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# Project Tracker Status Priority Subject Assigned To Updated % Done Hours
426 GET-Evidence Feature In Progress Normal Use compute cloud for back-end processing Tom Clegg 04/08/2011 03:06 AM

435 GET-Evidence Support In Progress High Work with Carlos et al. to integrate BioNotate annotations into GET-Evidence Tom Clegg 07/28/2011 12:35 PM

451 longupload Bug New Normal handle xmlhttprequest timeouts gracefully Tom Clegg 01/13/2011 07:04 PM

466 GET-Evidence Bug New Normal xmlrpc server is careless with huge temp files 02/11/2011 05:42 PM

468 GET-Evidence Bug New High latest-flat incorrectly displays non single-base substitution variants 04/21/2011 07:10 PM

475 GET-Evidence Feature New High add “user manager” (control membership in groups: admin, curator, lab member) Tom Clegg 02/15/2011 03:17 PM

476 GET-Evidence Feature New Low allow “lab members” group to upload/view publication PDFs Tom Clegg 02/16/2011 02:22 PM

478 GET-Evidence Bug New Normal Keep "overall odds ratio" updated when editing individual sets of OR figures Tom Clegg 02/15/2011 03:17 PM

479 GET-Evidence Bug New Normal NSF-Lys702Asn shows wrong hapmap frequency Tom Clegg 02/16/2011 02:57 PM

481 GET-Evidence Feature New Normal Test Internet Explorer, possibly use Chrome Frame to make editing features work in IE Tom Clegg 02/16/2011 02:57 PM

482 GET-Evidence Feature New Normal add “affects self (hom or dominant)” checkbox (vs “affects offspring”) on result page Tom Clegg 02/16/2011 02:57 PM

483 GET-Evidence Feature New Normal Handle/prevent edit conflicts more effectively Tom Clegg 02/16/2011 02:56 PM

484 GET-Evidence Feature New Normal Figure out better solution to HNF1A-Ser574Gly (genomes) vs. HNF1A-Gly574Ser (omim) Tom Clegg 02/16/2011 02:56 PM

485 GET-Evidence Feature New Normal Don't let users add variant pages for genes that aren't in knownGene Tom Clegg 02/16/2011 02:32 PM

486 GET-Evidence Feature New Normal support publications without PMIDs (other namespaces? original contributions? OWW?) Tom Clegg 02/16/2011 02:56 PM

488 GET-Evidence Feature New Normal Allow non-nsSNP variants Tom Clegg 02/16/2011 02:56 PM

490 GET-Evidence Feature In Progress Normal Classify web-hits as relevant/not-relevant Tom Clegg 09/01/2011 07:16 PM

493 GET-Evidence Feature New Normal Variant and Gene Removal Tom Clegg 02/15/2011 03:17 PM

494 GET-Evidence Bug New Normal Warning about automatic logout Tom Clegg 02/16/2011 02:58 PM

495 GET-Evidence Bug New Normal Allele frequency missing for rs41281314 Tom Clegg 02/15/2011 03:17 PM

496 GET-Evidence Feature New Low Import and process raw reads for Jay Flatley genome Tom Clegg 02/16/2011 02:28 PM

497 GET-Evidence Feature New Low Import and process raw reads for YRI trio data Tom Clegg 02/16/2011 02:28 PM

498 GET-Evidence Feature New Normal Show nucleotide positions for all dbSNP-keyed variants Tom Clegg 02/16/2011 02:56 PM

499 GET-Evidence Feature New Normal Merge rsids and AA-variant pages Tom Clegg 02/16/2011 02:55 PM

500 GET-Evidence Bug New Normal Trait-o-matic GET-E importer "AttributeError: 'tuple' object has no attribute 'remove'" Tom Clegg 11/07/2012 10:46 AM

501 GET-Evidence Feature New Normal GWAS - mark existing "not reviewed" variants as "pathogenic" Tom Clegg 02/16/2011 02:55 PM

502 GET-Evidence Feature New Normal Update PGP2,3,5,7,8,10 on snp.med and evidence.PG Tom Clegg 02/16/2011 02:55 PM

503 GET-Evidence Bug New Normal Import aachanges starting with termination (eg. METTL8-X379R) Tom Clegg 02/15/2011 03:17 PM

504 GET-Evidence Bug New Low Import aachanges containing periods (eg. HGC6.3-N156S) Tom Clegg 02/15/2011 03:17 PM

506 GET-Evidence Bug New Normal Standardize gene names (correctly) Tom Clegg 02/16/2011 02:45 PM

507 GET-Evidence Feature New Normal Report of insufficiently evaluated variants meeting autoscore thresholds Tom Clegg 02/16/2011 02:54 PM

509 GET-Evidence Bug New Normal Clean up runt variants imported by PharmGKB Tom Clegg 02/16/2011 02:54 PM

514 GET-Evidence Bug New Normal ereg Deprecated in PHP 5.3.0 Tom Clegg 02/15/2011 03:17 PM

515 GET-Evidence Bug New Normal 'Undefined' notices Tom Clegg 02/15/2011 03:17 PM

516 GET-Evidence Feature New Normal Add conservation track from ucsc 02/17/2011 07:08 PM

517 GET-Evidence Feature New Normal Genome links should indicate which data set(s) actually support the variant call Tom Clegg 02/15/2011 03:17 PM

518 GET-Evidence Bug New Normal Handle "data set is no longer public" during import_genomes Tom Clegg 02/16/2011 02:54 PM

519 GET-Evidence Feature New Normal Use "BED" / "BED Detail" format instead of GFF Tom Clegg 02/16/2011 02:53 PM

529 GET-Evidence Feature New Normal Interpret phased (haplotype) data Evan Maxwell 07/07/2011 02:20 PM

533 GET-Evidence Bug New Normal PGP11 genome report has error messages 03/01/2011 03:01 PM

539 GET-Evidence Feature New Normal call synonymous amino acids that match pathogenic reference alleles (e.g. F5 R534R) 03/08/2011 06:53 PM

540 GET-Evidence Bug In Progress Normal Textile download link broken (404 Error) during install 03/10/2011 07:15 PM

556 GET-Evidence Bug New Normal Visualization improvements 04/21/2011 06:48 PM

578 GET-Evidence Feature Feedback Normal Improve reporting of variant/allele frequencies 05/23/2011 09:56 PM

601 GET-Evidence Feature New Normal Find consensus nonref alleles & call when matching ref 07/07/2011 12:25 PM

696 GET-Evidence Feature New Normal Add Google Search API 09/15/2011 01:53 PM

714 GET-Evidence Feature New Normal Add spam-control measures 09/22/2011 06:59 PM

775 GET-Evidence Bug New Normal https://evidence.personalgenomes.org/ should not show huPGP site 12/06/2013 08:38 PM

835 GET-Evidence Bug New Urgent Error when saving edits or submitting 02/06/2012 04:44 PM

925 GET-Evidence Feature In Progress Normal Add EVS frequency data Tom Clegg 05/16/2012 03:30 PM

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