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Feature #13773

Updated by Peter Amstutz over 6 years ago

It is useful to know when a container is going to fail, but hasn't completed yet. 

 Workflow developers / users want to know this so workflows can be resubmitted. 

 arvados-cwl-runner wants to use this to avoid reusing an arvados-cwl-runner container which has already decided to fail. 

 Need to: 

 * Decide how it should be represented on the container record; see [[Container status / outcome reporting]] 
 * Add required field(s) to database and API models 
 * Make arvados-cwl-runner set "will fail" status on the container when a workflow step fails. 
 * API server should take "will fail" status into account when searching for containers to reuse (via "filters" in arvados-cwl-runner's container request) 
 * In Workbench, display "will fail" status differently from "running" 

 h2. Proposed design 

 Add a @status@ field to @containers@ model on API server, as an indexed jsonb field.    This field can be updated in all non-final states (Queued/Locked/Running). 

 Document well known subproperties under @status@: 

 * @error@: list of strings, indicates the container will definitely fail, or has already failed 
 * @warning@: list of strings, indicates something unusual happened or is currently happening, but isn't considered fatal 
 * @activity@: string, a message for the end user about what state the container is currently in 

 Update arvados-cwl-runner to put error messages (such as failed jobs, or errors in the CWL) into @error@ 

 arvados-cwl-runner should report jobsComplete / jobsWaiting / jobsFailed 

 If a container has an @error@ field in its @status@ then it must not be a candidate for reuse. 

 If a container has @error@ or @warning@ in its @status@, Workbench should display it differently. 

 Workbench should display @error@ or @warning@ in the work unit display. 

 h3. Additional ideas 

 Crunch-dispatch-slurm can update the @activity@ field to indicate "in slurm queue" 

 Crunch-run can update the @activity@ field to indicate @loading Docker image@ or @uploading output@ 

 Crunch-run or arv-mount can detect likely cache thrashing conditions and generate a warning

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