Story #5056

Lightning deployment plan / Uploading data specifications

Added by Abram Connelly over 4 years ago. Updated over 1 year ago.

Status:
Closed
Priority:
Normal
Assigned To:
Sarah Guthrie
Start date:
01/22/2015
Due date:
% Done:

0%

Estimated time:
Story points:
0.5

Description

Investigate the steps involved from going from 'raw' data to a running Lightning instance.

A possible pipeline is:

- Ingest FASTQ and convert to gVCF/GFF
- Convert to Lightning format/tiles
- Construst the tile library
- Construct the CGF files
- Create running Lightning endpoint server

The end goal is to have a cohesive idea on what's involved at each step and to come up with a plan on how to implement.


Related issues

Related to Lightning - Story #5590: Document Lightning SpecificationsClosed09/15/2015

History

#1 Updated by Abram Connelly over 4 years ago

  • Target version set to 2015-02-13 sprint

#2 Updated by Abram Connelly over 4 years ago

  • Assigned To set to Abram Connelly

#3 Updated by Sarah Guthrie over 4 years ago

  • Target version changed from 2015-02-13 sprint to 2015-03-06 sprint

#4 Updated by Ward Vandewege over 4 years ago

  • Description updated (diff)

#5 Updated by Nancy Ouyang over 4 years ago

  • Target version changed from 2015-03-06 sprint to 2015-02-13 sprint

#6 Updated by Sarah Guthrie over 4 years ago

  • Target version changed from 2015-02-13 sprint to 2015-03-06 sprint

#7 Updated by Bryan Cosca over 4 years ago

  • Target version changed from 2015-03-06 sprint to 2015-03-27 sprint

#8 Updated by Sarah Guthrie over 4 years ago

  • Subject changed from Lightning deployment plan to Lightning deployment plan / Uploading data specifications

#9 Updated by Bryan Cosca over 4 years ago

  • Target version changed from 2015-03-27 sprint to 2015-04-17 sprint

#10 Updated by Bryan Cosca over 4 years ago

  • Story points changed from 2.0 to 1.0

#11 Updated by Bryan Cosca over 4 years ago

  • Story points changed from 1.0 to 2.0

#12 Updated by Bryan Cosca over 4 years ago

  • Target version changed from 2015-04-17 sprint to 2015-05-08 sprint

#13 Updated by Bryan Cosca over 4 years ago

  • Target version deleted (2015-05-08 sprint)

#14 Updated by Sarah Guthrie over 4 years ago

  • Target version set to 2015-05-29 sprint

#15 Updated by Abram Connelly over 4 years ago

  • Target version deleted (2015-05-29 sprint)

#16 Updated by Nancy Ouyang about 4 years ago

  • Target version set to 2015-07-10 sprint

#17 Updated by Sarah Guthrie about 4 years ago

  • Target version changed from 2015-07-10 sprint to 2015-07-31 sprint

#18 Updated by Sarah Guthrie about 4 years ago

  • Target version changed from 2015-07-31 sprint to 2015-08-21 sprint

#19 Updated by Sarah Guthrie about 4 years ago

  • Target version changed from 2015-08-21 sprint to 2015-09-11 sprint

#20 Updated by Sarah Guthrie about 4 years ago

  • Target version changed from 2015-09-11 sprint to 2015-10-02 sprint

#21 Updated by Sarah Guthrie almost 4 years ago

  • Target version changed from 2015-10-02 sprint to 111

#22 Updated by Sarah Guthrie almost 4 years ago

  • Assigned To changed from Abram Connelly to Sarah Guthrie

#23 Updated by Sarah Guthrie almost 4 years ago

  • Story points changed from 2.0 to 0.5

#24 Updated by Sarah Guthrie almost 4 years ago

  • Project changed from Curoverse Science to Lightning
  • Target version changed from 111 to 2015-10-23 Lightning sprint

#25 Updated by Sarah Guthrie almost 4 years ago

  • Target version changed from 2015-10-23 Lightning sprint to 2015-11-13 Lightning sprint

#26 Updated by Sarah Guthrie almost 4 years ago

  • Target version changed from 2015-11-13 Lightning sprint to Future sprints (Lightning)

#27 Updated by Sarah Zaranek over 1 year ago

  • Status changed from New to Closed

Closing this out.

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