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Story #3254

closed

[Documentation] Add a "run one of the sample crunch scripts in local/development mode from your VM" tutorial

Added by Tom Clegg over 9 years ago. Updated over 9 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
-
Target version:
Start date:
08/11/2014
Due date:
% Done:

100%

Estimated time:
(Total: 8.00 h)
Story points:
1.0

Description

No creating git repositories, pushing, etc. -- just log in to VM, clone the arvados repository, and use one of the crunch scripts already included there. arv-get the output to show it in the terminal (or cat it using the keep fuse mount). Then edit the script and run it again.

Goal is to show how to do quick iterations with a crunch job on small inputs, without a lot of git machinations and waiting for compute workers to be available.


Subtasks 1 (0 open1 closed)

Task #3275: Split "writing a crunch script" into before-push and after-push stagesResolvedPeter Amstutz08/11/2014

Actions
Actions #1

Updated by Tom Clegg over 9 years ago

  • Subject changed from [Documentation] Wiki has the second tutorial: running one of the bundled crunch jobs in dev mode in a VM to [Documentation] Add a "run one of the sample crunch scripts in local/development mode from your VM" tutorial
Actions #2

Updated by Tim Pierce over 9 years ago

  • Assigned To set to Tim Pierce
Actions #3

Updated by Tom Clegg over 9 years ago

  • Description updated (diff)
Actions #4

Updated by Peter Amstutz over 9 years ago

To some extent this already exists: http://doc.arvados.org/user/topics/tutorial-job-debug.html

However I see the benefit to reorganizing/refactoring http://doc.arvados.org/user/tutorials/tutorial-firstscript.html and http://doc.arvados.org/user/topics/tutorial-job-debug.html so that it presents how to write and run a script using arv-crunch-job first and then talks about how use git and submit jobs to the cluster.

Actions #5

Updated by Tom Clegg over 9 years ago

  • Assigned To changed from Tim Pierce to Peter Amstutz
Actions #6

Updated by Peter Amstutz over 9 years ago

  • Status changed from New to In Progress
Actions #7

Updated by Tom Clegg over 9 years ago

Just two comments:

  • In /user/tutorials/tutorial-firstscript.html, a typo: reproducibilty → reproducibility
  • Perhaps out of scope but we really should stop saying "parallel" all over the place when we mean "concurrent".
Actions #8

Updated by Ward Vandewege over 9 years ago

  • Target version changed from 2014-08-06 Sprint to 2014-08-27 Sprint
Actions #9

Updated by Anonymous over 9 years ago

  • Status changed from In Progress to Resolved

Applied in changeset arvados|commit:872cf2e096a7b72722aa76040339a23e962cdf96.

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