Idea #9044
open
[Crunch2] [Workbench] Browse and show tools using the GA4GH tool registry API
Added by Brett Smith over 8 years ago.
Updated 8 months ago.
Release relationship:
Auto
Description
This first version will just allow users to browse/select public workflows that have been registered at dockstore.org.
The API endpoint should be configurable, though, so that when Arvados supports the tool registry API itself (#9042) users will be able to select tools that are registered in Arvados.
- Description updated (diff)
- Category set to Workbench
- Description updated (diff)
- Target version set to 2016-07-20 sprint
- Target version deleted (
2016-07-20 sprint)
- Assigned To set to Radhika Chippada
- Subject changed from [Crunch2] [Workbench] Browse and show tools using the tool registry API to [Crunch2] [Workbench] Browse and show tools using the GA4GH tool registry API
- Target version set to Arvados Future Sprints
Implementation:
- Add a “Run a tool” button in the panel header next to “Run a pipeline” in dashboard.
- Add a config parameter to workbench to configure the tool registry end-point
- When this button is pressed, present a “Choose a tool to run” modal similar to “Choose a pipeline to run” to the user
Out of scope for this story:
- Support for json mount kind
- Presenting appropriate input selection options based on the selected tool description
- Running the selected tool
- Target version deleted (
Arvados Future Sprints)
- Target version set to Future
- Assigned To deleted (
Radhika Chippada)
- Category changed from Workbench to Workbench2
- Release set to 60
- Target version deleted (
Future)
- Target version set to Future
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