175
2017-11-22 Sprint
2017-11-08
2017-11-22
  • [Composer] API server configuration option
    12521
    Feature
    2
    In Progress
    2
    175
    -c-a
    36
  • [keep-web] writable webdav
    12483
    Feature
    2
    In Progress
    2
    5.0
    5.0
    175
    -c-a
    36
  • keepproxy panic: send on closed channel
    12475
    Bug
    1
    In Progress
    2
    175
    -c-a
    36
  • Healthcheck endpoint aggregator
    12260
    Feature
    2
    Feedback
    4
    0.0
    0.0
    175
    -c-a
    36
  • [CWL] arv:RunInSingleContainer should take max() of ResourceRequirements of substeps
    11850
    Bug
    1
    In Progress
    2
    0.5
    0.5
    175
    -c-a
    36
  • [OPS] cgroup_enable=memory swapaccount=1 grub parameters are not being set
    12307
    Bug
    1
    In Progress
    2
    175
    -c-a
    36
  • Federated user identity which works across a network of Arvados clusters
    11453
    Story
    6
    In Progress
    2
    2.0
    2.0
    175
    -c-a
    36
  • [SDKs] [API] [keepstore] [keepproxy] Facilitate request tracing for arv-put
    12167
    Feature
    2
    In Progress
    2
    2.0
    2.0
    175
    -c-a
    36
  • Migrate Collections.properties to JSONB
    11908
    Story
    6
    In Progress
    2
    0.5
    0.5
    175
    -c-a
    36
  • Honor Retry-After headers on libcloud exceptions
    12318
    Bug
    1
    In Progress
    2
    175
    -c-a
    36
  • arv-get should abort on ctrl/C
    11519
    Bug
    1
    In Progress
    2
    175
    -c-a
    36
  • Multi-cluster project search
    12519
    Story
    6
    In Progress
    2
    2.0
    2.0
    175
    -c-a
    36
  • Symlink in output points to invalid location -- no such file or directory
    12606
    Bug
    1
    New
    1
    175
    -c-a
    36
  • [SSO] Update gem dependencies, especially Rails
    12559
    Bug
    1
    New
    1
    175
    -c-a
    36
  • [Composer] Make pull request to upstream with run-as-webapp configuration
    12527
    Story
    6
    New
    1
    175
    -c-a
    36
  • [Composer] js-git porcelain API
    12524
    Feature
    2
    New
    1
    175
    -c-a
    36
  • [Composer] New workflow / new command line tool buttons can be used
    12523
    Feature
    2
    New
    1
    175
    -c-a
    36
  • [Composer] Browse Arvados git repos
    12522
    Feature
    2
    New
    1
    175
    -c-a
    36
  • Update documentation to reflect split of FUSE driver into its own package
    12369
    Bug
    1
    New
    1
    175
    -c-a
    36
  • Update to standard libcloud 2.x
    12268
    Story
    6
    New
    1
    0.5
    0.5
    175
    -c-a
    36
  • All Arvados components should report their version
    10666
    Feature
    2
    New
    1
    175
    -c-a
    36
  • [CWL] RunInSingleContainer cwl.input.json needs to be consistent with pathmapper manipulations
    12601
    Bug
    1
    Resolved
    3
    175
    -c-a
    36
  • Workbench base URL for multi-site search results should be configurable
    12515
    Bug
    1
    Resolved
    3
    175
    -c-a
    36
71
Arvados Future Sprints
2020-01-01
2020-01-02
  • [API Server] Propagate priority of parent job (a-c-r) to children
    12574
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Bad dashboard time formatting - 60m == 1h
    12558
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Setting priority field through arvados-cwl-runner
    12526
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Contents of trashed projects are actually deleted once delete_at is past
    12414
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [API] Don't create an index if it exists already. Will break install if we manually added it,
    12510
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Add monitoring/alarm for failed/slow job dispatch & excess idle nodes
    12085
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [CWL] Run directly from git
    12060
    Story
    6
    New
    1
    71
    -c-a
    36
  • Collections/data access API
    12090
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Support SLURM parameter passthrough from CWL jobs
    12191
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • Different help listing for 'arvados-cwl-runner'
    12410
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Description column doesn't contain descriptions
    12077
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • Access Arvados projects under the "by_id" directory in keep mount
    12320
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [cwl] cwl-tool conditional implementation
    12409
    Story
    6
    New
    1
    71
    -c-a
    36
  • Document how to add EBS tmp disk to nodemanager configuration
    12360
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Document requirements for nodemanager token scope
    12358
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [nodemanager] Only looking at first 100 queued jobs
    12295
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL] Does not distinguish between keep references to File and Directory when selected in Workbench template
    12331
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Migrate to Slurm API
    12289
    Story
    6
    New
    1
    71
    -c-a
    36
  • Status endpoint aggregator
    12288
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] Strict checks for "@@" filter operand
    12251
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • Allow templating of the collection sharing web page
    12239
    Story
    6
    New
    1
    71
    -c-a
    36
  • Copying a project with a docker image doesn't copy the docker metadata
    12198
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Nginx config should speak JSON when returning its own response for unproxyable API requests
    11136
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • Deprecate / remove arv-web
    11794
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Update Pipeline Optimization wiki with CWL/Crunchv2
    11285
    Story
    6
    New
    1
    71
    -c-a
    36
  • Activating an account (setting is_active from false to true) does not email the new user
    12178
    Bug
    1
    New
    1
    71
    -c-a
    36
  • crunch-run handling non-group readable files in output directory
    12170
    Bug
    1
    New
    1
    71
    -c-a
    36
  • mandatory keep_web configuration missing from workbench install instructions
    12113
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Javascript SDK
    12089
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Improve wording of Keep error messages in Python SDK
    12082
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [node manager] failing test
    12058
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Node manager] Fix flaky integration tests
    12061
    Bug
    1
    New
    1
    71
    -c-a
    36
  • lost job log
    12051
    Bug
    1
    New
    1
    71
    -c-a
    36
  • CWL should check yml to make sure pdh's exist
    12047
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Be able to create a new collection based on a subdirectory in workbench
    12028
    Feature
    2
    New
    1
    71
    -c-a
    36
  • crunchstat-summary gives invalid min_cores recommendation
    12026
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Windows file system driver for Keep (arv-mount equiv)
    12017
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Find arvados-cwl-runner version easier in a container request
    12009
    Feature
    2
    New
    1
    71
    -c-a
    36
  • On the collections page indicate expiring collections
    11983
    Story
    6
    New
    1
    71
    -c-a
    36
  • [CWL] arvados-cwl-runner should support tagging output collection using properties
    11942
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • Timeout attempting to create job for component gatk-haplotypecaller-cram-gvcf: Net::ReadTimeout
    11843
    Bug
    1
    In Progress
    2
    0.0
    0.0
    71
    -c-a
    36
  • Error fetching collection (HttpError 422) during call to arvados.util.listdir_recursive
    11917
    Bug
    1
    Feedback
    4
    0.0
    0.0
    71
    -c-a
    36
  • [FUSE] high memory consumption (possible leak) in long-running arv-mount
    10584
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Update job stats to be more useful to end user
    10679
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] Remove async permissions code
