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Feature #524

closed

Report metadata

Added by Madeleine Ball about 13 years ago. Updated over 12 years ago.

Status:
Resolved
Priority:
High
Assigned To:
Target version:
-
Story points:
-

Description

We want to have a report giving some metadata about a genome file - percent called, percent of coding regions called, number of nonsynonymous SNPs, etc.

If we're going to include some numbers in our paper for these things, they should be generated automatically by our processing system.


Related issues

Related to GET-Evidence - Feature #528: collect metadata on the fly by passing a mutable object to generatorsResolvedMadeleine Ball02/17/2011Actions
Actions #1

Updated by Madeleine Ball about 13 years ago

  • Status changed from New to In Progress

I'm planning to store metadata as a dict in the ProgressTracker object from progresstracker.py.

Actions #2

Updated by Madeleine Ball about 13 years ago

  • Assigned To set to Madeleine Ball
Actions #3

Updated by Madeleine Ball almost 13 years ago

  • Status changed from In Progress to Resolved
  • Resolution set to fixed

Added metadata storage to the progresstracker object in commit 0d88c715

Marking this as resolved.

Actions #4

Updated by Madeleine Ball almost 13 years ago

  • Status changed from Resolved to In Progress

Marked the wrong issue as fixed, sorry, marking this as "in progress". The previous update should have been for issue #528 (which is related). Still need to make a metadata report.

Actions #5

Updated by Anonymous over 12 years ago

There is a metadata report now, forgot to close this.

Actions #6

Updated by Madeleine Ball over 12 years ago

  • Status changed from In Progress to Resolved

and maybe redmine should warn someone if they're about to submit an update anonymously... :)

Marking as resolved.

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