Bug #17738

Updated by Ward Vandewege 6 months ago

Both api server and workbench1 are refusing to start with the error:

<pre>
There was an error while trying to load the gem 'arvados'.
Gem Load Error is: can't modify frozen String
</pre>

Full backtrace for workbench1:
<pre>
There was an error while trying to load the gem 'arvados'.
Gem Load Error is: can't modify frozen String
Backtrace for gem load error is:
/var/www/arvados-workbench/current/vendor/cache/arvados-c210114aa8c7/sdk/ruby/lib/arvados/google_api_client.rb:9:in `strip!'
/var/www/arvados-workbench/current/vendor/cache/arvados-c210114aa8c7/sdk/ruby/lib/arvados/google_api_client.rb:9:in `<top (required)>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `block in require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/loaded_features_index.rb:92:in `register'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:22:in `require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:31:in `require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:291:in `block in require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:257:in `load_dependency'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:291:in `require'
/var/www/arvados-workbench/current/vendor/cache/arvados-c210114aa8c7/sdk/ruby/lib/arvados.rb:11:in `<top (required)>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `block in require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/loaded_features_index.rb:92:in `register'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:22:in `require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:31:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:81:in `block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `block in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler.rb:114:in `require'
/var/www/arvados-workbench/current/config/application.rb:22:in `<top (required)>'
/var/www/arvados-workbench/current/config/environment.rb:6:in `require_relative'
/var/www/arvados-workbench/current/config/environment.rb:6:in `<top (required)>'
config.ru:7:in `require'
config.ru:7:in `block in <main>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `instance_eval'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `initialize'
config.ru:1:in `new'
config.ru:1:in `<main>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `eval'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `preload_app'
/usr/share/passenger/helper-scripts/rack-preloader.rb:189:in `block in <module:App>'
/usr/lib/ruby/vendor_ruby/phusion_passenger/loader_shared_helpers.rb:390:in `run_block_and_record_step_progress'
/usr/share/passenger/helper-scripts/rack-preloader.rb:188:in `<module:App>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:30:in `<module:PhusionPassenger>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:29:in `<main>'
Bundler Error Backtrace:
(Bundler::GemRequireError)
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:84:in `rescue in block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:80:in `block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `block in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler.rb:114:in `require'
/var/www/arvados-workbench/current/config/application.rb:22:in `<top (required)>'
/var/www/arvados-workbench/current/config/environment.rb:6:in `require_relative'
/var/www/arvados-workbench/current/config/environment.rb:6:in `<top (required)>'
config.ru:7:in `require'
config.ru:7:in `block in <main>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `instance_eval'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `initialize'
config.ru:1:in `new'
config.ru:1:in `<main>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `eval'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `preload_app'
/usr/share/passenger/helper-scripts/rack-preloader.rb:189:in `block in <module:App>'
/usr/lib/ruby/vendor_ruby/phusion_passenger/loader_shared_helpers.rb:390:in `run_block_and_record_step_progress'
/usr/share/passenger/helper-scripts/rack-preloader.rb:188:in `<module:App>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:30:in `<module:PhusionPassenger>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:29:in `<main>'
The stdout/stderr output of the subprocess so far is:

Error: The application encountered the following error: There was an error while trying to load the gem 'arvados'.
Gem Load Error is: can't modify frozen String
Backtrace for gem load error is:
/var/www/arvados-workbench/current/vendor/cache/arvados-c210114aa8c7/sdk/ruby/lib/arvados/google_api_client.rb:9:in `strip!'
/var/www/arvados-workbench/current/vendor/cache/arvados-c210114aa8c7/sdk/ruby/lib/arvados/google_api_client.rb:9:in `<top (required)>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `block in require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/loaded_features_index.rb:92:in `register'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:22:in `require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:31:in `require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:291:in `block in require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:257:in `load_dependency'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:291:in `require'
/var/www/arvados-workbench/current/vendor/cache/arvados-c210114aa8c7/sdk/ruby/lib/arvados.rb:11:in `<top (required)>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `require'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `block in require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/loaded_features_index.rb:92:in `register'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:22:in `require_with_bootsnap_lfi'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:31:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:81:in `block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `block in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler.rb:114:in `require'
/var/www/arvados-workbench/current/config/application.rb:22:in `<top (required)>'
/var/www/arvados-workbench/current/config/environment.rb:6:in `require_relative'
/var/www/arvados-workbench/current/config/environment.rb:6:in `<top (required)>'
config.ru:7:in `require'
config.ru:7:in `block in <main>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `instance_eval'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `initialize'
config.ru:1:in `new'
config.ru:1:in `<main>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `eval'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `preload_app'
/usr/share/passenger/helper-scripts/rack-preloader.rb:189:in `block in <module:App>'
/usr/lib/ruby/vendor_ruby/phusion_passenger/loader_shared_helpers.rb:390:in `run_block_and_record_step_progress'
/usr/share/passenger/helper-scripts/rack-preloader.rb:188:in `<module:App>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:30:in `<module:PhusionPassenger>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:29:in `<main>'
Bundler Error Backtrace:
(Bundler::GemRequireError)
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:84:in `rescue in block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:80:in `block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `block in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler.rb:114:in `require'
/var/www/arvados-workbench/current/config/application.rb:22:in `<top (required)>'
/var/www/arvados-workbench/current/config/environment.rb:6:in `require_relative'
/var/www/arvados-workbench/current/config/environment.rb:6:in `<top (required)>'
config.ru:7:in `require'
config.ru:7:in `block in <main>'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `instance_eval'
/var/www/arvados-workbench/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `initialize'
config.ru:1:in `new'
config.ru:1:in `<main>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `eval'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `preload_app'
/usr/share/passenger/helper-scripts/rack-preloader.rb:189:in `block in <module:App>'
/usr/lib/ruby/vendor_ruby/phusion_passenger/loader_shared_helpers.rb:390:in `run_block_and_record_step_progress'
/usr/share/passenger/helper-scripts/rack-preloader.rb:188:in `<module:App>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:30:in `<module:PhusionPassenger>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:29:in `<main>'
</pre>

