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Bug #3124

closed

[API] Job creation 'filters' chokes on invalid commit hash

Added by Peter Amstutz almost 10 years ago. Updated almost 10 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Brett Smith
Category:
API
Target version:
2014-08-06 Sprint
Story points:
1.0

Description

I went to run a job which had an invalid commit hash in "minimum_script_version". Instead of reporting the error directly or ignoring the invalid hash, it fails downstream because the commit hash resolves to 'nil':

2014-06-30_15:02:13.08383 arv-run-pipeline-instance 4399: create job: ["#<ArgumentError: Invalid operand type 'NilClass' fo
r 'in' operator in filters>"] with attributes {:script=>"run-command", :script_parameters=>{:command=>["java", "-Xmx8g", "-
jar", "$(dir $(picard))/CreateSequenceDictionary.jar", "R=$(file $(fasta))", "O=$(basename $(fasta)).dict"], :fasta=>"27793
0109b2dfec9412d489332784605+2009/human_g1k_v37.fasta", :picard=>"88447c464574ad7f79e551070043f9a9+1970"}, :script_version=>
"master", :repository=>"arvados", :nondeterministic=>nil, :output_is_persistent=>false, :runtime_constraints=>{:docker_imag
e=>"arvados/jobs-bwa-samtools"}, :owner_uuid=>"4xphq-tpzed-d6gnynp5uioqnxo", :minimum_script_version=>"96023b1eb656979a4e0e
87f80818f23d23511c1e", :exclude_script_versions=>nil, :no_reuse=>nil}
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