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Feature #477
closedIntegrate trait-o-matic functionality into GET-Evidence
Story points:
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Description
GET-Evidence should subsume:
- Directory of public genomes (like Trait-o-matic front page http://snp.med.harvard.edu)
- Genome report page (like Trait-o-matic "view results")
PGP genome data should be imported directly/automatically from the "PGP profiles" site, rather than uploaded from a web form.
Trait-o-matic core (dbsnp lookups, nsSNP calls, and external variant db xrefs) should be ported to a warehouse mr-function to improve throughput and allow many genomes to be processed in parallel.
Trait-o-matic's "manual processing" features should be accessed through the data processing system using warehouse processing facilities:- Upload GFF (or provide warehouse locator, etc.)
- View job status/results
- Reprocess job
Updated by Ward Vandewege about 13 years ago
- Project changed from 19 to GET-Evidence
- Category deleted (
GET-Evidence)
Updated by Madeleine Ball about 13 years ago
- Status changed from New to Closed
Mission Accomplished.
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