Bug #17765
Updated by Ward Vandewege almost 3 years ago
arv-put reads from standard input by default. But is seems to assume text-only require non-binary input that way. Perhaps another variation of the similar bugs we saw resulting from the switch to Python 3? <pre> $ cat some-binary-file |arv-put 2021-06-04 19:53:08 arvados.arv_put[18241] INFO: No cache usage requested for this run. Traceback (most recent call last): File "/usr/bin/arv-put", line 7, in <module> main() File "/usr/share/python3/dist/python3-arvados-python-client/lib/python3.7/site-packages/arvados/commands/put.py", line 1270, in main trash_at=trash_at) File "/usr/share/python3/dist/python3-arvados-python-client/lib/python3.7/site-packages/arvados/commands/put.py", line 508, in __init__ self._build_upload_list() File "/usr/share/python3/dist/python3-arvados-python-client/lib/python3.7/site-packages/arvados/commands/put.py", line 526, in _build_upload_list self._write_stdin(self.filename or 'stdin') File "/usr/share/python3/dist/python3-arvados-python-client/lib/python3.7/site-packages/arvados/commands/put.py", line 746, in _write_stdin self._write(sys.stdin, output) File "/usr/share/python3/dist/python3-arvados-python-client/lib/python3.7/site-packages/arvados/commands/put.py", line 839, in _write data = source_fd.read(arvados.config.KEEP_BLOCK_SIZE) File "/usr/share/python3/dist/python3-arvados-python-client/lib/python3.7/codecs.py", line 322, in decode (result, consumed) = self._buffer_decode(data, self.errors, final) UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte </pre>