    11705
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [R SDK] Create a Bioconductor/R SDK
    11876
    Story
    6
    New
    1
    71
    -c-a
    36
  • User accounts optionally have read-only access
    11875
    Story
    6
    New
    1
    71
    -c-a
    36
  • [OPs] Jenkins test run ordering issue
    11986
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Add a "Browse" tab that links to tree/master in repository#Show page
    11871
    Story
    6
    New
    1
    71
    -c-a
    36
  • Convert Collection properties column type to JSONB
    11884
    Story
    6
    Duplicate
    7
    71
    -c-a
    36
  • [Go] CLI programs should exit 0 after giving -help
    11863
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] incorrect text about log messages on empty collection
    11844
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Nodemanager] Improve status.json for monitoring
    11836
    Story
    6
    In Progress
    2
    0.5
    0.5
    71
    -c-a
    36
  • [Python SDK] Implement support for universal newline mode in Collections API
    11770
    Story
    6
    New
    1
    71
    -c-a
    36
  • Support schema.org/Google structured markup for datasets
    11745
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Standard convention for Nagios-compatible health check scripts kept alongside source for services
    11748
    Story
    6
    New
    1
    71
    -c-a
    36
  • Import Docker images without requiring Docker on client
    11724
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] The sort order of items on /pipeline_instances and /container_requests page is incorrect
    11716
    Bug
    1
    New
    1
    71
    -c-a
    36
  • CWL Expression Tool Javascript issue when using str.includes
    11692
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Using cwl, when you obtain files (file objects) from a directory listing they lose some fields when compare to files listed in cwl doc
    11691
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Provenance graph consolidates scatter steps
    11680
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Logs containers with undefined exit code
    11679
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch2] crunch-dispatch-slurm hits scancel too much
    11669
    Bug
    1
    In Progress
    2
    71
    -c-a
    36
  • [SDKs] Exceptions raised by Python SDK should include the "error token" if provided in the API response
    11668
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] publish python3-arvados-python-client packages
    11657
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Replace schizophrenic generic "groups" page with "roles" page that only creates/lists groups with group_class="role".
    5076
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [keepstore] Support X-Keep-Desired-Tier header
    11646
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [keepstore] Add "tier" field to volume config
    11645
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [node manager] not assigning weights
    11627
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Example CWL code for cwl-runner doesn't work
    11621
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] A cancelled container request page should show the "Re-run" button
    11609
    Bug
    1
    New
    1
    71
    -c-a
    36
  • arv-put detects symlinks to common files and directories to avoid duplicated uploads
    11605
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [API] [Wrokbench] set a default config.log_level
    11594
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] [Workbench] config option serve_static_assets to serve_static_files
    11593
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • a-c-r should log the command used to run the pipeline
    11581
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [crunch-run] Fix excessive memory use
    11583
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Delete old job/container logs in main server process, instead of rake tasks invoked from cron jobs
    11582
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [CWL] Allow "keep:" references on command line.
    11584
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Limit number of lock/unlock cycles for a given container
    11561
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Improve user page group memberships management [to be groomed]
    9441
    Story
    6
    New
    1
    71
    -c-a
    36
  • [CWL] [Workbench] Support for copying/moving pipelines
    11515
    Feature
    2
    New
    1
    71
    -c-a
    36
  • occasional API server badness: 'incomplete response received from application'
    11556
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API Server] Support for pulling Docker images and uploading them to Keep
    11742
    Story
    6
    Duplicate
    7
    71
    -c-a
    36
  • [Crunch2] Create workflow object for CWL runs which are initiated from the command line
    11741
    Story
    6
    New
    1
    71
    -c-a
    36
  • Support display & reseting of expiration dates for collections
    11740
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [FUSE] Integration test using real programs with complex write patterns.
    11558
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] Webhook callbacks for server-to-server communication
    11555
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [FUSE] Writable fuse creating conflicts with itself
    11553
    Bug
    1
    New
    1
    71
    -c-a
    36
  • workbench needs to handle API server timeouts better
    11548
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Excessive memory and time consumed by API and dispatch when container fields (like "mounts") are large
    11547
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] clean up stale/conflicting dns data from deleted node records
    11531
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Implement disk usage reporting for the administrator
    11524
    Story
    6
    New
    1
    71
    -c-a
    36
  • User activity page takes too long to load
    11523
    Bug
    1
    New
    1
    71
    -c-a
    36
  • "arv collection list" command parsing allows invalid lines
    11520
    Bug
    1
    New
    1
    71
    -c-a
    36
  • HTTP 503 status for planned downtime
    11508
    Feature
    2
    New
    1
    71
    -c-a
    36
  • bcbio NA12878 validation runs: job re-use failure with non-existant collection
    11495
    Bug
    1
    New
    1
    71
    -c-a
    36
  • bcbio NA12878 validation runs: failed steps due to being unable to setup container
    11494
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] container_requests#update alternately responds 422 or 404 for no apparent reason
    11470
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Support federated search across a set of Arvados clusters
    11454
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • Support rendering of CWL description fields with embedded markup
    11452
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDK] avoid interfering with socket open/close - use pycurl sockoptfunction instead of opensocketfunction
    11460
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDK] Resolve symbolic names to uuid/pdh (cwl + other tools)
    11442
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] UUIDs & PDHs should be hyperlinked
    11421
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] support text-mode open() in Python 3
    11419
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDK] tool for copying CWL file + input collections
    11410
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [arv-put] Lumpy / slow upload
    11405
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Network saturation
    11396
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] [UNC] Copying collections also copies metadata
    10123
    Feature
    2
    New
    1
    71
    11
    -c-a
    36
  • [arv-put] bad progress indicator
    11296
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL] Fails with $schemas referencing remote resources.
    11257
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] full text search on pipeline_instances table is extremely slow (wrong index?)
    11261
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] "arv group contents" produces a 404 error (seems to POST instead of GET?)
