Activity

From 05/31/2013 to 06/29/2013

06/29/2013

09:46 pm Arvados at the White House
On June 20th, 2013, Arvados was recognized by the White House Office of Science and Technology Policy at its "'Open S... Ward Vandewege

06/28/2013

05:32 pm Revision ec8c1f40 (arvados): fix tutorial bugs
Tom Clegg
04:42 pm Revision 63865a16 (arvados-dev): setup some ENV vars from gitolite.conf options...
makes things much easier in hooks and triggers Sitaram Chamarty
12:31 pm Revision e2b2f834 (arvados): fix doc link
Tom Clegg
12:04 pm Revision 8f4223c9 (arvados): point to doc.arvados.org tutorial if no local tutorials are set up
Tom Clegg
11:59 am Revision 73620270 (arvados): remove stub pages
Tom Clegg
11:58 am Revision dd126c77 (arvados): add "first job" tutorial
Tom Clegg
11:45 am Revision a94cf58e (arvados): add Data menu
Tom Clegg
11:45 am Revision ab25081a (arvados): collections does not need to be admin-only
Tom Clegg
11:34 am Revision eef040a6 (arvados): remove "add a new VM" button from non-admin VM index page
Tom Clegg
11:20 am Revision 8b3c15df (arvados): more specific info about VMs page
Tom Clegg
11:15 am Revision 4213f29c (arvados): use the same API host for all examples
Tom Clegg
10:29 am Revision 1325f4ad (arvados): update running and finished_at attributes at completion
Tom Clegg
10:29 am Revision 6440816f (arvados): document redis dependency
Tom Clegg
10:28 am Revision c93d9788 (arvados): chdir out of supervise dir when starting job
Tom Clegg
04:17 am Revision 36f80655 (arvados): add pgp-survey-import
Tom Clegg
01:41 am Revision 58260fe3 (arvados): add workbench favicon
Tom Clegg

06/27/2013

10:17 pm Revision f673058b (arvados): fix up default site name
Tom Clegg
04:06 pm Revision 6f24c814 (arvados): add pgp-survey-parse
Tom Clegg
04:06 pm Revision cdde7f24 (arvados): fixes and docs for testing crunch jobs locally
Tom Clegg
03:22 pm Revision 3a6b4e91 (arvados): fix human/humans inflection
Tom Clegg
02:52 pm Revision 32946532 (arvados): add Human resource
Tom Clegg
02:36 pm Revision 8e4ba50f (arvados): add Admin menu with Users and Groups
Tom Clegg
02:24 pm Revision 47edcef8 (arvados): remove "create new api client authorization" button
Tom Clegg
01:40 pm Revision 23da33ef (arvados): update dispatch docs
Tom Clegg
12:35 pm Revision 0577145e (arvados): fix editable + serialized-hash attributes
Tom Clegg
12:34 pm Revision ceff7430 (arvados): fix active/admin editables
Tom Clegg
12:04 pm Revision 278e6b7d (arvados): fix editable User attributes
Tom Clegg
11:53 am Revision fb3c428d (arvados): add trait resource
Tom Clegg
11:21 am Revision 716dd613 (arvados): add util class
Tom Clegg

06/26/2013

06:43 pm Revision 05e4093f (arvados-dev): help: include SITE_INFO in output
Tony Finch
04:27 pm Revision 9bd3ce87 (arvados): fix grammar
Tom Clegg
04:24 pm Revision cb775c17 (arvados): notify admin about new users
Tom Clegg
11:38 am Revision 5a061e8e (arvados): link JobTasks api page
Tom Clegg

06/25/2013

10:32 pm Revision 1f307eb3 (arvados): user#is_active fixes
Tom Clegg
10:31 pm Revision 17e5ba5f (arvados): activate admin users created before is_active flag existed
Tom Clegg
10:22 pm Revision c0e2292b (arvados): add user#is_active flag
Tom Clegg
08:27 pm Revision 11c77a4a (arvados): document passenger streaming setup
Tom Clegg
08:05 pm Revision 26e49e64 (arvados): add jobs#log_tail_follow
Tom Clegg
04:52 pm Revision 26174557 (arvados): fix permissions and bugs, use decompressed_name in output
Tom Clegg
04:51 pm Revision a5b113fa (arvados): add transparent gunzip support, fix string concatenation performance
Tom Clegg
09:26 am Revision eb0f567e (arvados): add transparent bz2 decompression, some tests and fixes
Tom Clegg
01:06 am Revision c503675c (arvados): docs and fixes
Tom Clegg
12:16 am Revision 86ba283a (arvados): reader fixes
Tom Clegg

