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Idea #6228
closed
gVCF to FASTJ converter
Added by Abram Connelly almost 9 years ago. Updated over 7 years ago.
Start date:
Due date:
Story points:
3.0
Updated by Abram Connelly almost 9 years ago
Current idea is to write a simple python program using htslib to convert GVCF to GFF and use the GFF as input to the standard pipeline.
Updated by Abram Connelly almost 9 years ago
- Target version changed from 2015-06-23 sprint to 2015-07-10 sprint
Updated by Sarah Guthrie almost 9 years ago
- Target version changed from 2015-07-10 sprint to 2015-07-31 sprint
Updated by Abram Connelly almost 9 years ago
- Target version deleted (
2015-07-31 sprint)
Updated by Sarah Guthrie almost 9 years ago
- Target version set to 2015-08-21 sprint
Updated by Abram Connelly over 8 years ago
- Target version changed from 2015-08-21 sprint to 2015-09-11 sprint
Updated by Sarah Guthrie over 8 years ago
- Target version changed from 2015-09-11 sprint to 2015-10-02 sprint
Updated by Sarah Guthrie over 8 years ago
- Target version changed from 2015-10-02 sprint to 111
Updated by Sarah Guthrie over 8 years ago
- Project changed from 39 to Lightning
- Subject changed from GVCF to FastJ converter to gVCF to FASTJ converter
- Target version changed from 111 to 2015-10-23 Lightning sprint
Updated by Abram Connelly over 8 years ago
- Target version changed from 2015-10-23 Lightning sprint to 2015-11-13 Lightning sprint
Updated by Sarah Guthrie over 8 years ago
- Target version changed from 2015-11-13 Lightning sprint to 2015-12-04 Lightning sprint
Updated by Abram Connelly over 7 years ago
- Status changed from New to Closed
This has been completed. The pasta repo provides basic tools for this and the tile server implements tile to gVCF conversion.
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