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Bug #3432

closed

Uploading files into docker image using keep

Added by Bryan Cosca almost 10 years ago. Updated about 7 years ago.

Status:
Closed
Priority:
Normal
Assigned To:
-
Category:
SDKs
Target version:
-
Story points:
1.0

Description

$ arv-get 2e98fdc8e90f4c48a0714b711767c9ce+76
. 3163cbeef8fd50d8cb85096758b801a3+12404311+A6fa27b2185f6c706df383c4e832c23d23b65c008@53ecda1b 0:12404311:GenomeAnalysisTK.jar

In docker:

root@a9ede8e37919:/# arv-get 2e98fdc8e90f4c48a0714b711767c9ce+76/ .
Traceback (most recent call last):
  File "/usr/local/bin/arv-get", line 197, in <module>
    for data in f.readall():
  File "/usr/local/lib/python2.7/dist-packages/arvados/stream.py", line 155, in readall
    data = self.read(size)
  File "/usr/local/lib/python2.7/dist-packages/arvados/stream.py", line 139, in read
    data += self._stream.readfrom(locator+segmentoffset, segmentsize)
  File "/usr/local/lib/python2.7/dist-packages/arvados/stream.py", line 265, in readfrom
    data += self._keep.get(locator)[segmentoffset:segmentoffset+segmentsize]
  File "/usr/local/lib/python2.7/dist-packages/arvados/keep.py", line 432, in get
    raise arvados.errors.NotFoundError("Block not found: %s" % expect_hash)
arvados.errors.NotFoundError: Block not found: 3163cbeef8fd50d8cb85096758b801a3
root@a9ede8e37919:/# arv-get 2e98fdc8e90f4c48a0714b711767c9ce+76/  
usage: arv-get [-h] [--progress | --no-progress | --batch-progress]
               [--hash HASH | --md5sum] [-n] [-r] [-f | --skip-existing]
               locator [destination]
arv-get: error: Destination is not a directory.

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