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Task #7571

open

Pipeline runner hangs after finishing the last job in webshell

Added by Bryan Cosca about 9 years ago. Updated 10 months ago.

Status:
New
Priority:
Normal
Assigned To:
-
Target version:
Future

Description

For example,

arv-run grep -H -n ATTGGAGGAAAGATGAGTGAC HWI-ST1027_129_D0THKACXX.1_1.fastq

It happened also for $ arv pipeline run --run-pipeline-here --template qr1hi-p5p6p-itzkwxblfermlwv bwa-mem::reference_collection=2463fa9efeb75e099685528b3b9071e0+438 bwa-mem::sample=3229739b505d2b878b62aed09895a55a+142 but I did not save that.

Files

arpihangs1.png (101 KB) arpihangs1.png Bryan Cosca, 10/15/2015 03:37 PM

Related issues 1 (0 open — 1 closed)

Related to Arvados - Bug #7015: [Documentation] Refresh user guideResolvedBryan Cosca10/14/2015Actions
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 #1

Updated by Bryan Cosca about 9 years ago

  • Description updated (diff)
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 #2

Updated by Brett Smith about 9 years ago

  • Subject changed from after running pipelines on the command line in webshell, the service hangs to Pipeline runner hangs after finishing the last job in webshell
  • Description updated (diff)
  • Parent task deleted (#7015)
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 #3

Updated by Brett Smith about 9 years ago

  • Target version deleted (Arvados Future Sprints)
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 #4

Updated by Peter Amstutz almost 2 years ago

  • Release set to 60
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 #5

Updated by Peter Amstutz 10 months ago

  • Target version set to Future
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