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Anonymous, 04/10/2013 11:05 PM

1 36 Tom Clegg 
h1. Arvados
2 2 Anonymous 





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Arvados is an open source platform for building large-scale cloud computing environments and working with NGS data and other biomedical big data. The platform provides services for data management, pipeline management, distributed computing, provenance, and high-performance analysis. It uses a horizontally scaling architecture designed to run on multiple cloud operating systems including Amazon Web Services and OpenStack. 





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*Platform Overview*





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[[Introduction to Arvados]]





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[[Technical Architecture]]





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[[Data Manager]]





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[[Keep]] (content addressable storage system)





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[[Pipelines]]





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[[MapReduce Jobs]]





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[[Workbench]] (web dashboard / console)





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[[REST API Server]]





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[[System and Metadata Database]] 





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[[SDKs]]





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[[Documentation]]





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*Using Arvados*





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[[Download]] -- download the code





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"Getting started":http://doc.arvados.org/user/ -- sign up, log in to Workbench, log in to VM.





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[[Hello World]] -- run a sample analysis pipeline, then customize the analysis.





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"API Reference":http://doc.arvados.org/api/





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*Contributing and hacking*





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[[Source Tree Overview]]





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*Community*





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[[Mission and Principles]]





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[[Governance]]





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[[IRC and Mailing Lists]]





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[[How to Contribute]]





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[[Design Process]]





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[[Roadmap and Release Plan]]





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[[History]]





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*Legal*





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[[Licensing Terms]]





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[[Website Privacy Policy]]





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[[Website Terms of Use]]