Idea #4566
Updated by Tom Clegg almost 10 years ago
The first page about running your own compute jobs (beyond using an existing template in Workbench) dives right into the deep end with bwa-mem and some UUIDs. http://doc.arvados.org/user/topics/running-pipeline-command-line.html
Before this page we need to
* introduce the relevant concepts of pipeline templates, pipeline instances, components, and jobs
* offer a couple of different scenarios, with a summary of the appropriate way to build and invoke pipelines in each case (with links to the examples on the other tutorial pages).