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Idea #4783

closed

[CWL] Implement CWL prototype workflow runner

Added by Peter Amstutz over 9 years ago. Updated about 9 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
-
Target version:
Start date:
03/10/2015
Due date:
Story points:
2.0

Description

Implement a standalone pipeline runner for the common workflow language reference implementation. It will support all features agreed upon by the CWL community and be able to run all valid CWL pipelines which fit on a single node. This includes running tools in docker, passing output from one stage as input to the next stage, and implicit iteration/fanout.

Not including Arvados integration.


Subtasks 1 (0 open1 closed)

Task #5431: Implement workflow runner and add testsResolvedPeter Amstutz03/10/2015Actions

Related issues

Related to Arvados - Idea #4685: [Crunch] CWL prototype workflow runner in ArvadosResolvedPeter Amstutz04/07/2015Actions
Related to Arvados - Idea #4687: [Crunch] Support Brad Chapman to port bcbio tools and workflows to CWLResolvedPeter Amstutz01/12/2015Actions
Actions #1

Updated by Peter Amstutz over 9 years ago

  • Description updated (diff)
Actions #2

Updated by Peter Amstutz over 9 years ago

  • Assigned To set to Peter Amstutz
Actions #3

Updated by Tom Clegg over 9 years ago

  • Target version changed from 2015-01-07 sprint to Arvados Future Sprints
Actions #4

Updated by Peter Amstutz about 9 years ago

  • Target version changed from Arvados Future Sprints to 2015-03-11 sprint
Actions #5

Updated by Peter Amstutz about 9 years ago

  • Subject changed from [CWL] Implement workflow runner for CWL to [CWL] Implement CWL prototype workflow runner
  • Description updated (diff)
Actions #6

Updated by Peter Amstutz about 9 years ago

  • Status changed from New to In Progress
Actions #7

Updated by Peter Amstutz about 9 years ago

  • Status changed from In Progress to Resolved
Actions

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