Arvados

root@tordo:/var/www/arvados-api/shared/log# dpkg-reconfigure arvados-api-server

Assumption: nginx is configured to serve Rails from
            /var/www/arvados-api/current
Assumption: nginx and passenger run as www-data

Creating symlinks to configuration in /etc/arvados/api ...... done.
Installing bundler... done.
Running bundle config set --local path /var/www/arvados-api/shared/vendor_bundle... done.
Installing bundle gems...Successfully installed test-unit-3.6.1
Parsing documentation for test-unit-3.6.1
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Successfully installed public_suffix-5.0.4
Parsing documentation for public_suffix-5.0.4
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Successfully installed railties-7.0.8.1
Parsing documentation for railties-7.0.8.1
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Building native extensions. This could take a while...
Successfully installed byebug-11.1.3
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Successfully installed mini_mime-1.1.5
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Building native extensions. This could take a while...
Successfully installed ffi-1.15.5
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Parsing documentation for sprockets-4.2.1
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Successfully installed thor-1.3.1
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Successfully installed arvados-2.7.0.rc2
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Successfully installed activemodel-7.0.8.1
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Successfully installed activestorage-7.0.8.1
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Successfully installed rb-inotify-0.10.1
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Building native extensions. This could take a while...
Successfully installed json-2.6.3
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Successfully installed jwt-1.5.6
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Successfully installed rb-fsevent-0.11.2
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Successfully installed actionmailbox-7.0.8.1
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Successfully installed mini_portile2-2.8.5
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Successfully installed activesupport-7.0.8.1
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Building native extensions. This could take a while...
Successfully installed nio4r-2.7.1
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Building native extensions. This could take a while...
Successfully installed racc-1.7.3
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Successfully installed actionpack-7.0.8.1
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Building native extensions. This could take a while...
Successfully installed ruby-prof-1.6.3
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Building native extensions. This could take a while...
Successfully installed oj-3.16.1
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Successfully installed faraday-net_http-3.0.2
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Successfully installed googleauth-1.9.2
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Successfully installed pg-1.5.4
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Successfully installed acts_as_api-1.0.1
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Building native extensions. This could take a while...
Successfully installed websocket-driver-0.7.6
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Successfully installed mail-2.8.1
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Successfully installed tzinfo-2.0.6
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Successfully installed mocha-2.1.0
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Successfully installed responders-3.1.0
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Building native extensions. This could take a while...
Successfully installed date-3.3.4
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Successfully installed rails-perftest-0.0.7
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Successfully installed activejob-7.0.8.1
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Successfully installed base64-0.2.0
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Successfully installed listen-3.8.0
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Successfully installed factory_bot-6.2.1
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Successfully installed extlib-0.9.16
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Successfully installed zlib-3.1.0
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Successfully installed timeout-0.4.1
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Successfully installed simplecov_json_formatter-0.1.4
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Successfully installed nokogiri-1.15.6-x86_64-linux
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Successfully installed webrick-1.8.1
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Successfully installed net-pop-0.1.2
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Successfully installed httpclient-2.8.3
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Successfully installed arvados-google-api-client-0.8.7.6
Parsing documentation for arvados-google-api-client-0.8.7.6
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Building native extensions. This could take a while...
Successfully installed passenger-6.0.18
Parsing documentation for passenger-6.0.18
Done installing documentation for passenger after 20 seconds
102 gems installed
 done.
Running bundle install...Don't run Bundler as root. Installing your bundle as root will break this application for all non-root users on this machine.
 done.
Verifying bundle is complete... done.
Ensuring directory and file permissions ...chown: cannot access '/var/www/arvados-api/current/db/schema.rb': No such file or directory
... done.
Warning: Database is not ready to set up. Skipping database setup.
Checking configuration for completeness...rake aborted!
LoadError: incompatible library version - /var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/date-3.3.4/lib/date_core.so
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/date-3.3.4/lib/date.rb:4:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/date-3.3.4/lib/date.rb:4:in `<top (required)>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/activesupport-7.0.8.1/lib/active_support/messages/metadata.rb:3:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/activesupport-7.0.8.1/lib/active_support/messages/metadata.rb:3:in `<top (required)>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/activesupport-7.0.8.1/lib/active_support/message_verifier.rb:7:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/activesupport-7.0.8.1/lib/active_support/message_verifier.rb:7:in `<top (required)>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/railties-7.0.8.1/lib/rails/application.rb:7:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/railties-7.0.8.1/lib/rails/application.rb:7:in `<top (required)>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/railties-7.0.8.1/lib/rails.rb:13:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.7.0/gems/railties-7.0.8.1/lib/rails.rb:13:in `<top (required)>'
/var/www/arvados-api/current/config/application.rb:7:in `require'
/var/www/arvados-api/current/config/application.rb:7:in `<top (required)>'
/var/www/arvados-api/current/Rakefile:9:in `require'
/var/www/arvados-api/current/Rakefile:9:in `<top (required)>'
(See full trace by running task with --trace)
 failed.

PLEASE NOTE:

The arvados-api-server package was not configured completely because
/etc/arvados/config.yml needs some tweaking.
Please refer to the documentation at
<http://doc.arvados.org/install/install-api-server.html#configure> for more details.

When config.yml has been modified,
reconfigure or reinstall this package.