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# Project Tracker Status Priority Subject Assigned To Updated % Done Hours
6245 Arvados Task Closed Normal Improve race and exception handling in dns updates 04/12/2017 07:13 PM

6150 Arvados Task Closed Normal Test correct index usage with "explain analyze" Tom Clegg 06/11/2015 01:43 PM

6116 Arvados Task Closed Normal Review 5883-oauth2-update at get-evidence.git Abram Connelly 06/18/2015 03:07 PM

6106 Arvados Task Closed Normal Add a performance test case that exposes the slow query Tom Clegg 05/26/2015 07:21 PM

5855 Arvados Task Closed Normal Add Workbench support 03/13/2019 06:49 AM

5854 Arvados Task Closed Normal Add default display_order on server side Tom Clegg 03/13/2019 06:49 AM

5266 Arvados Task Closed Normal Detect various AJAX errors and ensure fail handler runs Tom Clegg 03/06/2015 02:50 AM

5265 Arvados Task Closed Normal Add tests for redirect, timeout, and error Tom Clegg 03/06/2015 02:50 AM

5031 Arvados Task Closed Normal Review/feedback Tom Clegg 03/15/2017 11:09 PM

4660 Arvados Task Closed Normal Generate quick file checksums, store progress in localStorage Tom Clegg 12/07/2014 11:14 PM

4656 Arvados Task Closed Normal Add collections.append API Tom Clegg 11/24/2014 04:27 PM

4617 Arvados Task Closed Normal Update doc Tom Clegg 01/08/2015 02:45 PM

3306 Arvados Task Closed Normal Replace preview pane with an "expand/collapse" button that shows details (e.g., collection contents) inline with the list of items Tom Clegg 08/06/2014 05:16 PM

2995 Arvados Task Closed Normal Stub crunch-job with something that spits many logs, in order to test the limiting feature Ward Vandewege 02/13/2019 06:00 PM

2565 Arvados Task Closed Normal Check out 2028 notes and sync up with Tom Brett Smith 07/04/2014 04:22 PM

2373 Arvados Task Closed Normal Figure out why, and fix. Start with paging branch. Tom Clegg 03/27/2014 09:12 PM

2299 Arvados Task Closed Normal Fill in _type automatically if not provided and corresponding _uuid is provided Peter Amstutz 03/26/2014 03:20 PM

2298 Arvados Task Closed Normal Reject mismatched _kind/_uuid pairs in before_create/update hooks in ArvadosModel Peter Amstutz 03/26/2014 03:20 PM

14284 Arvados Story Closed Normal Send real time container logs to a suitable log distribution system (instead of adding rows to the postgres logs table) 12/18/2019 08:55 PM

9867 Arvados Story Closed Normal [API] [Crunch] Permit UUIDs to be used in crunch1 job script_parameters 02/06/2020 07:12 PM

9539 Arvados Story Closed Normal [Keep] clarify/update -help message 01/29/2020 03:09 PM

9357 Arvados Story Closed Normal [Crunch2] Workbench shows logs of child containers when a crunch1 job submits child containers 01/03/2020 03:43 PM

9273 Arvados Story Closed Normal [Crunch2] Do not satisfy container requests that use non-content-address names for docker images, git commits, or collections 12/07/2016 12:10 AM

9031 Arvados Story Closed Normal [SDKs] arv-run-pipeline-instance accepts json objects/arrays as script parameter values 01/21/2020 06:20 PM

8964 Arvados Story Closed Normal [SDKs] Design more idiomatic and convenient Go SDK 01/18/2020 01:05 AM

5615 Arvados Story Closed Normal [Documentation] Pipeline/job Log tabs should link to (new) doc page(s) about how to read job logs and graphs. 01/15/2020 07:40 PM

5098 Arvados Story Closed Normal [Keep] Design: using Arvados to browse, and run jobs on, input data that is stored remotely (not on local Keep disks) Tom Clegg 02/13/2019 06:04 PM

4834 Arvados Story Closed Normal [Workbench] Show runtime stats graph for a completed job/pipeline 01/15/2020 07:03 PM

4831 Arvados Story Closed Normal [Admin] Browser-based "admin dashboard" client Tom Clegg 03/13/2019 03:13 PM

4607 Arvados Story Closed Normal [Crunch] Reusable task design doc Tom Clegg 01/08/2015 02:45 PM

4443 Arvados Story Closed Normal [DRAFT] [Workbench] Tour Guide Dax follows you around for a while, showing you something reasonable that you can do next. 03/10/2017 06:41 PM

4238 Arvados Story Closed Normal [Documentation] Show how to run a pipeline instance without using a template. 03/09/2017 09:51 PM

