command '['docker', 'pull', 'arvados/jobs:2.0.0']' returned non-zero exit status 1.


Files

fixnonref.cwl (1016 Bytes) fixnonref.cwl Jiayong Li, 02/07/2020 06:41 PM
fixnonref-wf.cwl (531 Bytes) fixnonref-wf.cwl Jiayong Li, 02/07/2020 06:41 PM
getfiles.cwl (493 Bytes) getfiles.cwl Jiayong Li, 02/07/2020 06:41 PM
fixnonref-wf-1kgvcf-batch1.yml (85 Bytes) fixnonref-wf-1kgvcf-batch1.yml Jiayong Li, 02/07/2020 06:41 PM
Actions #1

Updated by Jiayong Li about 4 years ago

Actions #3

Updated by Jiayong Li about 4 years ago

Command:

arvados-cwl-runner --api containers --submit --no-wait --submit-runner-ram 20000 --project-uuid su92l-j7d0g-wtl2x198sm0cff9 fixnonref-wf.cwl fixnonref-wf-1kgvcf-batch1.yml

Note that I didn't refer to the docker image arvados/jobs:2.0.0 explicitly, but some of my cwls don't specify docker image, I think it's referring to that by default.

Actions #4

Updated by Ward Vandewege about 4 years ago

  • Assigned To set to Ward Vandewege
  • Status changed from New to Resolved

I had used arv-keepdocker to upload the 2.0 image, but not into the correct project. I moved the image into the project by hand. That left the crucial links to that collection (which arvados uses to recognize docker images) owned by me, which meant that other users just didn't see the new image at all.

I updated the ownership of the links, and now it works.

Actions #5

Updated by Jiayong Li about 4 years ago

I'm running into this again

Command:

arvados-cwl-runner --api containers --submit --no-wait --submit-runner-ram 50000 --eval-timeout 10000 --thread-count 8 --project-uuid su92l-j7d0g-wj4a04wkokpds3i fastj2npy-wf.cwl yml/f6a856c388f6fbe9c4146741609bc5a6+5113266.yml

Error:

INFO ['docker', 'pull', 'arvados/jobs:2.0.1']
Error response from daemon: manifest for arvados/jobs:2.0.1 not found
ERROR Unhandled error, try again with --debug for more information:
  Docker image arvados/jobs:2.0.1 is not available
Command '['docker', 'pull', 'arvados/jobs:2.0.1']' returned non-zero exit status 1.

Actions #6

Updated by Peter Amstutz about 4 years ago

Jiayong Li wrote:

I'm running into this again

Command:
[...]

Error:
[...]

Sorry about that, this is fixed, a new image needs to be uploaded every time there's a new release candidate.

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