Idea #5334
open
[API] Implement GET /callsets/{callset-name}/gvcf API call
Description
Purpose is to return list of gVCF-formatted variations from reference for a callset.
See lightning/docs for specifications
Updated by Sarah Guthrie over 9 years ago
- Subject changed from Add API Call to Lightning: GET vcf-like-variants to [API] [Sprite] Implement POST /callsets/{callset-name}/gvcf and POST /callsets/{callset-name}/vcf API calls
- Description updated (diff)
Updated by Sarah Guthrie over 9 years ago
- Description updated (diff)
Specifications - details:
POST /callsets/{callset-name}/gvcf
Requires a request containing information about the loci to return. Returns a list of gVCF lines for the callset at these loci.
Request body:
{
'loci' : [ <Locus>, <Locus>, ... ] OR { <string> : <Locus>, <string> : <Locus>, ... }
}
Response body:
{
(<string>, <Locus>) OR <Locus> : [
<gVCF-line>,
<gVCF-line>,
...],
(<string>, <Locus>) OR <Locus> : [<gVCF-line>,
<gVCF-line>,
...],
...}
POST /callsets/{callset-name}/vcf
Requires a request containing information about the loci to return. Returns a list of VCF lines for the callset at these loci.
Request body:
{
'loci' : [ <Locus>, <Locus>, ... ] OR { <string> : <Locus>, <string> : <Locus>, ... },
}
Response body:
{
(<string>, <Locus>) OR <Locus> : [
<VCF-line>,
<VCF-line>,
...],
(<string>, <Locus>) OR <Locus> : [<VCF-line>,
<VCF-line>,
...],
...}
Updated by Sarah Guthrie about 9 years ago
- Subject changed from [API] [Sprite] Implement POST /callsets/{callset-name}/gvcf and POST /callsets/{callset-name}/vcf API calls to [API] Implement GET /callsets/{callset-name}/gvcf
- Description updated (diff)
Updated by Sarah Guthrie about 9 years ago
- Project changed from 39 to Lightning
- Subject changed from [API] Implement GET /callsets/{callset-name}/gvcf to [API] Implement GET /callsets/{callset-name}/gvcf API call
Updated by Sarah Guthrie about 9 years ago
- Target version set to Future sprints (Lightning)
Updated by Jiayong Li over 5 years ago
- Target version changed from Future sprints (Lightning) to Tiling Future