    11260
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Tests] Make workbench integration tests finish faster (at least in Jenkins)
    11251
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Writable collection files returned by Go SDK should be seekable
    11249
    Feature
    2
    New
    1
    71
    -c-a
    36
  • job_task creation fails with ApiError - HttpError 422 - ActiveRecord::StatementInvalid: PG::InternalError: ERROR: invalid memory alloc request size 1718630765
    11238
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Docker load time on compute node is too long
    11222
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Keep] Support multiple storage tiers
    11184
    Feature
    2
    New
    1
    3.0
    3.0
    71
    -c-a
    36
  • [Deployment] Use consul to report health of services/components
    11183
    Feature
    2
    In Progress
    2
    71
    -c-a
    36
  • [Nodemanager] Packaging for compute node setup scripts
    11171
    Story
    6
    New
    1
    71
    -c-a
    36
  • [GA4GH] Participate in workflow interoperability activities
    11163
    Story
    6
    In Progress
    2
    71
    -c-a
    36
  • [GA4GH] Support workflow execution API
    11162
    Story
    6
    New
    1
    71
    -c-a
    36
  • [GA4GH] Support task execution API using crunch v2 containers
    11161
    Story
    6
    New
    1
    71
    -c-a
    36
  • [GA4GH] Expose workflow records via tool registry API
    11160
    Story
    6
    New
    1
    71
    -c-a
    36
  • [GA4GH] Import from tool registry API
    11159
    Story
    6
    New
    1
    71
    -c-a
    36
  • [arv-put] When debug mode is active, report the cache file name being to be used
    11157
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docs] Document keepstore S3 volume configuration
    11155
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docs] Migrate install docs from command line flags to YAML configs (keepstore, keepproxy, keep-web)
    11154
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] create_token script should allow operator to provide token scopes and opaque comment
    11153
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Crunch2] Propagate dispatch error messages (e.g., sbatch fails) to user via logs/websocket
    11148
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Write scalability test which can be used periodically as needed
    11147
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Crunch2] [Workbench] Show slurm queue position of containers submitted to slurm but not yet running
    11146
    Feature
    2
    New
    1
    3.0
    3.0
    71
    -c-a
    36
  • apt-get upgrade arvados-api-server on Ubuntu 12.04 did not update crunch-job
    11137
    Bug
    1
    New
    1
    71
    -c-a
    36
  • "arv keep_service create" should go to an editor.
    11093
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Trying to copy a pipeline template to 9tee4 fails
    11075
    Bug
    1
    New
    1
    71
    -c-a
    36
  • "Run a example test" Button.
    11026
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] [Python] When reading data through Collection et al., signatures should refresh automatically when needed
    10008
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Document how to choose a suitable blob signature TTL
    11016
    Story
    6
    New
    1
    71
    -c-a
    36
  • [WB] 'Used by' tab empty when no graph is available
    11013
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [keep-web] configurable block cache size
    10998
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [CWL] Avoid using "+" char in mount paths
    10978
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • arvados-cli gem dependency error
    10955
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Live stats should use consistent coloring for graphs
    10948
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Switch from goamz to aws-sdk-go
    10477
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Crunch2] [API] return a more specific 422 error message when a client calls containers#unlock without having the lock
    10705
    Bug
    1
    New
    1
    71
    11
    -c-a
    36
  • [Docs] [SDKs] Mention in API docs and discovery doc that destroy=delete and index=list
    10946
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Spike] virtualenv arvados-cwl-runner
    10904
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Documentation] we should not use github.com copy of arvados in the tutorial
    10898
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [cwl] arvados-cwl-runner submitted job fails due to missing dependency futures>=3.0.5 in docker/jobs image
    10881
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch2] [Crunch1] Disable crunch1 APIs by default on new installs
    10865
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] [SDKs] When client and server versions differ, the server must either implement the API the client expects, or return an error.
    10849
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Support array type input parameters to Workflows
    10830
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Don't create manifest with 0 length chunk
    10809
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Notification of job completion
    10798
    Story
    6
    New
    1
    71
    -c-a
    36
  • [keepstore] Refactor volume Get/Put funcs to BlockReader/BlockWriter interfaces
    10794
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch2] Propagate error messages if sbatch command succeeds but crunch-run can't run (or can't log to the Arvados API)
    10729
    Bug
    1
    New
    1
    71
    11
    -c-a
    36
  • [arvbox] [arvados-ws] Make arvbox use the new arvados-ws
    10763
    Feature
    2
    Resolved
    3
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] pipeline_instance#show page should offer “Copy to project” and “Move pipeline instance” options like most other show pages
    10756
    Bug
    1
    New
    1
    71
    -c-a
    36
  • add a --user-script option to install-arvados-jobs-image
    10718
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docs] Missing docker_image link classes from API docs
    10721
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] "Public pipelines" on help menu links to wiki, not local public pipelines
    10715
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Deprecate arv-run
    10717
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Crunch2] crunch-run fails trying to set swappiness on ubuntu 1204 kernel
    10708
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Crunch1 jobs should still work on a slurm setup configured for Crunch2
    10689
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] Determine why bcl2fastq doesn't work with writable keep mount
    10035
    Bug
    1
    Resolved
    3
    1.0
    1.0
    71
    -c-a
    36
  • [Node Manager] Doesn't kill itself when unhandled exceptions are raised during actor setup
    8871
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Python SDK] Document undocumented methods in RichCollectionBase
    10650
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • Unable to build arvados-cwl-runner in 9tee4 environment
    10643
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL] a-c-r maximum recursion depth exceeded error
    10614
    Bug
    1
    New
    1
    71
    -c-a
    36
  • apps/workbench_functionals test failing
    10573
    Bug
    1
    New
    1
    71
    -c-a
    36
  • apps/workbench_integration test failing
    10572
    Bug
    1
    New
    1
    71
    -c-a
    36
  • services/nodemanager test_time_timout failing
    10571
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [crunchstat-summary] should not report 0% CPU and 0 RAM in cases where stats were not reported at all
    10570
    Bug
    1
    New
    1
    71
    -c-a
    36
  • arvbox destroy fails because some files are owned by root
    10566
    Bug
    1
    New
    1
    71
    -c-a
    36
  • sometimes `arvbox reboot test` gets stuck asking for a sudo password
    10561
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Collection file count & size information don't get dynamically updated on collection update
    10554
    Bug
    1
    New
    1
    71
    -c-a
    36
  • arvados-git-httpd returns error '500' (Internal Server Error) when a request is not authorized
    10552
    Bug
    1
    New
    1
    71
    -c-a
    36
  • arvbox loops forever when something goes wrong
    10545
    Bug
    1
    New
    1
    71
    -c-a
    36
  • implement approximate (estimated) counts for API list method
    10543
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Add support for Trash Bin
    10537
    Story
    6
    Duplicate
    7
    71
    -c-a
    36
  • [Keep] Share buffers between overlapping/consecutive GET requests for the same block
    10541
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • test suite hangs (in arvbox) in sdk/python test_callback
    10535
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Multiple links with the same relevant information can be created
    10532
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [crunchstat-summary] HTML plots should be a superset of text format output
    10531
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [crunchstat-summary] Add scales to graphs
    10530
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Integrate CI::Reporter to provide test output in JUnit XML format
    10525
    Story
    6
    New
    1
    71
    -c-a
    36
  • [crunch-run] use docker instead of docker.io
    10514
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Python SDK] Provide more control over pre-fetch behavior
    10493
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Multiple virtual machines with the same hostname can be created
    10469
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Document crunchstat-summary
    10458
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] Fix memory leak in Python SDK Collection class
    10445
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Performance][Workbench] While in a resource #show page, switching between tabs results in fetching the object again from API server. This can cause unacceptable amount of latency for large objects such as large pipeline instances and also to collections.