3937 Arvados Story Closed Normal [Workbench] Design collection trash behavior 02/06/2015 07:43 PM

3701 Arvados Story Closed Normal [Workbench] Show current user's compute node usage over time 03/10/2017 06:41 PM

3695 Arvados Story Closed Normal [Documentation] Replace direct job submission examples with single-component pipeline instances 01/03/2020 08:46 PM

3646 Arvados Story Closed Normal [Workbench] Toggle enable_job_reuse flag using pipeline instance show/edit/run page 01/03/2020 08:46 PM

3532 Arvados Story Closed Normal [Keep] Keepstore queries API server to verify tokens 02/13/2019 06:00 PM

3511 Arvados Story Closed Normal [Documentation] Present an efficient pattern for developing a pipeline template with multiple crunch scripts 03/10/2017 06:40 PM

3446 Arvados Story Closed Normal [Workbench] Sort by name before uuid in search results. Tom Clegg 03/10/2017 06:40 PM

3378 Arvados Story Closed Normal [Documentation] Howto: Download a few hundred files from a public web server and run a simple program on them. 01/03/2020 04:30 PM

3355 Arvados Story Closed Normal [SDK] Show the API server URI for the new pipeline instance when running a pipeline from the command line. 06/29/2020 06:31 PM

3348 Arvados Story Closed Normal [Workbench] Select two jobs, compare outputs and source code side by side 01/03/2020 04:30 PM

3347 Arvados Story Closed Normal [Crunch] Run dev (and real) jobs using a syntax as close as possible to "python foo.py input.txt" 03/09/2017 09:40 PM

3308 Arvados Story Closed Normal [Documentation] Present an efficient pattern for developing a C program using Crunch 01/03/2020 04:29 PM

3299 Arvados Story Closed Normal [Workbench] Render textile markup in description fields 05/16/2017 06:32 PM

3297 Arvados Story Closed Normal [Documentation] Design document for API server 01/03/2020 04:29 PM

3279 Arvados Story Closed Normal [Workbench] Link to OFTC web chat on version/bugreport modal 06/29/2020 06:32 PM

3255 Arvados Story Closed Normal [Documentation] Websocket example: trigger a pipeline whenever a new dataset is added to a project 01/03/2020 04:28 PM

3233 Arvados Story Closed Normal [Documentation] First page of doc.arvados.org links to tutorial page on wiki. 01/03/2020 04:28 PM

3216 Arvados Story Closed Normal [Workbench] User profile page with editable description for displaying to other users. Notification item reminds new users to provide a description. 01/03/2020 04:27 PM

3188 Arvados Story Closed Normal [Workbench] Merge "show job" functionality into "show pipeline instance" page 08/27/2014 04:19 PM

3179 Arvados Story Closed Normal "Dump core" option when running a job (or every job in a pipeline): save the state of a failed task's container before tearing it down. 06/29/2020 06:25 PM

3090 Arvados Story Closed Normal [Crunch] Pipeline template has a "parameters" section whose values can be referenced by script_parameters and runtime_constraints of individual components Tom Clegg 02/14/2017 08:00 PM

3045 Arvados Story Closed Normal [Workbench] Generalize "re-run this job" button 03/09/2017 09:35 PM

3044 Arvados Story Closed Normal [Documentation] Improve documentation for authoring crunch scripts 12/13/2016 07:49 PM

3022 Arvados Story Closed Normal Improvements to sortable log viewer 03/11/2022 09:45 PM

3020 Arvados Story Closed Normal [Deployment] Docker installation runs crunch-dispatch and worker nodes 01/22/2015 10:48 PM

3018 Arvados Story Closed Normal Collection names replace "resources" links and persistent/cache flags 12/02/2014 03:03 PM

3017 Arvados Story Closed Normal [Workbench] When comparing pipeline instances, show/highlight the differing values of script_parameters, instead of just highlighting the whole list of parameter keys 03/09/2017 09:35 PM

2056 Arvados Story Closed Normal Workbench displays a summary of activity on all objects belonging to me / all objects in a specific folder. 01/03/2020 04:22 PM

2039 Arvados Story Closed Normal New user sees a list of completed pipeline instances on Workbench dashboard, and can inspect the pipelines and data.  (Permissions/presentation) Tom Clegg 01/03/2020 04:22 PM

1968 Arvados Story Closed Normal Monitor disk usage (per user and per site; split by transient/persistent; optionally weighted by #users who want persistent). Misha Zatsman 05/28/2014 08:50 PM

16457 Arvados Bug Rejected Normal [ws] websocket server should obey TLS.Insecure config when connecting to controller, but doesn't Lucas Di Pentima 06/17/2020 03:32 PM