06/24/2013

11:52 pm Revision cdeda99b (arvados): add missing newline at end of manifest
Tom Clegg
11:47 pm Revision 0e3d22d3 (arvados): fix KeyError in os.environ check
Tom Clegg
11:37 pm Revision e00389a4 (arvados): fix for bare repos
Tom Clegg
11:16 pm Revision 6b4f035a (arvados): hash and grep examples for new reader/writer tools
Tom Clegg
11:14 pm Revision aafb1a30 (arvados): add Reader classes, local storage mode, and basic test suite
Tom Clegg
11:14 pm Revision fa34e9f9 (arvados): use which to find crunch-job instead of hoping sudo preserves PATH
Tom Clegg

06/23/2013

09:21 am Revision fa988e24 (arvados): use find_or_create_by instead of rescue RecordNotUnique
Tom Clegg

06/22/2013

06:01 pm Revision f213d98b (arvados): update dev job docs
Tom Clegg
05:46 pm Revision dfcf762c (arvados): remove some leftovers from subversion support
Tom Clegg
05:43 pm Revision d151c607 (arvados): fix attempts to save dev job status in arvados db
Tom Clegg
05:39 pm Revision 1ab41d9d (arvados): fix dev job id
Tom Clegg
05:27 pm Revision e01ec69c (arvados): show full uuid even in uuid column on index pages
Tom Clegg

06/21/2013

02:37 pm Revision c1281d3d (arvados): add likely job dependencies section
Tom Clegg
12:45 pm Revision aeaecc3d (arvados): send git-archive from ctl to compute node instead of running git-pul...
Tom Clegg
12:43 pm Revision f4cc8a68 (arvados): work around sudo environment sanitizing
Tom Clegg
12:42 pm Revision 6ad0bb5d (arvados): update docs
Tom Clegg

06/20/2013

12:44 pm Revision 84eb1208 (arvados): configurable setuid for crunch jobs
Tom Clegg
12:14 pm Revision 482d0e7a (arvados): obey RAILS_ENV if given
Tom Clegg
12:14 pm Revision 799d4a91 (arvados): tweak daemontools scripts
Tom Clegg
11:56 am Revision 54e8449c (arvados): tweak daemontools scripts
Tom Clegg
11:16 am Revision dfb2cea7 (arvados): avoid sending html redirect to api client
Tom Clegg
11:15 am Revision 1dda7d8a (arvados): make dependency install instructions paste-friendly
Tom Clegg

06/19/2013

11:33 pm Revision bbc6c481 (arvados): add CollectionWriter and Keep classes to Python SDK
Tom Clegg
11:32 pm Revision 1e6934e5 (arvados): add missing attributes to keep_disk api response
Tom Clegg
10:29 pm Revision db324b94 (arvados): fix crunch script path
Tom Clegg
05:37 pm Revision de6d7ea9 (arvados): fix here-docs
Tom Clegg
03:39 pm Revision 29c67995 (arvados): update job intro
Tom Clegg
03:19 pm Revision 202818fc (arvados): remove stub notice
Tom Clegg
03:15 pm Revision a9657337 (arvados): remove emacs tmp file
Tom Clegg
12:54 pm Revision eda71ba1 (arvados): more crunch install instructions
Tom Clegg
12:37 pm Revision 6ab9cc0a (arvados): handle auth tokens with api_client=0 better
Tom Clegg
12:37 pm Revision 81ab1255 (arvados): fix http status for "not logged in" response
Tom Clegg
12:36 pm Revision 1a03dd7a (arvados): port crunch dispatcher from whjobmanager to crunch-job
Tom Clegg

06/18/2013

04:13 pm Revision b4d82272 (arvados): use arv instead of curl in admin cheat sheet
Tom Clegg
04:13 pm Revision d8488213 (arvados): always use https in workbench curl examples
Tom Clegg
04:06 pm Revision b466fa74 (arvados): fix up cli/curl example code
Tom Clegg
03:35 pm Revision e963acf5 (arvados): add trusted client info to install doc
Tom Clegg
01:56 pm Revision 031a6985 (arvados): update to new nav menu
Tom Clegg
01:56 pm Revision 5cb8074c (arvados): nav menus
Tom Clegg
01:56 pm Revision 649d7b2c (arvados): pluralize resource name in python example
Tom Clegg
01:56 pm Revision 9380896e (arvados): whitespace
Tom Clegg
12:17 pm Revision 0f2a2a7e (arvados): Fix ssh ProxyCommand lines.
Ward Vandewege

