Arvados

b198eda19443c899602fb11d800a999ccd3521a8

2.7-developer-run-tests: #5

re-run: 2.7-developer-run-tests-apps-workbench-integration: #3

arvados-workbench2|ba244d0282e8dc6c21ebf6a509750717bae35783

developer-tests-workbench2: #1391

2.7.1~rc1-1

arvados|b198eda19443c899602fb11d800a999ccd3521a8

arvados-workbench2|ba244d0282e8dc6c21ebf6a509750717bae35783

2.7-developer-run-tests: #6

developer-tests-workbench2: #1400

2.7.1~rc1-1

arvados|d53b38d1fa91725b10c7359278e52a7f2f6a15db

arvados-workbench2|ba244d0282e8dc6c21ebf6a509750717bae35783

2.7-developer-run-tests: #7

developer-tests-workbench2: #1403

2.7.1~rc1-1

arvados|1dd06b9c849b4cf20b6f21e6004d5b11234cf348

arvados-workbench2|ba244d0282e8dc6c21ebf6a509750717bae35783

2.7-developer-run-tests: #8

developer-tests-workbench2: #1405

build-and-publish-rc-packages: #204

workbench2-build-release-candidate-package: #133

centos 7 error:

16:20:39 Installing pg 1.5.4 with native extensions
16:20:40 Gem::Ext::BuildError: ERROR: Failed to build gem native extension.
16:20:40 
16:20:40     current directory: /usr/local/rvm/gems/ruby-2.7.2/gems/pg-1.5.4/ext
16:20:40 /usr/local/rvm/rubies/ruby-2.7.2/bin/ruby -I
16:20:40 /usr/local/rvm/rubies/ruby-2.7.2/lib/ruby/2.7.0 -r
16:20:40 ./siteconf20231206-13-1ngyg3s.rb extconf.rb
16:20:40 Calling libpq with GVL unlocked
16:20:40 checking for pg_config... yes
16:20:40 Using config values from /usr/bin/pg_config
16:20:40 Using libpq from /usr/lib64
16:20:40 checking for libpq-fe.h... yes
16:20:40 checking for libpq/libpq-fs.h... yes
16:20:40 checking for pg_config_manual.h... yes
16:20:40 checking for PQconnectdb() in -lpq... yes
16:20:40 checking for PQconninfo() in libpq-fe.h... no
16:20:40 Your PostgreSQL is too old. Either install an older version of this gem or
16:20:40 upgrade your database to at least PostgreSQL-9.3.

rocky 8 error:

16:23:35 Installing zlib 3.0.0 with native extensions
16:23:35 Gem::Ext::BuildError: ERROR: Failed to build gem native extension.
16:23:35 
16:23:35     current directory: /usr/local/rvm/gems/ruby-2.7.2/gems/zlib-3.0.0/ext/zlib
16:23:35 /usr/local/rvm/rubies/ruby-2.7.2/bin/ruby -I
16:23:35 /usr/local/rvm/rubies/ruby-2.7.2/lib/ruby/2.7.0 -r
16:23:35 ./siteconf20231206-13-1isgqwl.rb extconf.rb
16:23:35 checking for deflateReset() in -lz... yes
16:23:35 checking for zlib.h... yes
16:23:35 checking for crc32_combine() in zlib.h... yes
16:23:35 checking for adler32_combine() in zlib.h... yes
16:23:35 checking for z_crc_t in zlib.h... yes
16:23:35 checking for z_size_t in zlib.h... yes
16:23:35 creating Makefile
16:23:35 
16:23:35 current directory: /usr/local/rvm/gems/ruby-2.7.2/gems/zlib-3.0.0/ext/zlib
16:23:35 make --jobs $(grep -c processor /proc/cpuinfo) "DESTDIR=" clean
16:23:35 
16:23:35 current directory: /usr/local/rvm/gems/ruby-2.7.2/gems/zlib-3.0.0/ext/zlib
16:23:35 make --jobs $(grep -c processor /proc/cpuinfo) "DESTDIR=" 
16:23:35 compiling zlib.c
16:23:35 zlib.c:16:11: fatal error: valgrind/memcheck.h: No such file or directory
16:23:35  # include <valgrind/memcheck.h>
16:23:35            ^~~~~~~~~~~~~~~~~~~~~
16:23:35 compilation terminated.
16:23:35 make: *** [Makefile:245: zlib.o] Error 1
16:23:35 
16:23:35 make failed, exit code 2

Peter Amstutz wrote in #note-9:

rocky 8 error:

This is the same error as #21028. Maybe pick fe8da34676be7c6fbb1042fcfcabee19bfa424d0 and 7a26b8b5d6691e51647dda8a1c4a73abf3b3c097?

Cherry picked some additional fixes for rocky 8:

build-publish-packages-testing-rocky8: #7

2.7.1~rc1-1

arvados|8d8328c0715408ab888cd050039cd90e2de9ba96

arvados-workbench2|ba244d0282e8dc6c21ebf6a509750717bae35783

developer-tests-workbench2: #1406

build-and-publish-rc-packages: #208

build-publish-packages-testing-centos7: #208

workbench2-build-release-candidate-package: #134

2.7.1~rc2-1

The rc1 builds are messy so let's see if we can build a clean rc2:

arvados|8d8328c0715408ab888cd050039cd90e2de9ba96

arvados-workbench2|2c7f44ed77a3df21088ec608f6a5d58dd7f65518

developer-tests-workbench2: #1407

build-and-publish-rc-packages: #209

workbench2-build-release-candidate-package: #138

docker-jobs-image-release: #64

test-provision: #740

packer-build-compute-image: #243

Blockers:

• live logs not showing up on pirca -- configuration issue, resolved
• search panel layout issue -- in progress (#21280)
• if we're merging workbench fixes at the last minute, we can include the log sorting issue as well (#21204)

Same for ouptuts --

for instance this output is showing up --

https://workbench.pirca.arvadosapi.com/collections/pirca-4zz18-69a1mjjzi54ju37

This jobs is showing odd things for subprocess -- the graphs says there are 156 but none are listed below:
https://workbench.pirca.arvadosapi.com/processes/pirca-xvhdp-llbg30zqukrb942

Actually it was just so slow that it tooks over a minute for them to show up :(

It also puts the "No subprocesses available for listing.

The current process may not have any or none matches current filtering." while waiting which really seems off

It might be ok, the internal icon is 16x24 which is the same as the trashcan but the copy is 24 x 24 perhaps that is my visual issue.

2.7.1~rc3-1

arvados|0016f27e081fbe853fcb64f67a4f5930f75488b7

arvados-workbench2|bf64b82d45ef695c312b08b663311f4da7b7a4e3

2.7-developer-run-tests: #12

developer-tests-workbench2: #1414

build-and-publish-rc-packages: #210

workbench2-build-release-candidate-package: #139

docker-jobs-image-release: #65

https://workbench.pirca.arvadosapi.com/processes/pirca-xvhdp-6sncuiyzzoaa5r2

2.7.1-1

arvados|0016f27e081fbe853fcb64f67a4f5930f75488b7

arvados-workbench2|bf64b82d45ef695c312b08b663311f4da7b7a4e3

build-and-publish-rc-packages: #211

workbench2-build-release-candidate-package: #140

workbench2-build-release-candidate-package: #141 (previous one was missing rocky8 build)

docker-jobs-image-release: #66

publish-packages-to-stable-repo: #275 (buster bullseye focal bionic)

publish-packages-to-stable-repo: #277 (centos7 rocky8)

build-package-r: #27

build-publish-packages-python-ruby: #79

build-and-release-docker-arvbox-demo-image: #56