Feature #8015
Updated by Tom Clegg about 8 years ago
Implement mount points in @crunch-run@ as described here: https://dev.arvados.org/projects/arvados/wiki/Containers_API#Mount-types Approach # Before starting the docker container, build an arv-mount command line and run arv-mount in a new temporary directory # Check out any git repositories that are specified to a new temporary directory # Add host bind mounts to the container creation mapping the arv-mount and git temp directories to the desired targets inside the container. # Run the docker container, wait for it to finish container # If When the docker container used one of its mount points as an output directory, record its output (i.e., get the manifest_text from the JSON object in the magic @.arvados#collection@ file, create a new collection, and record the resulting PDH) # Run completes, run "fusermount -u" to unmount the arv-mount directory # Delete any temporary directories git checkouts