    10444
    Bug
    1
    New
    1
    71
    -c-a
    36
  • 4xphq keep balance api request causes oom on api server
    10408
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Node manager should fetch pricing information from cloud APIs
    10403
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [API] Remove unimplemented fields from api_client_authorization
    10405
    Story
    6
    New
    1
    71
    -c-a
    36
  • [CWL] Reduce redundant work with subworkflow RunInSingleContainer
    10402
    Story
    6
    New
    1
    71
    -c-a
    36
  • crunchstat-summary should explain why "(no report generated)" when possible
    10390
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Request collections that don't (yet) exist via fuse interface
    10388
    Story
    6
    New
    1
    71
    -c-a
    36
  • Faster downloading using arv-get
    10387
    Story
    6
    New
    1
    71
    -c-a
    36
  • In the arvados sso database, multiple identical clients can be created
    10386
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Add varchar_pattern_ops to all relevant PostgreSQL UUID indexes
    10354
    Story
    6
    New
    1
    71
    -c-a
    36
  • Get list of Arvados configuration parameters in puppet that could be published by Consul
    10358
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Enable refresh for "small" pipelines
    10355
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Import CWL workflow
    10344
    Story
    6
    New
    1
    71
    -c-a
    36
  • remove the need of yum reinstall from the installation/upgrade of Rails based components
    10337
    Bug
    1
    New
    1
    71
    -c-a
    36
  • arvados-cwl-runner fails to find secondaryFiles
    10327
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Don't assume Switchyard config for SSH explanation
    10320
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] list of logins in the admin page isn't showing all logins
    10319
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL] a-c-r option to resubmit failed jobs
    10328
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Crunch2] crunch-run config option to use arv-mount for output dir
    10313
    Feature
    2
    Resolved
    3
    71
    -c-a
    36
  • [Workbench] add a configuration flag to hide compute nodes
    10309
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Output glob "./" doesn't work as output from CWL workflow
    10308
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch2] [API] Accept collection UUID or PDH as container_image in a container request
    10298
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Centos7] [google_api_python_client] packaging with wrong permissions
    10296
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] [Workbench] Error out when unrecognized keys appear in config files
    10594
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Go programs] Error out when unrecognized keys appear in config files
    10282
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Pipeline instance shows wrong button labels in tab area
    10265
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL] Tries to run docker inside container where docker is not available, gives IOError
    10696
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDK] Convenience method for resolving project/file paths
    10268
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Performance][Workbench] Computing user notifications in topnav is expensive. Can the user's properties be used instead?
    10245
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Performance] Fetching the pipeline instance qr1hi-d1hrv-jl9fvzy3x8sdj8v seems to take too long
    10242
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Crunch1] Log the node properties at the start of a job
    10217
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Efficient queries for notification menu items
    10213
    Story
    6
    New
    1
    71
    -c-a
    36
  • [CWL] arvados-cwl-runner may not be handling input files on keep mount correctly
    10206
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Arvados should be able to cat/zcat files in collections easily
    10191
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDK] Writable file-like interface for collections in Go SDK
    10996
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Node Manager] Support ephemeral additional storage for Azure node types that do not have sufficient instance storage
    10183
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Provide more reasonable error messages for memory issues during container dispatch
    10182
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Crunch job output logging improvement stories
    10181
    Feature
    2
    New
    1
    71
    -c-a
    36
  • Confusing job duration reporting
    10177
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SSO] sso server adds multiple records without checking
    10167
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Jobs on dashboard say "No output" even when they have output
    10170
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Additional Crunch job logging controls
    10164
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Tests] Fix (occasionally) hanging crunch-run tests
    10162
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Automate starting/enabling services during Workbench and API package installation
    9960
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Packaging] Include sample config file (/etc/arvados/foo/foo.example.yml) with each configurable package
    10141
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [API] In each request log entry, report time spent getting current permission graph
    10127
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] crunch-dispatch log throttling should not apply to its own stderr
    10120
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Python RichCollectionbase's find_or_create() method callers may assume that found object is of "create_type" type
    10097
    Bug
    1
    New
    1
    71
    -c-a
    36
  • RichCollectionBase's _get_src_target method would crash if "source" argument is not basestring and "target_path" is empty.
    10096
    Bug
    1
    New
    1
    71
    -c-a
    36
  • keep-balance reporting large numbers of replicas lost
    10084
    Bug
    1
    New
    1
    71
    -c-a
    36
  • queued jobs in Paused pipeline instances start running anyway
    10083
    Bug
    1
    New
    1
    71
    -c-a
    36
  • pipeline_instance state can be changed from `Complete` to `Paused`
    10080
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] ContainerRequest#show crashes "undefined method `each' for nil:NilClass"
    10040
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Move Container related documentation from wiki to code
    10027
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Double-clicking "show version" link causes modal deadlock
    10018
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Retrieve all log content directly from API instead of pre-rendering in Rails
    10007
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] Python SDK should use a more recent version of the google api client library
    9989
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Testing] TestErrorDuringRsync_FakeDstKeepservers
    9985
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Testing] test_shutdown_declined_when_idle_and_job_queued flaky
    9984
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch2] [API] Permit container [request] with empty command (run default docker command)
    9969
    Bug
    1
    In Progress
    2
    71
    11
    -c-a
    36
  • [Crunch2] [API] Support container request expiry (expires_at)
    9968
    Feature
    2
    New
    1
    71
    11
    -c-a
    36
  • [CWL][Crunch][Crunch2] crunchrunner should ignore hidden directories when uploading to keep
    9965
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL][Crunch2][Crunch] crunchrunner should use CWL globs to output data to keep
    9964
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] arv-mount installation documentation not working
    9870
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] performance issues stat() in python
    9732
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] Undelete collections by moving them out of the TrashDirectory
    9591
    Story
    6
    New
    1
    71
    -c-a
    36
  • [keep-balance] Refuse to act when planning to delete data above an admin-specified threshold
    8179
    Story
    6
    New
    1
    71
    -c-a
    36
  • [keep-balance] Do not delete blocks referenced by collections with replication_desired=0
    9967
    Bug
    1
    New
    1
    71
    -c-a
    36
  • login-sync config file & systemd unit
    9958
    Story
    6
    New
    1
    71
    -c-a
    36
  • nodemanager systemd unit
    9959
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDK] Package Python apps as virtualenvs
    9945
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] file upload should provide progress bar for overall upload, not just individual files
    9937
    Story
    6
    New
    1
    71
    -c-a
    36
  • Workbench file upload should allow the selection of directories
    9936
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDK] portable_manifest_text() normalizes manifest, breaks CollectionReader() round trip
    9929
    Bug
    1
    New
    1
    71
    -c-a
    36
  • keep-balance fails with "Malformed index line" error
    9918
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] Python SDK duplicates resource attributes in top level of params
    9921
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] arv-put's default output includes both collection UUID and PDH
    8415
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] Improve metadata created by arv-put
    3311
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench UI] Pipeline instances should have a link to view the CWL file used.