Full backtrace for api:

<pre>
There was an error while trying to load the gem 'arvados'.
Gem Load Error is: can't modify frozen String
Backtrace for gem load error is:
/var/www/arvados-api/current/vendor/cache/arvados-81725af5d5d2/sdk/ruby/lib/arvados/google_api_client.rb:9:in `strip!'
/var/www/arvados-api/current/vendor/cache/arvados-81725af5d5d2/sdk/ruby/lib/arvados/google_api_client.rb:9:in `<top (required)>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `block in require_with_bootsnap_lfi'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/loaded_features_index.rb:92:in `register'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:22:in `require_with_bootsnap_lfi'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:31:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:291:in `block in require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:257:in `load_dependency'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/activesupport-5.2.4.5/lib/active_support/dependencies.rb:291:in `require'
/var/www/arvados-api/current/vendor/cache/arvados-81725af5d5d2/sdk/ruby/lib/arvados.rb:11:in `<top (required)>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `require'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:23:in `block in require_with_bootsnap_lfi'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/loaded_features_index.rb:92:in `register'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:22:in `require_with_bootsnap_lfi'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/bootsnap-1.4.7/lib/bootsnap/load_path_cache/core_ext/kernel_require.rb:31:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:81:in `block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `block in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler.rb:114:in `require'
/var/www/arvados-api/current/config/application.rb:38:in `block in <top (required)>'
/var/www/arvados-api/current/config/application.rb:28:in `suppress_warnings'
/var/www/arvados-api/current/config/application.rb:36:in `<top (required)>'
/var/www/arvados-api/current/config/environment.rb:6:in `require_relative'
/var/www/arvados-api/current/config/environment.rb:6:in `<top (required)>'
config.ru:7:in `require'
config.ru:7:in `block in <main>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `instance_eval'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `initialize'
config.ru:1:in `new'
config.ru:1:in `<main>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `eval'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `preload_app'
/usr/share/passenger/helper-scripts/rack-preloader.rb:189:in `block in <module:App>'
/usr/lib/ruby/vendor_ruby/phusion_passenger/loader_shared_helpers.rb:390:in `run_block_and_record_step_progress'
/usr/share/passenger/helper-scripts/rack-preloader.rb:188:in `<module:App>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:30:in `<module:PhusionPassenger>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:29:in `<main>'
Bundler Error Backtrace:
(Bundler::GemRequireError)
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:84:in `rescue in block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:80:in `block (2 levels) in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:76:in `block in require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `each'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler/runtime.rb:65:in `require'
/var/lib/gems/2.5.0/gems/bundler-1.17.3/lib/bundler.rb:114:in `require'
/var/www/arvados-api/current/config/application.rb:38:in `block in <top (required)>'
/var/www/arvados-api/current/config/application.rb:28:in `suppress_warnings'
/var/www/arvados-api/current/config/application.rb:36:in `<top (required)>'
/var/www/arvados-api/current/config/environment.rb:6:in `require_relative'
/var/www/arvados-api/current/config/environment.rb:6:in `<top (required)>'
config.ru:7:in `require'
config.ru:7:in `block in <main>'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `instance_eval'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.5.0/gems/rack-2.2.3/lib/rack/builder.rb:125:in `initialize'
config.ru:1:in `new'
config.ru:1:in `<main>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `eval'
/usr/share/passenger/helper-scripts/rack-preloader.rb:101:in `preload_app'
/usr/share/passenger/helper-scripts/rack-preloader.rb:189:in `block in <module:App>'
/usr/lib/ruby/vendor_ruby/phusion_passenger/loader_shared_helpers.rb:390:in `run_block_and_record_step_progress'
/usr/share/passenger/helper-scripts/rack-preloader.rb:188:in `<module:App>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:30:in `<module:PhusionPassenger>'
/usr/share/passenger/helper-scripts/rack-preloader.rb:29:in `<main>'
</pre>

I've also attached the passenger error file for workbench1 and api.

