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Storing and Organizing Data » History » Revision 14

Revision 13 (Tom Clegg, 04/04/2014 02:41 PM) → Revision 14/33 (Tom Clegg, 04/04/2014 02:42 PM)

h1. Storing and Organizing Data 

 Rough demo outline 

 # Automatic ingest from a POSIX directory to Keep 
 #* Access to existing staging area (e.g., remote NFS share) is arranged ahead of time as an admin/setup task 
 #* Optional(?) User can manage staging areas hosted inside Arvados 
 #* Someone (possibly 3rd party) uploads some files to the staging area via SFTP or whatever 
 #* Uploader does an API call to {something - ingestor app? directly to arvados api endpoint?}. In the endpoint?} 
 #* API call, the uploader call provides a tag (e.g., a sample ID) and a list of files, checksums, etc. 
 #* Ingestor daemon reads the data from the staging area and writes it into Keep; creates one collection per API call made by uploader 
 #* In Workbench the imported Datasets appear as Collections in the designated project 
 # My data gets into the right project as specified by the uploader (API call)  
 # Subscribe to notifications (by email and/or Workbench dashboard): when files start/finish uploading; when files are shared with customer; when files are downloaded by third party 
 # Move/copy collections between projects (Project RX1234, or Customer X’s files), tag them in destination project with the appropriate string (e.g., sample ID) -- defaulting to existing tag used in source project (e.g., provided at time of upload). 
 #* UI for presenting Groups as Projects/Folders 
 # “Anyone with this secret link can view/download” mode. Enable, disable, change magic link. Use cases: browser + “wget -r”. 
 # See log/overview of who has accessed your shared data (incl. “anonymous user” if using secret-link-to-share); when shared/unshared; when each upload started/finished -- for a single project, and across all projects