    9802
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [CWL] Creating intermediate folders in working directory (fails in cwl-runner)
    9755
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] UI should advance to new step when user submits their input
    9750
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL] Secondary files entering into Arvados automatically
    9747
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Crunch2][Workbench] List both pipeline_templates and workflows on both pages
    9839
    Story
    6
    New
    1
    2.0
    2.0
    71
    11
    -c-a
    36
  • [CWL] cwl-runner parses nested arrays repetively
    9588
    Bug
    1
    Resolved
    3
    71
    -c-a
    36
  • [Workbench] Ability to add group from Groups admin page
    10142
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [keep-rsync] Rename "replications" to "replicas"
    9443
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [keep-balance] "Expedited delete" tool: perform garbage collection on some specific (recently deleted) collections, bypassing usual GC race protections
    9364
    Feature
    2
    New
    1
    3.0
    3.0
    71
    -c-a
    36
  • [CWL] arvados-cwl-runner should reuse the most recent run
    9362
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [CWL] Jobs crash when arvados/jobs:latest is not suitable to run CWL jobs
    9659
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch2] crunch-dispatch-slurm can't successfully dispatch work when run from a directory it can't write to
    9630
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch2] Document/fix handling of collections with non-nil expires_at field
    9278
    Story
    6
    In Progress
    2
    1.0
    1.0
    71
    11
    -c-a
    36
  • [Data manager] Verbose reporting
    8912
    Story
    6
    In Progress
    2
    0.5
    0.5
    71
    -c-a
    36
  • [Node Manager] huge virtual memory size
    8798
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Times out before API server loading active pipeline instances
    8504
    Bug
    1
    Feedback
    4
    0.5
    0.5
    71
    -c-a
    36
  • [FUSE] rmdir on CollectionDirectory sets expires_at
    9592
    Story
    6
    New
    1
    71
    -c-a
    36
  • [FUSE] Trash directory to list, inspect, and un-trash trashed collections
    9590
    Story
    6
    New
    1
    71
    -c-a
    36
  • [FUSE] Don't display expiring collections in regular collection listings
    9584
    Story
    6
    New
    1
    71
    -c-a
    36
  • [FUSE] llfuse thread can stay alive after umount, hanging tests
    9457
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] Make .arvados#collection available in collection subdirectories
    9245
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [FUSE] .arvados#collection is missing or outdated after writing inside collection
    9244
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] Add timestamp to arv-mount --logfile option
    8685
    Bug
    1
    New
    1
    71
    -c-a
    36
  • add key/value support for tags
    8641
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Provenance Tracking] jobs refer to collections by uuids, not pdh
    8317
    Bug
    1
    New
    1
    71
    -c-a
    36
  • get rid of dependencies python-pyasn1 python-pyasn1-modules
    7977
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] arv-mount is too slow for strelka
    7747
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] Write a Crunch2 wiki page
    7543
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Documentation] Write a Crunch wiki page
    7542
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Node Manager] Aggressively throttles node creation requests when the cloud region is full
    7479
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunchv2] python thread error after job success
    11027
    Bug
    1
    New
    1
    71
    5
    -c-a
    36
  • [NodeManager] CloudNodeListMonitorActor stopped reporting, and logs are not helpful enough to diagnose
    7667
    Bug
    1
    In Progress
    2
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] PySDK fails to load CAs for SSL verification when run inside Conda
    8669
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] crunch-job can miss the final log output of a job
    8721
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] When we give up trying to write a block, the next operation on the file should fail
    8148
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Bad URL quoting/parsing in File links from the pipeline template Components tab
    9156
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Python SDK] Add a Collection method to efficiently concatenate files
    9136
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Crunch] Limit maximum wait time between retries
    8774
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Crunch] [UX] Standard excepthook to help debug job problems
    7328
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] arv-copy fails to copy a Docker image specified with repo:tag syntax
    8315
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] The "Log" tab should have an notification that the job has been queued
    8901
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Node Manager] Less logging of tracebacks for routine exceptions
    8894
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] Bad compute node address detection on private networks
    8346
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] WebSocketClient Exception 'NoneType' object is not callable
    8388
    Bug
    1
    In Progress
    2
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] Log throttling shouldn't throttle logs from crunchstat, crunch-job
    8552
    Story
    6
    New
    1
    71
    -c-a
    36
  • [FUSE] Add --umask, --fmask, --dmask options to control file permissions
    7831
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] Bad use of RetryLoop in events.py
    9141
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDK] arvados.arvfile.readall_decompressed() does not return all blocks on a file
    7156
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] Job was repeatedly retried on same bad compute node until abandoned
    8869
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docs] Many tutorial instructions are wrong outside Curoverse clusters
    8387
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] No user profile should be required in the default configuration
    8830
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Docs] Document Git 1.7.10+ dependency for shell node and HTTPS Git cloning
    8778
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Docs/Workbench] Document how to clone repositories over HTTPS
    8781
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Docs/Workbench] Improve SSH agent documentation
    8775
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Hide file preview buttons when preview isn't possible with current keep-web config
    7743
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [PySDK] API client logs a warning when you create an object without an owner_uuid
    8885
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Node Manager] Broken nodes always get shut down, exempt from all node-counting considerations
    7980
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Node Manager] Shut down nodes in SLURM 'down' state
    8000
    Story
    6
    Resolved
    3
    71
    -c-a
    36
  • [NodeManager] Use sys.exc_clear() to release exception tracebacks
    8541
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Node Manager] Minimum idle time before node is eligible for shutdown
    8551
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Node Manager] qr1hi nodemanager can't start if ulimit is in place
    8686
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Node Manager] Doesn't convert units when determining if a job's scratch request is satisfiable
    8084
    Bug
    1
    In Progress
    2
    0.5
    0.5
    71
    -c-a
    36
  • [API] Go code to connect to the API server database and make basic sense of it
    8565
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] Go code to implement the Arvados API permissions model
    8566
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] List queries using "distinct" option return incorrect number of items_available
    8638
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Should not be necessary to host git repos on the same host as API server
    6772
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [FUSE] Listing a project directory is slow when there are many subprojects
    8189
    Bug
    1
    In Progress
    2
    71
    -c-a
    36
  • [FUSE] arv-mount should detect and log any files/dirs that are still open after unmounting
    8163
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [FUSE] Reset mount-tmp to the state of another collection
    7973
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Update run-command to use arv-mount --mount-tmp instead of staging directory
    7847
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [API] Job model validates that the script exists in the repository at script_version
    7621
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] Port arv-keepdocker to use the docker-py library
    9428
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] `arv keep docker` can upload an image already saved as .tar
    9045
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] `arv keep docker` can make links for an image already in a collection
    9147
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Clients can specify which auth config file to load.
