Story #9884

[Crunch2] Load test Crunch2 with large CWL workflow

Added by Tom Morris about 5 years ago. Updated almost 5 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
-
Target version:
Start date:
09/23/2016
Due date:
% Done:

100%

Estimated time:
(Total: 0.00 h)
Story points:
0.5
Release:
Release relationship:
Auto

Description

We only need tb05z or 9tee4 for this.


Subtasks

Task #10074: Run bcbio-nextgen workflow from BOSC talkResolvedPeter Amstutz

History

#1 Updated by Tom Morris about 5 years ago

  • Story points set to 0.5

#2 Updated by Ward Vandewege about 5 years ago

  • Description updated (diff)

#3 Updated by Tom Morris about 5 years ago

  • Target version set to Arvados Future Sprints

#4 Updated by Tom Morris about 5 years ago

  • Target version changed from Arvados Future Sprints to 2016-09-28 sprint

#5 Updated by Peter Amstutz about 5 years ago

  • Assigned To set to Peter Amstutz

#6 Updated by Peter Amstutz almost 5 years ago

Issues:

  • Shell node not working/reachable on 9tee4?
  • Requests library out of date, arvados-cwl-runner won't run on tb05z

#7 Updated by Peter Amstutz almost 5 years ago

  • Need to add "SbatchArguments": ["--workdir=/tmp"] to /etc/arvados/crunch-dispatch-slurm/config.json otherwise it tries to use the CWD of crunch-dispatch-slurm, which is /etc/sv/crunch-dispatch-slurm and doesn't exist on the shell nodes.

#8 Updated by Peter Amstutz almost 5 years ago

  • Status changed from New to Resolved

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