Bug #8879
Updated by Sarah Guthrie about 8 years ago
I ran the following in su92l shell: <pre> arvados-cwl-runner --submit --ignore-docker-for-reuse --project-uuid=su92l-j7d0g-kxsmk1a0bgurbi9 --no-wait --enable-reuse main-bwa-platypus-NA12878.cwl main-bwa-platypus-NA12878-samples.json /home/sguthrie/venv/bin/arvados-cwl-runner 1.0.20160401183214, arvados-python-client 0.1.20160331153549, cwltool 1.0.20160331184641 2016-04-04 17:38:58 arvados.arv-run[21850] INFO: Upload local files: "wf-variantcall.cwl" "wf-alignment.cwl" "steps/combine_sample_regions.cwl" "steps/concat_batch_variantcalls.cwl" "steps/postprocess_alignment.cwl" "steps/prep_samples.cwl" "steps/get_parallel_regions.cwl" "steps/merge_split_alignments.cwl" "steps/batch_for_variantcall.cwl" "steps/variantcall_batch_region.cwl" "steps/process_alignment.cwl" "steps/prep_align_inputs.cwl" "steps/compare_to_rm.cwl" "steps/postprocess_variants.cwl" "main-bwa-platypus-NA12878.cwl" 2016-04-04 17:38:59 arvados.arv-run[21850] INFO: Uploaded to su92l-4zz18-6n4wlyrgqf6znvl 2016-04-04 17:39:04 arvados.cwl-runner[21850] INFO: Submitted job su92l-8i9sb-sjie1gntriubkj6 </pre> The local file collection was uploaded to the correct project, rpoblem, but the job was not submitted with the correct project owner