    3897
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] PySDK one_task_per_input_file should support a num_retries argument
    7660
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] arv CLI program accepts "-" and "/path/to/file" as values for parameters that expect JSON (most notably the "body" parameter)
    8212
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] arv-copy continue on error
    8314
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDK] arv-copy better Git repository error reporting
    8313
    Story
    6
    New
    1
    71
    -c-a
    36
  • [FUSE] arv-mount exits non-zero if any I/O errors were returned
    8363
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Asset pipeline does not work unless config/environments/production.rb is present at buildtime and runtime
    6753
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] CSS+images missing on login_failure.html
    7312
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] crunch-dispatch should run the bundled version of crunch-job specified by Gemfile.lock
    7880
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] [Workbench] config:check catches and reports YAML parsing errors
    8195
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SSO] [API] [Workbench] Have config:check sanity check secrets
    7323
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] [Workbench] Check for nonexistent config params during rake config:check
    7694
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [CRUNCH] Fail gracefully when arvados repo doesn't exists
    8121
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Keep] keepstore status.json should report runtime environment
    7024
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Crashes with Fiddlesticks when trying to view a pipeline instance graph copied from another cluster
    7008
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] [Fiddlesticks] Live job log should show recent history
    5846
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Doesn't explain why a job can't be cancelled
    8399
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Show all known runtime_constraints in job status pane
    8091
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Node Manager] Detect and shut down nodes that fail provisioning in Azure
    8515
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Keep] Keepstore and keepproxy support HTTP Range requests
    3734
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [SDKs] [FUSE] Python SDK and arv-mount use Range requests when a caller requests part of a block that has been ejected from the cache
    8228
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [API] Job log cleaner should not clean logs when the job's log is the empty collection
    7127
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] Document that arv-copy accepts collection PDHs (ie content addresses) as arguments
    7818
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] Recursive pipeline instance arv-copy doesn't copy job objects, losing metadata
    7001
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] Unhelpful translation of script parameter outside script_parameters
    7600
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SSO] Template calls undefined method after fresh local accounts installation
    6868
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] Unhelpful 404 stack trace when trying to arv-copy a collection without access
    7418
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [git] "git clone https://..." with a bogus token should respond 4xx, not 5xx
    6780
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Keep-store] make keep-store lookup token at runtime like keep-proxy does
    7725
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] arv-copy continues copying when a collection's content address is wrong, but warns and exits a special code
    6968
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [SDK] arv-copy automatically creates new repository(ies) on the destination cluster
    5676
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] Teach arv-copy to copy whole projects
    6840
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] node visibility as admin vs ordinary user does not line up
    7400
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Keep] keepproxy should log real IP address
    7120
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • ubuntu package libarvados-perl should depend on libcrypt-ssleay-perl
    7823
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docs] Refresh Google OAuth2 setup in SSO install guide
    8330
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Docs] Install guide keepstore runit script has bad syntax
    8348
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] RVM and passenger recipes are missing details
    7129
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Deployment] arvados-api-server-upgrade.sh should set up git_repositories_dir
    6883
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [login-sync] Sets up settings.conf
    8344
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Documentation] Various small bugs in the CLI SDK install guide
    7170
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] Various small bugs in the install guide
    7356
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docs] keep-web runit script depends on sudo configuration
    8349
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] Clarify PostgreSQL setup commands for Software Collections users
    8331
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Docs] Install guide missing Websockets details
    8372
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Wiki] Clean up Computation_and_Pipeline_Processing page
    8621
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docs/Deployment] MUNGE, Nginx, PostgreSQL services don't start on boot on CentOS 6
    8683
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] Install guide incurs RVM's sudo wrath
    7575
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Docs] SSO install guide documents default_link_*
    8329
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] Install guide explains a few different deployment options
    7342
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Documentation] FUSE documentation should note granting FUSE permissions
    7230
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] Make keepproxy install guide follow nginx conventions
    6919
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Tests] Make slow tests optional (e.g., run-tests.sh --short)
    9017
    Feature
    2
    In Progress
    2
    71
    -c-a
    36
  • [Workbench] Many shell node instructions are wrong outside Curoverse clusters
    8386
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] view log via keep-web test fails in arvbox
    8223
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] specifying an invalid filter should result in an error
    7166
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Support numeric filter comparisons for numeric fields
    6992
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Synthetic collections include the "kind" field
    9150
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Deployment] Test distribution packages
    7184
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench/API] Does not derive key name from comments with whitespace
    8538
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] [Maybe] Update API server to support Git 1.7.2
    6922
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Node Manager] Mishandles stop signals
    7026
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Node Manager] a node filled up its /tmp which killed slurm and docker, node unusable. Node manager did not kill the node.
    6996
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Trying to update a collection by PDH raises a NoMethodError
    9143
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] "order" params should be rejected or used (not silently ignored) even when they reference columns missing from the "select" param
    6240
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Accept collection UUID as a job's docker_image constraint
    7695
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Finalize and document the collections/provenance and collections/used_by API calls
    9148
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Keep] keepstore should notify sysadmin about error conditions (trying harder than just log.Print())
    7232
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] Remove ruby dependency from arv wrapper
    4730
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] arv-copy should not require --dst-git-repo when copying on the same cluster
    4431
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] Python Keep block-r/w errors should indicate which collection/file was unreadable/unwritable as a result
    6276
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] arv-put progress meter scales based on file size, rather than being fixed to MiB
    6387
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] arv-copy raises an unexpected backtrace on ^C
    6959
    Bug
    1
    New
    1
    71
    -c-a
    36
  • Out of memory when using arv-copy not handled gracefully
    8065
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] Recursive arv-copy should report progress of the entire copy, in addition to individual objects
    8379
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] Refactor arv-get/put/copy into the Python "arv" wrapper using common exception-handling and argument parsing
    5468
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [SDKs] Ensure `arv keep put` replicates properly
    7476
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Go Keep client enforces a minimum transfer rate for proxy connections
    7477
    Story
    6
    New
    1
    71
    -c-a
    36
  • [FUSE] [SDKs] Ensure FUSE and other SDK clients work with a default replication level != 2
    7473
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Fetch all results with the CLI `list` command
    8502
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] arv get (and edit) should support a flag that suppresses display of non-writable attributes like "status" and "writable_by"
    8213
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] Add client-side join switches to `arv foo list`
    8501
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] GoSDK arvadosclient parameters are more transparent
    8498
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] PySDK Collection class lets you iterate files and subcollections separately
    8838
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Git credentials helper in CLI tools
    8780
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] CLI tools install tab completion aids
    8022
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] arv-copy copies all metadata associated with an object
    7394
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Can't `arv get` a collection by PDH
    9144
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Pagination sets limit on last page, causing unintended side effects
    7385
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Copying jobs causes "SubmitIdReused" error if submit_id is not null
    6439
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Project listings act like file manager directory trees, with expanding+collapsing trees
    8562
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Remove Keep disks link?
