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# Project Tracker Status Priority Subject Assigned To Updated Hours
5873 GET-Evidence Feature New Normal GET-Evidence pipeline code should be public Abram Connelly 05/20/2015 10:06 PM Actions
5872 GET-Evidence Bug In Progress Normal 23andMe report pipeline is broken Abram Connelly 05/14/2015 09:57 PM Actions
5862 Arvados Task New Normal Fill in component params from pipeline params in a-r-p-i Tom Clegg 02/14/2017 08:00 PM Actions
5861 Arvados Task New Normal Allow editing pipeline parameters in workbench Tom Clegg 02/14/2017 08:00 PM Actions
5853 Arvados Task New Normal Document pipeline parameters API Tom Clegg 02/14/2017 08:00 PM Actions
5841 Arvados Bug New Normal [Workbench] Link to script sources on github when repository is a github url 03/01/2024 09:16 PM Actions
5788 Arvados Idea New Normal [SDKs] [refactor] Dry up KeepService get() and put() in arvados/keep.py 03/01/2024 09:16 PM Actions
5782 Arvados Feature New Normal [Workbench] Support entering boolean script_parameters when editing a pipeline instance 03/01/2024 09:16 PM Actions
5778 Arvados Feature New Normal [FUSE] Support efficient copy at command line 03/01/2024 09:16 PM Actions
5768 Arvados Feature New Normal [Node Manager] Add max_node_per_user config 05/05/2015 06:34 PM Actions
5767 Arvados Feature New Normal [API] Websockets subscribe API should accept a start timestamp, so clients don't have to miss any events logged between the given start time and websocket connection success. 03/01/2024 09:16 PM Actions
5738 Arvados Bug New Normal [API] Validate that selected columns are selectable, and return an error if not 03/01/2024 09:16 PM Actions
5713 Arvados Bug New Normal [FUSE] File access sometimes takes too long on su92l Tom Morris 03/01/2024 09:16 PM Actions
5683 Tapestry Bug New Normal Trait surveys incomplete listed on a lot of entries in the WGS data page. Sounds like a bug. 04/08/2015 04:37 PM Actions
5678 Arvados Task Feedback Normal Review 4685-crunch-cwl-support 01/18/2017 06:31 AM Actions
5676 Arvados Feature New Normal [SDK] arv-copy automatically creates new repository(ies) on the destination cluster 03/01/2024 09:16 PM Actions
5624 Arvados Idea New Normal [API] [Workbench] [Performance] Use object caching to improvement performance (such as memcache). 03/01/2024 09:16 PM Actions
5621 Arvados Idea New Normal [Documentation] Improve SDK documentation 03/01/2024 09:16 PM Actions
5614 Arvados Bug New Normal [Workbench] 504 error returned when trying to create a large new collection 03/01/2024 09:16 PM Actions
5582 Arvados Feature New Normal [API] [Workbench] Add read-only ("locked") flag to projects 03/01/2024 09:16 PM Actions
5572 Tapestry Bug New Normal 'data_type' field in profile JSON report does not correctly have type 03/25/2015 10:33 PM Actions
5571 Tapestry Feature New Normal Add huID to 'aaData' entries in 'public_genetic_data.json' request 03/25/2015 09:47 PM Actions
5560 Arvados Bug New Normal [DRAFT] [API] Good API for accessing the old_ and new_attributes in Logs table properties column Tom Clegg 03/01/2024 09:16 PM Actions
5523 Arvados Bug New Normal [Crunch] crunchstat should not report errors during normal timing races Tom Clegg 03/01/2024 09:16 PM Actions
5494 Arvados Feature New Normal [Documentation] Run an uncommitted script straight from a working directory using arv-run-pipeline-instance --run-here 03/01/2024 09:16 PM Actions
5459 Arvados Feature New Normal [Crunch] Job logs include node-level resource usage statistics (cpu, ram, swap, etc) 03/01/2024 09:16 PM Actions
5454 Arvados Task New Normal Prototype keep-to-s3 gateway Tom Clegg 02/13/2019 06:04 PM Actions
5451 Arvados Bug New Normal [Documentation] Fix Go SDK comments so they look reasonable in godoc 03/01/2024 09:16 PM Actions
5439 Arvados Feature New Normal [Tests] Provide a docker image, based on puppet/packer process, that can run the entire test suite quickly. 03/01/2024 09:16 PM Actions
5428 Arvados Idea New Normal [Tests] Enhance keep testing to support signed locators. 03/01/2024 09:16 PM Actions
5391 Arvados Feature New Normal [SDK] Go KeepClient offers a "read block" API that recovers from transmission errors by attempting alternate servers. 03/01/2024 09:16 PM Actions
5382 Arvados Feature New Normal [Documentation] arvados VM simulator, demonstrating how it looks to use Arvados from CLI 03/01/2024 09:16 PM Actions
5380 Tapestry Feature New Normal Public profiles: add JSON for Enrollment History 03/04/2015 08:08 PM Actions
