Bug #18027
Updated by Ward Vandewege over 2 years ago
From https://dev.arvados.org/issues/17755#note-27
===================================================================================================
The 3rd failure is puzzling, if you check stderr it actually did run to the end, but failed the upload. This happened after the intervention of being stuck in queued state and killing the compute node.
> 2021-08-07T00:08:37.343893355Z Executing container 'tordo-dz642-xm3fbl5he5o2aul'
> ...
> 2021-08-07T00:08:39.823076366Z Waiting for container to finish
> 2021-08-07T00:10:47.551657400Z error in CaptureOutput: error scanning files to copy to output: lstat "/var/spool/cwl": lstat /tmp/crunch-run.tordo-dz642-xm3fbl5he5o2aul.609138299/tmp536330368: no such file or directory
> 2021-08-07T00:10:47.568368336Z Cancelled