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Idea #17755

closed

Test singularity support on a cloud cluster by running some real workflows

Added by Peter Amstutz almost 3 years ago. Updated over 2 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
Crunch
Target version:
Story points:
-
Release relationship:
Auto

Description

On a cloud cluster with singularity enabled (requires new compute image + config changes), run the the WGS workflow with small chr19 inputs, eg pirca-xvhdp-m4r8n9qmoh5ggra


Subtasks 1 (0 open1 closed)

Task #17796: ReviewResolvedLucas Di Pentima09/03/2021Actions

Related issues

Related to Arvados - Idea #17296: Singularity proof of conceptResolvedTom Clegg05/27/2021Actions
Related to Arvados Epics - Idea #16305: Singularity supportResolved01/01/202109/30/2021Actions
Related to Arvados - Bug #18027: [crunch-run] upload failed (singularity)ResolvedTom Clegg09/03/2021Actions
Related to Arvados - Bug #18026: [singularity] crunch-run image cache race conditionResolvedPeter Amstutz08/24/2021Actions
Blocked by Arvados - Bug #17816: singularity not setting working directoryResolvedPeter Amstutz07/14/2021Actions
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