Versions:

<pre>
ii arvados-api-server 2.2.0~dev20210524183021-1
ii arvados-workbench 2.2.0~dev20210524183021-1
</pre>

Workbench ruby and gems:

<pre>
workbench.ce8i5:~# ruby --version
ruby 2.5.1p57 (2018-03-29 revision 63029) [x86_64-linux-gnu]
</pre>

<pre>
workbench.ce8i5:/var/www/arvados-workbench/current# bundle exec gem list

*** LOCAL GEMS ***

actioncable (5.2.4.5)
actionmailer (5.2.4.5)
actionpack (5.2.4.5)
actionview (5.2.4.5)
activejob (5.2.4.5)
activemodel (5.2.4.5)
activerecord (5.2.4.5)
activerecord-nulldb-adapter (0.3.9)
activestorage (5.2.4.5)
activesupport (5.2.4.5)
addressable (2.7.0)
andand (1.3.3)
angularjs-rails (1.3.15)
arel (9.0.0)
arvados (1.5.0.pre20200114202620)
arvados-google-api-client (0.8.7.4)
autoparse (0.3.3)
autoprefixer-rails (9.5.1.1)
bootsnap (1.4.7)
bootstrap-sass (3.4.1)
bootstrap-tab-history-rails (0.1.0)
bootstrap-x-editable-rails (1.5.1.1)
builder (3.2.4)
bundler (1.17.3)
byebug (11.0.1)
capistrano (2.15.9)
capybara (2.5.0)
childprocess (0.9.0)
cliver (0.3.2)
coffee-rails (4.2.2)
coffee-script (2.4.1)
coffee-script-source (1.12.2)
commonjs (0.2.7)
concurrent-ruby (1.1.8)
crass (1.0.6)
deep_merge (1.2.1)
docile (1.3.1)
erubi (1.10.0)
execjs (2.7.0)
extlib (0.9.16)
faraday (0.15.4)
ffi (1.10.0)
flamegraph (0.9.5)
globalid (0.4.2)
googleauth (0.9.0)
headless (1.0.2)
highline (2.0.2)
httpclient (2.8.3)
i18n (0.9.5)
jquery-rails (4.3.3)
json (2.3.0)
jwt (1.5.6)
launchy (2.4.3)
less (2.6.0)
less-rails (4.0.0)
libv8 (3.16.14.19 x86_64-linux)
lograge (0.10.0)
logstash-event (1.2.02)
loofah (2.9.0)
mail (2.7.1)
marcel (0.3.3)
memoist (0.16.2)
metaclass (0.0.4)
method_source (1.0.0)
mime-types (3.2.2)
mime-types-data (3.2019.0331)
mimemagic (0.3.8)
mini_mime (1.0.2)
mini_portile2 (2.5.1)
minitest (5.10.3)
mocha (1.8.0)
morrisjs-rails (0.5.1.2)
msgpack (1.3.3)
multi_json (1.15.0)
multipart-post (2.1.1)
net-scp (2.0.0)
net-sftp (2.1.2)
net-ssh (5.2.0)
net-ssh-gateway (2.0.0)
nio4r (2.5.7)
nokogiri (1.11.5 x86_64-linux)
npm-rails (0.2.1)
oj (3.7.12)
os (1.1.1)
passenger (6.0.2)
piwik_analytics (1.0.2)
poltergeist (1.5.1)
public_suffix (4.0.5)
racc (1.5.2)
rack (2.2.3)
rack-mini-profiler (1.0.2)
rack-test (1.1.0)
rails (5.2.4.5)
rails-controller-testing (1.0.4)
rails-dom-testing (2.0.3)
rails-html-sanitizer (1.3.0)
rails-perftest (0.0.7)
railties (5.2.4.5)
rake (13.0.3)
raphael-rails (2.1.2)
rb-fsevent (0.10.3)
rb-inotify (0.10.0)
RedCloth (4.3.2)
ref (2.0.0)
request_store (1.4.1)
responders (2.4.1)
retriable (1.4.1)
ruby-debug-passenger (0.2.0)
ruby-prof (0.17.0)
rubyzip (1.3.0)
rvm-capistrano (1.5.6)
safe_yaml (1.0.5)
sass (3.7.4)
sass-listen (4.0.0)
sassc (2.0.1)
sassc-rails (2.1.0)
selenium-webdriver (3.141.0)
signet (0.11.0)
simplecov (0.16.1)
simplecov-html (0.10.2)
simplecov-rcov (0.2.3)
sprockets (3.7.2)
sprockets-rails (3.2.2)
sshkey (2.0.0)
themes_for_rails (0.5.1)
therubyracer (0.12.3)
thor (1.1.0)
thread_safe (0.3.6)
tilt (2.0.9)
tzinfo (1.2.9)
uglifier (2.7.2)
websocket-driver (0.7.3)
websocket-extensions (0.1.5)
xpath (2.1.0)
</pre>