06/17/2013

09:17 pm Revision 91876456 (arvados): add python example to generic workbench object display page
Tom Clegg
05:40 pm Revision 99658f9c (arvados): add ApiClient#is_trusted, show list of api tokens in Workbench
Tom Clegg
11:37 am Revision bf7dfac6 (arvados): More tweaks for the ssh page.
Ward Vandewege
10:04 am Revision 04a262ff (arvados): Improve 'Setting up SSH access' instructions.
Ward Vandewege

06/14/2013

04:41 pm Revision 24751bfb (arvados): fix formatting
Tom Clegg
04:40 pm Revision f4756d26 (arvados): add unverified SSL certificate note
Tom Clegg
04:38 pm Revision b988ea48 (arvados): fix up formatting
Tom Clegg
04:37 pm Revision 1261c2a9 (arvados): update cli sdk doc, tweak json output options
Tom Clegg
03:44 pm Revision f27db79d (arvados): rename secret_token.rb -> secret_token.rb.example
Tom Clegg
11:42 am Revision f79db5d2 (arvados): update "application name" identifier
Tom Clegg
11:40 am Revision b9954010 (arvados): rename wh to arv
Tom Clegg
11:40 am Revision 4db4c688 (arvados): fix up wh tool
Tom Clegg
11:39 am Revision b2916e2c (arvados): fix up load_where_param
Tom Clegg

06/13/2013

04:54 pm Revision 97ee2e7b (arvados): add tutorials and references to home page
Tom Clegg

06/12/2013

02:53 pm Revision 2a64d9ed (arvados): add front page dashboard
Tom Clegg
11:46 am Revision 4e1f73e6 (arvados): add repositories#get_all_permissions
Tom Clegg
12:40 am Revision 4c7e1613 (arvados): move authorized_keys#get_all_logins to virtual_machines#get_all_logins
Tom Clegg
12:37 am Revision 741ca015 (arvados): improve error reporting
Tom Clegg
12:37 am Revision 1b712d27 (arvados): include csrf token with x-editable ajax
Tom Clegg

06/11/2013

05:35 pm Revision 296378c3 (arvados): show cli update example on generic object#get page
Tom Clegg
05:35 pm Revision d030c210 (arvados): add user->repo permission to cheat sheet
Tom Clegg
04:39 pm Revision 924e0697 (arvados): smarten up authorized_keys#get_all_logins response
Tom Clegg
04:39 pm Revision bfcdd38f (arvados): remove less critical nav items
Tom Clegg
04:26 pm Revision 6c00bfbc (arvados): More layout fixes.
Ward Vandewege
04:21 pm Revision 00225d6f (arvados): Layout fixes.
Ward Vandewege
04:20 pm Revision 380fc51a (arvados): Fix title for workbench install instructions.
Ward Vandewege
04:19 pm Revision 116dbb50 (arvados): always clear thread.current session info
Tom Clegg
04:18 pm Revision f5b8c4a9 (arvados): Merge branch 'master' of git.clinicalfuture.com:arvados
Ward Vandewege
04:18 pm Revision 626994c1 (arvados): Add workbench install instructions.
Ward Vandewege
02:32 pm Revision 9f3f8081 (arvados): Delete apps/workbench capistrano files; they have been moved to a
separate repository. Ward Vandewege
02:32 pm Revision 7ef850d1 (arvados): Whitespace.
Ward Vandewege
01:39 pm Revision 6b5eb565 (arvados): Be more explicit.
Ward Vandewege
01:28 pm Revision 12176d31 (arvados): Formatting fix
Ward Vandewege
01:00 pm Revision 63f9b537 (arvados): add Repositories resource, fix authorized_user attr name, some wb fixes
Tom Clegg
11:49 am Revision 59ca4f80 (arvados): More API server installation instructions.
Ward Vandewege
11:10 am Revision 9456c934 (arvados): Remove reference to orvosapi.com, replaced with arvadosapi.com
Ward Vandewege
10:28 am Revision 28ec8224 (arvados): Delete capistrano files; they have been moved to a separate repository.
Ward Vandewege

06/10/2013

03:30 pm Revision f5e7711b (arvados): add /authorized_keys/get_all_logins
Tom Clegg
02:21 pm Revision c0bc71f0 (arvados): fix current_user in model
Tom Clegg

