Actions
Feature #489
closedFix PharmGKB analysis so it matches against all SNPs, not just the nsSNPs
Story points:
-
Updated by Madeleine Ball almost 14 years ago
You can get PharmGKB data from here (but it does not seem necessary to request the full XML dump at this time):
A flat file with variant annotations is provided by (this is the only data required for this task):
Please note that PharmGKB should be an external resource in GET-Evidence there is probably little sense in tweaking Trait-o-matic!
Updated by Tom Clegg almost 14 years ago
- Status changed from New to Closed
- Resolution set to wontfix
Now that all PharmGKB variants are in GET-E, and GET-E matches on all SNPs, this is a non-issue.
Updated by Ward Vandewege about 13 years ago
- Project changed from 19 to GET-Evidence
- Category deleted (
GET-Evidence)
Actions