Bug #17801

Cannot use $(runtime.outdir) for outputBinding glob

Added by Peter Amstutz 6 months ago. Updated 5 months ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
CWL
Target version:
Start date:
06/18/2021
Due date:
% Done:

100%

Estimated time:
(Total: 0.00 h)
Story points:
-
Release relationship:
Auto

Description

User reported regression, was using $(runtime.outdir) to capture the output directory, but this no longer works in 2.2.


Subtasks

Task #17824: Review 17801-runtime-outdir ResolvedPeter Amstutz

Associated revisions

Revision d063c8fc
Added by Peter Amstutz 5 months ago

Merge branch '17801-runtime-outdir' refs #17801

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <>

History

#1 Updated by Peter Amstutz 6 months ago

  • Description updated (diff)

#2 Updated by Peter Amstutz 6 months ago

  • Assigned To set to Peter Amstutz

#4 Updated by Peter Amstutz 5 months ago

  • Status changed from New to In Progress

#5 Updated by Michael Crusoe 5 months ago

Peter Amstutz wrote:

User reported regression, was using $(runtime.outdir) to capture the output directory, but this no longer works in 2.2.

Please file tickets requesting new conformance tests for all discovered regressions related to CWL.

Example: https://github.com/common-workflow-language/cwl-v1.2/issues/109

#6 Updated by Nico C├ęsar 5 months ago

review @ 8655bd8d309537ee7bb9c696c909ebffe3501483 17801-runtime-outdir

The 1-line change and test look good to me.

I tried to understand a little more about the case that rest will be ".", it seems that having "/." in the path will cause this to happen and being innocuous

Ready to merge

#7 Updated by Peter Amstutz 5 months ago

  • Status changed from In Progress to Resolved

#8 Updated by Peter Amstutz 5 months ago

  • Release set to 39

Also available in: Atom PDF