    6920
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Ability to create a new project when creating a new pipeline instance
    8560
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] User admin interface should show which VM(s) the user can login to
    7830
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] workbench move and copy is incomplete
    7002
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] warn user when navigation will cause input text to be lost
    7003
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Pipeline template description display is difficult to read when making a pipeline template instance
    6436
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Visible blanking between partial content reloads
    6363
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Change project "Jobs and pipelines" tab to just "Pipelines"
    8486
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Add an "invert selection" button to checklists alongside "un/select all"
    8221
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [git] Should be able to clone git repositories that are shared with "anonymouspublic" without authentication
    8318
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [FUSE] With --exec, expose the mount point in an environment variable
    7990
    Story
    6
    New
    1
    71
    -c-a
    36
  • [FUSE] arv-mount usage message shows incorrect order for [--exec ...] option
    8294
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] crunch-job does not sufficiently sanitize job parameter names when putting them in the environment
    7404
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [crunchstat-summary] jobs with tasks_per_node>1 need node size recommendations adjusted
    8151
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Keepstore] Support a portable data challenge API
    8181
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Keepstore] Don't trash/delete blocks until they appear on multiple trash lists
    8180
    Story
    6
    Rejected
    6
    71
    -c-a
    36
  • [API] Do not accept an empty SSH key as valid
    6601
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Project description styled differently based on whether or not the user can write to the project
    6571
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Keep] multiple response.Writeheader calls
    6991
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] `arv create` creates an object from an empty file
    6921
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Deployment] Update Rails package dependencies
    8327
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] Add Gitolite sanity check to install guide
    8058
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Docs] file_names Collection field is undocumented
    8873
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Deployment] .yml.example files should be consistent
    8328
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] Document installing the PySDK at a different PREFIX
    7158
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] A user with an older install may land in a page that requires the "latest" prerequisites.
    6886
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Displays content at the top of the dashboard, set by the sysadmin
    7468
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Provide an interface for the sysadmin to set Dashboard banner content
    7469
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] Provide an interface to delete files from collections
    7470
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Provide a CLI tool to add files to an existing collection
    7471
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] Provide a CLI tool to remove files from a collection
    7472
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] Advertise anonymous token in discovery document
    7141
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] Crunchstat and arv-mount print final stats before exiting
    7845
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Pipeline template listings should include links to the scripts
    7411
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Reusing ArvadosResourceList results in inconsistent results
    7100
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] CLI tools support Mac
    7439
    Story
    6
    New
    1
    71
    -c-a
    36
  • [GATK Queue] Support a mechanism to redirect stderr for children
    8773
    Story
    6
    Closed
    5
    71
    -c-a
    36
  • [Docker] API server starts before PostgreSQL is ready
    7000
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Docker] Bootstrap font fails to load in Workbench Docker image
    7007
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Docker] Fix SSO configuration in published images
    7006
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Docker] API server uses omniauth.rb for SSO configuration, not application.yml
    7005
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Docker] Workbench image doesn't serve HTTPS
    6998
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Keep] Write performance tests
    6784
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Performance] Compare Collection performance benchmarks across components
    6783
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] [Workbench] Generate debconf template from config yaml
    6782
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [FUSE][Performance] Job to md5sum 1TiB of 1MiB files in parallel is very slow
    6762
    Bug
    1
    New
    1
    71
    -c-a
    36
  • "This website is under heavy load" error makes a parsing error
    6651
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] Add a --replication switch
    7474
    Story
    6
    New
    1
    71
    -c-a
    36
  • [DRAFT] [Workbench] More encouragement for users to send feedback
    6570
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Keep] keepstore reboots GCE host under heavy load
    6997
    Bug
    1
    In Progress
    2
    71
    -c-a
    36
  • [Workbench] Provide a GUI interface to arv-copy
    6606
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDKs] Whenever `arv` has an invalid resource name argument, it should complain about that
    6599
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] [Webshell] Rough edges in web shell
    6574
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Anonymous user is listed in the "Share with users" popup when anonymous viewing is disabled, while "Share with groups" popup omits the anonymous group
    6677
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] document installation of node manager
    6635
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] webshell installation
    6649
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • Port arvados-libpam to centos
    6517
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] Add runtime option to SDKs (esp Python and arv-mount) to use a filesystem directory block cache as an alternative to RAM cache.
    3640
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [DRAFT] Provide one clear way for users to get data from an external source into Arvados
    5914
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] [API] Support "world-readable, but not world-searchable" permission on projects: "anyone with the link can view"
    6442
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] CLI SDK tools use Ruby SDK
    7099
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Allow additional curation of the public projects listing
    6405
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Deployment] [Documentation] Minimize system-wide dependencies for compute node setup
    6348
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] Go SDK locator regexp (and its tests) should agree with the documented format
    6318
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Node Manager] Booting nodes shouldn't satisfy min_nodes
    6313
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Maybe] [SDKs] Support caching Keep blocks in memcached
    6311
    Story
    6
    Rejected
    6
    71
    -c-a
    36
  • [FUSE] Support scaling the internal block cache based on number of open files
    6310
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Public project listing should exclude subprojects
    6307
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] [Workbench] Home project should be a real object (group with group_class="project"), not current_user.
    6274
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Add social sharing buttons to public projects [and other data?]
    6175
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Propagate old search engine meta tags in sync with Open Graph data
    6174
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Make public data crawlable
    6173
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Breadcrumbs can occupy multiple rows when the screen is narrow
    6172
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Support searching collections by their collection name
    6130
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Include a mechanism to automatically trust some clients
    6642
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] walk api server installations and ensure modified_at for collections is unique + ensure modified_at is enforced to be unique at the api level.
    6076
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Keep] Design: using Arvados to browse, and run jobs on, input data that is stored remotely (not on local Keep disks)
    5098
    Story
    6
    Closed
    5
    0.5
    0.5
    71
    -c-a
    36
  • [Keep] Use data stored remotely (not in local keepstore)
    5414
    Feature
    2
    Closed
    5
    3.0
    3.0
    71
    -c-a
    36
  • [SSO] Authenticate users with OAuth2
    6025
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Workbench] The collection information box values for content address and content size should be updated automatically after new file(s) are added via browser upload.
