Support #18320

Run chr19 WGS test on ce8i5 to test compute-local keepstore

Added by Peter Amstutz 3 months ago. Updated about 2 months ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
Keep
Target version:
Start date:
Due date:
% Done:

0%

Estimated time:
Story points:
-
Release relationship:
Auto

Related issues

Related to Arvados - Bug #18385: arvados-server config-dump | arvados-server config-check -config=- spurious warningsNew

Related to Arvados - Bug #18387: [keepstore] reports incorrect version number `dev` when run on the compute nodeResolved11/16/2021

History

#1 Updated by Peter Amstutz 3 months ago

  • Release set to 46

#2 Updated by Peter Amstutz 2 months ago

  • Assigned To set to Ward Vandewege

#4 Updated by Peter Amstutz 2 months ago

https://workbench.ce8i5.arvadosapi.com/container_requests/ce8i5-xvhdp-acx2obioca1f3ir#Log

"not starting a local keepstore process because a volume (ce8i5-nyw5e-000000000000000) uses AccessViaHosts"

#5 Updated by Ward Vandewege 2 months ago

Ward Vandewege wrote:

Running at https://workbench.ce8i5.arvadosapi.com/container_requests/ce8i5-xvhdp-ynpn9xq8armkqji

Right, as Peter pointed out, the ce8i5 config prevents the use of the compute-local keepstore. The run completed successfully though, the fallback works!

2021-11-15T22:11:26.359086888Z not starting a local keepstore process because a volume (ce8i5-nyw5e-000000000000000) uses AccessViaHosts

I've updated the config file accordingly (and set `LocalKeepLogsToContainerLog: "errors"`) and restarted a run:

https://workbench2.ce8i5.arvadosapi.com/processes/ce8i5-xvhdp-8auzmly9tq9w1t5 (whoops, forgot to disable reuse)

Again:

https://workbench2.ce8i5.arvadosapi.com/processes/ce8i5-xvhdp-u7spu815w9n2q33

#6 Updated by Peter Amstutz 2 months ago

There's a bunch of warnings like this:

2021-11-16T18:06:02.084497419Z {"level":"warning","msg":"deprecated or unknown config entry: Clusters.ce8i5.InstanceTypes.a1v2.Scratch","time":"2021-11-16T18:06:01.863061954Z"}

Is that because the config file actually has a bunch of deprecated keys?

#7 Updated by Ward Vandewege 2 months ago

  • Related to Bug #18385: arvados-server config-dump | arvados-server config-check -config=- spurious warnings added

#8 Updated by Ward Vandewege 2 months ago

  • Related to Bug #18387: [keepstore] reports incorrect version number `dev` when run on the compute node added

#9 Updated by Ward Vandewege 2 months ago

Peter Amstutz wrote:

There's a bunch of warnings like this:

2021-11-16T18:06:02.084497419Z {"level":"warning","msg":"deprecated or unknown config entry: Clusters.ce8i5.InstanceTypes.a1v2.Scratch","time":"2021-11-16T18:06:01.863061954Z"}

Is that because the config file actually has a bunch of deprecated keys?

No, it's a bug, see #18385. Also, keepstore reports an incorrect version which is a separate bug, #18387.

#10 Updated by Ward Vandewege 2 months ago

Ward Vandewege wrote:

https://workbench2.ce8i5.arvadosapi.com/processes/ce8i5-xvhdp-u7spu815w9n2q33

That run completed successfully as well.

#11 Updated by Ward Vandewege about 2 months ago

  • Status changed from New to Resolved

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