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Bug #17521

closed

Handling of ./ in arvados-cwl-runner

Added by Sarah Zaranek over 3 years ago. Updated over 3 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Peter Amstutz
Category:
CWL
Target version:
2021-04-28 bughunt sprint
Story points:
-
Release:
Arvados 2.2.0
Release relationship:
Auto

Description

Details:

Arvados kept erroring on me that I have more than 1 file fitting the description by my glob (using ./dir/*.html). I thought was odd since it only contained 1 file. I put a File array as output, it works, and lo and behold pulls 1 file

https://workbench.su92l.arvadosapi.com/container_requests/su92l-xvhdp-2duf0p33vsn4q07
https://workbench.su92l.arvadosapi.com/container_requests/su92l-xvhdp-rzbwrhcwfu70dg4

/dir/*.html gives the appropriate error
using dir/*.html worked like you would expect

from Peter -- "at any rate, not handling a leading `./` correctly does seem to be an arvados-cwl-runner bug"

Related issues 1 (0 open — 1 closed)

Related to Arvados - Bug #10308: Output glob "./" doesn't work as output from CWL workflowResolvedPeter Amstutz10/20/2016Actions
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 #1

Updated by Peter Amstutz over 3 years ago

  • Target version set to 2021-04-28 bughunt sprint
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 #2

Updated by Peter Amstutz over 3 years ago

  • Related to Bug #10308: Output glob "./" doesn't work as output from CWL workflow added
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 #3

Updated by Peter Amstutz over 3 years ago

  • Assigned To set to Peter Amstutz
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 #4

Updated by Peter Amstutz over 3 years ago

  • Status changed from New to In Progress
  • Category set to CWL
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 #5

Updated by Peter Amstutz over 3 years ago

  • Status changed from In Progress to Resolved
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 #6

Updated by Peter Amstutz over 3 years ago

  • Release set to 38
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