Bug #17521

Handling of ./ in arvados-cwl-runner

Added by Sarah Zaranek 9 months ago. Updated 8 months ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
CWL
Start date:
Due date:
% Done:

0%

Estimated time:
Story points:
-
Release relationship:
Auto

Description

Details:

Arvados kept erroring on me that I have more than 1 file fitting the description by my glob (using ./dir/*.html). I thought was odd since it only contained 1 file. I put a File array as output, it works, and lo and behold pulls 1 file

https://workbench.su92l.arvadosapi.com/container_requests/su92l-xvhdp-2duf0p33vsn4q07
https://workbench.su92l.arvadosapi.com/container_requests/su92l-xvhdp-rzbwrhcwfu70dg4

/dir/*.html gives the appropriate error
using dir/*.html worked like you would expect

from Peter -- "at any rate, not handling a leading `./` correctly does seem to be an arvados-cwl-runner bug"


Related issues

Related to Arvados - Bug #10308: Output glob "./" doesn't work as output from CWL workflowResolved10/20/2016

Associated revisions

Revision a7f0aa8f (diff)
Added by Peter Amstutz 9 months ago

17521: Add tests, refs #10380 and refs #17521

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <>

Revision 267d3c40
Added by Peter Amstutz 9 months ago

Merge branch '17521-dot-slash-glob' refs #17521

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <>

History

#1 Updated by Peter Amstutz 9 months ago

  • Target version set to 2021-04-28 bughunt sprint

#2 Updated by Peter Amstutz 9 months ago

  • Related to Bug #10308: Output glob "./" doesn't work as output from CWL workflow added

#3 Updated by Peter Amstutz 9 months ago

  • Assigned To set to Peter Amstutz

#4 Updated by Peter Amstutz 9 months ago

  • Status changed from New to In Progress
  • Category set to CWL

#5 Updated by Peter Amstutz 9 months ago

  • Status changed from In Progress to Resolved

#6 Updated by Peter Amstutz 8 months ago

  • Release set to 38

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