06/09/2013

08:46 pm Revision 3405a938 (arvados): do not render attributes of non-owned objects with x-editable
Tom Clegg
08:42 pm Revision a557cb96 (arvados): add links#index, allow non-admin links#show
Tom Clegg
08:32 pm Revision 821055e7 (arvados): add users#index, allow non-admin users#show
Tom Clegg
08:24 pm Revision 18c923f2 (arvados): include links that reference me in links#index
Tom Clegg
04:03 pm Revision 0499ae1e (arvados): expose Keys, VMs, Jobs tabs to non-admin users
Tom Clegg
03:47 pm Revision 193aac2f (arvados): add admin cheat sheet
Tom Clegg
02:41 pm Revision 2499de6e (arvados): include indivually permitted objects in #index responses
Tom Clegg

06/08/2013

02:04 am Revision 8acdf166 (arvados): add VirtualMachine resource to workbench
Tom Clegg
02:04 am Revision 536b8d10 (arvados): add VirtualMachine resource
Tom Clegg
01:26 am Revision 055d6d2e (arvados): fix redirect/error behavior for session timeouts
Tom Clegg
01:25 am Revision d8fa0681 (arvados-dev): check file/dir existence before locking
check for existence of the object across all branches before creating
the lock. Helps catch silent typos which may m...
Darrell Thacher

06/07/2013

06:02 pm Revision 170e1e0a (arvados): more x-editable
Tom Clegg
06:01 pm Revision 33c3ccf1 (arvados): add insecure-https config option, improve error reporting
Tom Clegg
01:16 am Revision b80b65ea (arvados): implement destroy method in arvados model proxy
Tom Clegg
01:11 am Revision 10d1f3b4 (arvados): fix up editable stuff
Tom Clegg
01:10 am Revision b4770ab8 (arvados): add andand
Tom Clegg

06/06/2013

11:41 pm Revision 88d0dd00 (arvados): make authorized_keys editable on index page
Tom Clegg
06:44 pm Revision 295fc9c4 (arvados): tweak authorized_key#new
Tom Clegg
06:19 pm Revision b76f2e97 (arvados): add authorized_keys views and editable fields
Tom Clegg
05:46 pm Revision 43d640d6 (arvados): update bundle, bring in bootstrap-editable
Tom Clegg
03:37 pm Revision 3173f909 (arvados): add authorized_keys
Tom Clegg
02:49 pm Revision b75f8eaa (arvados): add AuthorizedKey resource
Tom Clegg
12:58 pm Revision b57b39f2 (arvados): fix logging of script_parameters and resource_limits
Tom Clegg
12:46 pm Revision 4141cf98 (arvados): use gmtime instead of unixtime to report timestamps
Tom Clegg
12:46 pm Revision 635831ff (arvados): check validity of script_version during job#update
Tom Clegg
12:46 pm Revision efd38914 (arvados): check child exit status
Tom Clegg

06/05/2013

04:50 pm Revision 392e3a77 (arvados): tweak node failure detection
Tom Clegg
04:46 pm Revision 042ea6bf (arvados): use IPC::System::Simple::capturex instead of system()
Tom Clegg
04:46 pm Revision 2bdfaf62 (arvados): fix "is undef" test
Tom Clegg
02:15 pm Revision cc87b47f (arvados): fix up quoting
Tom Clegg
02:15 pm Revision cf4dd2b6 (arvados): fix job output hash key
Tom Clegg
02:35 am Revision 046d0a13 (arvados-dev): create command should think of default roles also...
Some code is duplicated from 'set-default-roles' trigger but it's the
cleanest way to fix the problem.
Sitaram Chamarty

06/04/2013

01:54 pm Revision 35df19d1 (arvados): remove old cruft
Tom Clegg
01:54 pm Revision 5722c604 (arvados): retry requests after BadStatusLine
Tom Clegg
12:42 pm Revision ce1fbbee (arvados): run job tasks in qsequence order in first pass
Tom Clegg
12:41 pm Revision 7d6c76b0 (arvados): add "order" parameter to discovery document
Tom Clegg
12:41 pm Revision 8aef9fd7 (arvados): reject API calls with unsupported parameters
Tom Clegg
09:21 am Revision 412d9ab8 (arvados-dev): partial-copy: remove unused refs
Remove all refs from partial-copy that not longer exists in main.
Also remove all refs from partial-copy that are not...
Jan Weitzel
09:21 am Revision b2ebc9b0 (arvados-dev): fork command should add hooks from LOCAL_CODE if defined
Sitaram Chamarty

06/03/2013

04:50 pm Revision 1cabc3d2 (arvados): fix job_task update call
Tom Clegg
04:50 pm Revision 83fc8da3 (arvados): ignore client-provided kind and etag during update
Tom Clegg
04:50 pm Revision 3f08d96a (arvados): rename outputkey to output
Tom Clegg
 

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