5379 Tapestry Feature New Normal Public profiles: add JSON for Absolute Pitch Survey 03/04/2015 08:07 PM Actions
5378 Tapestry Feature New Normal Public profiles: add JSON for Samples 03/04/2015 08:08 PM Actions
5377 Tapestry Feature New Normal Public profiles: add JSON for PHR data 03/04/2015 08:07 PM Actions
5371 Lightning Idea New Normal Specify GA4GH API Implementation with Lightning 05/15/2019 06:18 PM Actions
5335 Lightning Idea New Normal [API] [Documentation] Specify how to find the variants in a gene 05/15/2019 06:21 PM Actions
5334 Lightning Idea New Normal [API] Implement GET /callsets/{callset-name}/gvcf API call 05/15/2019 06:22 PM Actions
5332 Lightning Idea New Normal [Documentation] [Sprite] [API] Specify API Calls and Database for phenotypes in Sprite 05/15/2019 06:22 PM Actions
5331 Lightning Idea New Normal [API] Implement filtering on API calls 05/15/2019 06:23 PM Actions
5330 Lightning Idea New Normal [Documentation] Specify batch API-like queries 05/15/2019 06:24 PM Actions
5329 Lightning Idea New Normal [API] Implement GET /callsets/{callset-name}/tile-variants 05/15/2019 06:24 PM Actions
5327 Arvados Bug New Normal [SDK] CLI tools should catch socket errors like "Connection refused" 03/01/2024 09:16 PM Actions
5284 Arvados Feature New Normal [Docker] Auto setup as much as possible for new users 03/01/2024 09:16 PM Actions
5259 Arvados Feature New Normal [Tests] Reduce dependency on integration tests 03/01/2024 09:16 PM Actions
5245 Arvados Feature New Normal [Documentation] Show footer with date last updated 03/01/2024 09:16 PM Actions
5229 Tapestry Task New Normal Review 4766 Ward Vandewege 02/19/2015 08:35 PM Actions
5201 Arvados Feature New Normal [SDKs] arv-put --description X --properties P should set respective attrs on new collection. 03/01/2024 09:16 PM Actions
5193 Arvados Feature New Normal [Workbench] Public project page should encourage visitors to try using Arvados themselves 03/01/2024 09:16 PM Actions
5147 Arvados Bug New Normal [Docker] Make API server root URL in discovery document easier to resolve 03/01/2024 09:16 PM Actions
5139 Arvados Feature New Normal [SDKs] arv-get should support getting multiple files by shell glob 03/01/2024 09:16 PM Actions
5138 Arvados Feature New Normal [SDKs] arv-run-pipeline-instance should accept project and title parameters 03/01/2024 09:16 PM Actions
5134 Arvados Bug New Normal [SDKs] CLI tools fail or warn when current working directory is gone 03/01/2024 09:16 PM Actions
5127 Arvados Bug New Normal [Docs] Note apt key information in Python package READMEs 03/01/2024 09:16 PM Actions
5097 Arvados Feature New Normal [SDKs] CLI tools support project paths in addition to uuids 03/01/2024 09:16 PM Actions
5045 Arvados Bug New Normal [Workbench] reports "oops, request failed" rendering projects with very large collections 01/22/2015 08:08 PM Actions
5025 Arvados Bug New Normal [Docker] Make it easy to add data from the host system to containers 03/01/2024 09:16 PM Actions
5021 Arvados Bug New Normal [Workbench] Page for downloading collections with anonymous sharing link does not have any styling. 03/01/2024 10:11 PM Actions
5001 Lightning Idea New Normal Create a API interface to the public tile library including a "beacon" Abram Connelly 05/28/2019 05:34 PM Actions
4995 Lightning Idea New Normal Package lightning specifically for users 05/28/2019 05:30 PM Actions
4991 Arvados Bug New Normal [API] Make user.send_profile_created_notification detect preference changes better 01/28/2015 06:59 PM Actions
4979 Tapestry Feature New Normal Improve sample tracking to allow for bulk marking of samples 01/15/2015 02:02 AM Actions
4957 Arvados Bug New Normal [SDKs] arv keep put blows up when trying to put a danging symlink 03/01/2024 09:16 PM Actions
4919 Arvados Idea New Normal [API] Arvados clients can use standard OAuth2 protocol instead of custom token handling mechanism 03/01/2024 09:16 PM Actions
4906 Arvados Feature New Normal [Documentation/FUSE] Document '.arvados#collection' in shell VM keep mount 03/01/2024 09:16 PM Actions
4874 Arvados Task New Normal Test that comparisons display correctly 03/01/2024 09:16 PM Actions
4827 Lightning Idea New Normal Automatic Deployment Implementation Abram Connelly 05/28/2019 05:31 PM Actions
4809 Arvados Bug New Normal [Workbench] Code pops up for a second using web uploader 01/06/2015 04:06 PM Actions