10120 Arvados Bug Rejected Normal [Crunch] crunch-dispatch log throttling should not apply to its own stderr 02/18/2022 03:15 PM

8151 Arvados Bug Rejected Normal [crunchstat-summary] jobs with tasks_per_node>1 need node size recommendations adjusted 03/15/2019 04:53 AM

4841 Arvados Bug Rejected Normal [Workbench] When using "Run pipeline" button at the top of project A, the pipeline template chooser should start out showing project A, not "All projects". 09/11/2019 02:53 PM

4102 Arvados Bug Rejected Normal [Keep] Fix FUSE test suite so it does not need to be updated every time a new collection fixture is added to apiserver 10/08/2014 07:43 PM

3418 Arvados Bug Rejected Normal [Crunch] crunch-job ignores task sequence 03/09/2017 09:40 PM

3077 Arvados Bug Rejected Normal Add migration to convert remaining non-root collection owner_uuids to name links Tom Clegg 08/26/2014 11:28 AM

2814 Arvados Bug Rejected Normal Editables cannot be edited twice in a row without refreshing page. 05/22/2014 11:10 AM

2508 Arvados Bug Rejected Normal Sasha gets "fiddlesticks" error when logging in to qr1hi. Tom Clegg 04/13/2014 04:13 PM

13646 Arvados Feature Rejected Normal [API] Rails API server loads cluster configuration file 02/13/2019 04:12 PM

10267 Arvados Feature Rejected Normal Permission-monitoring service keeps a flattened permissions table up to date 02/15/2017 08:29 PM

7847 Arvados Feature Rejected Normal [SDKs] Update run-command to use arv-mount --mount-tmp instead of staging directory 07/07/2021 06:35 PM

5944 Arvados Feature Rejected Normal [Workbench] Syntax highlighting for repository-browsing 05/07/2015 07:21 PM

475 GET-Evidence Feature Rejected Normal add “user manager” (control membership in groups: admin, curator, lab member) Tom Clegg 03/02/2022 04:03 PM

435 GET-Evidence Support Rejected Normal Work with Carlos et al. to integrate BioNotate annotations into GET-Evidence Tom Clegg 03/02/2022 04:02 PM

6957 Arvados Story Rejected Normal [SSO] Move sso-provider into arvados tree 01/15/2020 09:16 PM

3150 Arvados Story Rejected Normal [API] Add "trash" behavior for all object types, instead of literal rdbms "delete" 03/09/2017 09:35 PM

2992 Arvados Story Rejected Normal [Workbench] Support "display_order" (integer) key for pipeline template components. Obey when rendering pipeline summary/details in Workbench. 03/13/2019 06:50 AM

2877 Arvados Story Rejected Normal Script looks for CGI data in a specified folder, scrapes header comments in the files, and adds/updates metadata objects accordingly (e.g., provenance links with properties). 05/16/2017 06:08 PM

2874 Arvados Story Rejected Normal Add/move/display collection name links in Workbench, rather than collection uuids Tim Pierce 06/06/2014 01:42 PM

2524 Arvados Story Rejected Normal [Sample clients] Third party can generate a "ready to ingest" event using an API token scoped to a specific project. 03/15/2017 11:12 PM

2523 Arvados Story Rejected Normal [Sample clients] Ingestor utility responds to "ready to ingest" events by copying the specified files from staging directory to Keep and storing the collection in the specified group. Peter Amstutz 03/07/2017 06:16 PM

2028 Arvados Story Rejected Normal [SDKs] Python SDK supports Django model/manager style usage Tom Morris 12/13/2016 07:47 PM

12893 Arvados Bug Duplicate Normal [Crunch2] Logs should be saved to disk when container is cancelled 01/10/2018 02:46 PM

11822 Arvados Bug Duplicate Normal [API] Add recursive and include_trash params missing from discovery doc 06/07/2017 06:52 PM

10568 Arvados Bug Duplicate Normal crunchstat-summary should look for child jobs in "components" field of job record 01/04/2017 10:29 PM

10521 Arvados Bug Duplicate Normal [SDKs] [CLI] "arv collection list" retrieves manifest_text even if not explicitly selected 11/11/2016 04:36 PM

8907 Arvados Bug Duplicate Normal [SSO] package should not depend on postgresql 04/07/2016 06:17 PM

6943 Arvados Bug Duplicate Normal [Git hosting] arvados-git-httpd should return 4xx, not 5xx, for authentication errors 08/11/2015 05:30 PM

4505 Arvados Feature Duplicate Normal [SDKs] "arv get {uuid}" outputs JSON representation of given object 11/09/2015 03:31 AM

14611 Arvados Story Duplicate Normal [Epic] Site-wide search for text, filenames, data 02/20/2019 08:31 PM

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