API ruby and gems:

<pre>
api.ce8i5:/tmp# ruby --version
ruby 2.5.1p57 (2018-03-29 revision 63029) [x86_64-linux-gnu]
</pre>

<pre>
api.ce8i5:/var/www/arvados-api/current# bundle exec gem list

*** LOCAL GEMS ***

actioncable (5.2.4.5)
actionmailer (5.2.4.5)
actionpack (5.2.4.5)
actionview (5.2.4.5)
activejob (5.2.4.5)
activemodel (5.2.4.5)
activerecord (5.2.4.5)
activestorage (5.2.4.5)
activesupport (5.2.4.5)
acts_as_api (1.0.1)
addressable (2.7.0)
andand (1.3.3)
arel (9.0.0)
arvados (1.5.0.pre20200114202620)
arvados-google-api-client (0.8.7.4)
autoparse (0.3.3)
bootsnap (1.4.7)
builder (3.2.4)
bundler (1.17.3)
byebug (11.0.1)
capistrano (2.15.9)
concurrent-ruby (1.1.8)
crass (1.0.6)
erubi (1.10.0)
execjs (2.7.0)
extlib (0.9.16)
factory_bot (5.0.2)
factory_bot_rails (5.0.1)
faraday (0.15.4)
ffi (1.9.25)
globalid (0.4.2)
googleauth (0.9.0)
hashie (3.6.0)
highline (2.0.1)
httpclient (2.8.3)
i18n (0.9.5)
jquery-rails (4.3.3)
json (2.3.0)
jwt (1.5.6)
launchy (2.4.3)
libv8 (3.16.14.19 x86_64-linux)
listen (3.2.1)
lograge (0.10.0)
logstash-event (1.2.02)
loofah (2.9.0)
mail (2.7.1)
marcel (0.3.3)
memoist (0.16.2)
metaclass (0.0.4)
method_source (1.0.0)
mimemagic (0.3.8)
mini_mime (1.0.2)
mini_portile2 (2.5.1)
minitest (5.10.3)
mocha (1.8.0)
msgpack (1.3.3)
multi_json (1.14.1)
multi_xml (0.6.0)
multipart-post (2.1.1)
net-scp (2.0.0)
net-sftp (2.1.2)
net-ssh (5.2.0)
net-ssh-gateway (2.0.0)
nio4r (2.5.7)
nokogiri (1.11.5 x86_64-linux)
oauth2 (1.4.1)
oj (3.9.2)
omniauth (1.4.3)
omniauth-oauth2 (1.5.0)
optimist (3.0.0)
os (1.0.1)
passenger (6.0.2)
pg (1.1.4)
power_assert (1.1.4)
public_suffix (4.0.3)
racc (1.5.2)
rack (2.2.3)
rack-test (1.1.0)
rails (5.2.4.5)
rails-controller-testing (1.0.4)
rails-dom-testing (2.0.3)
rails-html-sanitizer (1.3.0)
rails-observers (0.1.5)
rails-perftest (0.0.7)
railties (5.2.4.5)
rake (13.0.3)
rb-fsevent (0.10.3)
rb-inotify (0.9.10)
ref (2.0.0)
request_store (1.4.1)
responders (2.4.1)
retriable (1.4.1)
ruby-prof (0.15.9)
rvm-capistrano (1.5.6)
safe_yaml (1.0.5)
sass (3.5.5)
sass-listen (4.0.0)
sass-rails (5.0.7)
signet (0.11.0)
simplecov (0.7.1)
simplecov-html (0.7.1)
simplecov-rcov (0.2.3)
sprockets (3.7.2)
sprockets-rails (3.2.2)
sshkey (2.0.0)
test-unit (3.3.1)
themes_for_rails (0.5.1)
therubyracer (0.12.3)
thor (1.1.0)
thread_safe (0.3.6)
tilt (2.0.8)
tzinfo (1.2.9)
uglifier (2.7.2)
websocket-driver (0.7.3)
websocket-extensions (0.1.5)
</pre>

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