4771 Arvados Bug New Normal [Workbench] Collection content hash should stay up-to-date (e.g., while uploading files) 03/01/2024 09:16 PM Actions
4767 Arvados Bug New Normal [API] Discovery doc should fix its incorrect "list" method description to be identical to "index" 03/01/2024 09:16 PM Actions
4730 Arvados Bug New Normal [SDKs] Remove ruby dependency from arv wrapper 07/10/2023 02:22 PM Actions
4706 Arvados Bug New Normal [Workbench] Re-connect to websockets when the connection drops; use "last_log_id" so nothing is missed. 03/01/2024 09:16 PM Actions
4669 Arvados Bug New Normal [SDKs] arv-put should assume --no-resume when --raw is given 03/01/2024 09:16 PM Actions
4650 Arvados Feature New Normal [API] API method and CLI shortcut for refreshing the signatures on some block locators (without creating a collection) 03/01/2024 09:16 PM Actions
4647 Arvados Feature New Normal [Workbench] Projects dropdown should have a free text filter box 03/01/2024 09:16 PM Actions
4611 Arvados Task New Normal Update doc to match current plans Tom Clegg 03/09/2017 09:54 PM Actions
4579 Arvados Feature New Normal [Documentation] Run-command docs should remind user how & why to exit non-zero on failure. 03/01/2024 09:16 PM Actions
4566 Arvados Idea New Normal [Documentation] Introduce compute workflow / pipeline concepts in user guide 03/01/2024 09:16 PM Actions
4531 Arvados Feature New Normal [Documentation] Set of introductory tutorials each focused on accomplishing a simple task 03/01/2024 09:16 PM Actions
4530 Arvados Feature New Normal [Workbench] Show more (earlier) log entries for a running job 03/01/2024 09:16 PM Actions
4508 Arvados Feature New Normal [Documentation] Best practices for getting the most out of job re-use 03/01/2024 09:16 PM Actions
4502 Arvados Feature New Normal [SDKs] "arv recent [objectType]" lists recently modified objects 03/01/2024 09:16 PM Actions
4452 Arvados Bug New Normal [Workbench] Report a Problem" menu item does not like being opened in a new tab/window. 03/01/2024 09:16 PM Actions
4431 Arvados Bug New Normal [SDKs] arv-copy should not require --dst-git-repo when copying on the same cluster 03/01/2024 09:16 PM Actions
4404 Arvados Feature New Normal [API] [SDKs] Include provenance information for uploaded Collections 03/01/2024 09:16 PM Actions
4358 Arvados Bug New Normal [Tests] When comparing pipelines, the graph should highlight the differences by using different colors for pipeline A/B/both. 03/01/2024 09:16 PM Actions
4350 Arvados Idea New Normal [Workbench] Order by Collections "Name" column puts "folders" (collections containing files) at the top 03/01/2024 09:16 PM Actions
4349 Arvados Feature New Normal [SDKs] When editing a template in arv-edit and faced with a parse error, when trying again, it should automatically take you to the line/column of the error 03/01/2024 09:16 PM Actions
4343 Arvados Feature New Normal [SDKs] arv create needs --project-uuid and --name parameters for appropriate classes 03/01/2024 09:16 PM Actions
4321 Arvados Task New Normal [SDK] PySDK should arrange exit(111) when a temporary failure exception is uncaught 03/09/2017 09:43 PM Actions
4309 Arvados Bug New Normal [SDK] arv-copy collection copy performance 03/01/2024 09:16 PM Actions
4302 Arvados Feature New Normal [Crunch] Pipelines should not fail immediately after one job failure, but continue running as much as possible 03/01/2024 09:16 PM Actions
4288 Arvados Bug New Normal [API] api server docker_images endpoint 03/01/2024 09:16 PM Actions
4255 Arvados Idea New Normal [SDKs] Implement "arv keep less" and "arv keep check" natively instead of hoping whless and whcheck are installed. 03/01/2024 09:16 PM Actions
4237 Arvados Idea New Normal [Documentation] Update and expand user/tutorials/tutorial-keep-mount.html to show practical ways of finding data via FUSE mount. 03/01/2024 09:16 PM Actions
4193 Arvados Feature New Normal [SDK] Make arv keep docker smarter about storing docker layers, thus making uploads of changed images (much) faster 03/01/2024 09:16 PM Actions
4191 Arvados Bug New Normal [Keep] "Shared" directory in arv-mount doesn't show non-project groups that own projects 03/01/2024 09:16 PM Actions
4175 Arvados Bug New Normal [API] API method and interface to check if a bugfix is deployed on a cluster 03/01/2024 09:16 PM Actions
3964 Arvados Feature New Normal [SDKs] Command-line diagnostic suite reveals problems on a shell VM (e.g., arv-mount, SDK version skew) 03/01/2024 09:16 PM Actions
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