Orvos¶

Store, organize, analyze and share omic data.

Orvos is an open source platform for building large-scale cloud computing environments and working with NGS data and other biomedical big data. The platform provides services for data management, pipeline management, distributed computing, provenance, and high-performance analysis. It uses a horizontally scaling architecture designed to run on multiple cloud operating systems including Amazon Web Services and OpenStack.

Platform Overview
Introduction to Orvos
History
Technical Architecture
Data Manager
Content Addressable Object File Store ("Keep")
Pipelines
MapReduce Jobs
Web Dashboard ("Workbench")
REST API Server
System and Metadata Database
SDKs
Documentation

Getting Started
How to Get The Code
Source Tree Overview
Compute Node Setup
EC2 Compute Node Life Cycle
User Guide

Community
Mission, Philosophy and Principles
Governance
IRC and Mailing Lists
How to Contribute
Design Process
Roadmap and Release Plan

Legal
Licensing Terms
Website Privacy Policy
Website Terms of Use
Individual Contributor Agreement