    6020
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] `ls` in a large home directory (4400+ items) takes too long
    6019
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [SSOs] Support authentication against multiple backend LDAP servers
    6015
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Keep] Use bufferpool in keepproxy to limit memory use when there are many concurrent PUTs
    5962
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • Slow to log-in to Workbench
    5952
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [DRAFT] [Workbench] Users can be notified about changes to important pipelines
    5949
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Workbench] Provide additional guidance to users running their first pipeline
    5947
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] "other collections have the same content" page is confusing
    5946
    Bug
    1
    New
    1
    71
    -c-a
    36
  • arv-get is slow for this collection
    5945
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • Syntax highlighting of viewing source in workbench
    5928
    Feature
    2
    Closed
    5
    71
    -c-a
    36
  • Keep errors
    5919
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • Fiddlesticks when trying to view a log file
    5923
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [SDKs] PySDK's internal decorators lose method metadata
    5907
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] collection#show performing too many unnecessary API server requests when accessing qr1hi-4zz18-zn1m6s2le7dqjfs.
    5908
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [API] crunch-dispatch should mark a job failed when its repository cannot be fetched
    5906
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] Improve certificate validation in Python SDK
    5905
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Workbench] collection#show is unresponsive for a large collection
    5902
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [API] Improve performance of large requests in parallel
    5901
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDK] Implement arvados.gettaskparam(*args) to match arvados.getjobparam(*args)
    5900
    Feature
    2
    Closed
    5
    71
    -c-a
    36
  • [FUSE] Catch and recover from any API client exceptions
    5897
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [FUSE] Ensure all I/O errors properly distinguish "not found" and other API errors
    5896
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] collections#index returns 504 Gateway Timeout
    5892
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Workbench] PipelineInstancesTest#test_Create_and_run_a_pipeline is not reliable
    5878
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Docker] Needs smarter dependency ordering when restarting existing containers
    5876
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Workbench] Mobile menus lack contrast (gray text on aubergine)
    5874
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] Run a local job using a docker image directly from the shell VM (without writing the docker image to Keep)
    5865
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [API] [DRAFT] Provide API methods for manipulating and combining collections
    5781
    Story
    6
    In Progress
    2
    2.0
    2.0
    71
    -c-a
    36
  • All clients authenticate directly against SSO server without going through API server
    5850
    Bug
    1
    Closed
    5
    71
    -c-a
    36
  • [Crunch] crunchstat should not report errors during normal timing races
    5523
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Relax repository name constraints to permit [-_.] -- ideally allow anything github allows
    5840
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Create new collection with selected files copy streams as well as files
    5828
    Feature
    2
    Closed
    5
    71
    -c-a
    36
  • [SDKs] [refactor] Dry up KeepService get() and put() in arvados/keep.py
    5788
    Story
    6
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] arv keep docker --download to get image from Arvados
    4223
    Feature
    2
    In Progress
    2
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Support entering boolean script_parameters when editing a pipeline instance
    5782
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [OPS] Routinely check for stale Gemfile.lock
    5769
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Websockets subscribe API should accept a start timestamp, so clients don't have to miss any events logged between the given start time and websocket connection success.
    5767
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Link to script sources on github when repository is a github url
    5841
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] [DRAFT] Fix clock/node time reporting on Workbench pipeline page
    3989
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [OPS] Add diagnostics script for shell nodes
    5740
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Node Manager] Reuse node records after shutting down the cloud node set up with them
    5736
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Replace type-specific #index pages with generic code
    5743
    Bug
    1
    New
    1
    2.5
    2.5
    71
    -c-a
    36
  • [Workbench] Provide a guided workflow to new users who want to upload data and run a public pipeline
    6058
    Story
    6
    New
    1
    2.5
    2.5
    71
    -c-a
    36
  • [FUSE] cd/ls sometimes takes too long on su92l
    5662
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] File access sometimes takes too long on su92l
    5713
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation] Document the minimum docker image / Dockerfile that can be used to run a job.
    5035
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] one_task_per_input_stream fails due to unsupported APIs. Remove it from docs, examples, and SDK.
    4696
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Missing link target in iframe error message
    5820
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Make Dashboard contents filterable
    5669
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Favorite projects, pipelines, collections
    5668
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Indicate related pipeline instances
    5667
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Link to log from pipeline and/or job summary page
    5665
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] 504 error returned when trying to create a large new collection
    5614
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Pipeline instance "Re-run with latest" button occasionally returns Not found page
    5235
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [FUSE] Support efficient copy at command line
    5778
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Log Graph - Feature requests
    4835
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Improve presentation of anonymously-viewed collections (via both "sharing link" and regular copy-and-pasted Location)
    5415
    Feature
    2
    New
    1
    2.5
    2.5
    71
    -c-a
    36
  • [API] [Workbench] [Performance] Use object caching to improvement performance (such as memcache).
    5624
    Story
    6
    New
    1
    71
    -c-a
    36
  • [DRAFT] [API] Good API for accessing the old_ and new_attributes in Logs table properties column
    5560
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [SDKs] PySDK test_rewrite_on_empty_file is not reliable
    5496
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] [Performance] Combining big collections should start returning a response faster (currently you can get a 502 proxy error even if the collection still combines)
    4943
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] Node went away unexpectedly during pipeline run.
    5381
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] Improve SDK documentation
    5621
    Story
    6
    New
    1
    71
    -c-a
    36
  • [API] Replace is_trusted attribute with a per-{user,client} flag which is set by the user on first login to a given client
    3040
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Crunch] crunch-dispatch should use the API instead of running in the API server's rails environment.
    5162
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [API] [Workbench] Add read-only ("locked") flag to projects
    5582
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [OPS] Use packer to generate docker images for our various services
    5118
    Feature
    2
    In Progress
    2
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Workbench should support viewing VCF files
    5511
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [DRAFT] [Crunch] User can configure task retries
    5510
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Change "recent pipelines" to curated selection of "public pipelines"
    5495
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Documentation] Run an uncommitted script straight from a working directory using arv-run-pipeline-instance --run-here
    5494
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Crunch] Job logs include node-level resource usage statistics (cpu, ram, swap, etc)
    5459
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [DRAFT] [API/SSO] Use externally-defined (e.g., LDAP) groups as permission groups
    5413
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Tests] Enhance keep testing to support signed locators.
    5428
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [SDKs] Add Python version test 2.7 <= sys.version_info < 3
    5137
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • Job failure due to 'arv-put' 'ConnectionError'?
    5515
    Bug
    1
    Feedback
    4
    71
    -c-a
    36
  • [Docs] Note apt key information in Python package READMEs
    5127
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [SDK] CLI tools should catch socket errors like "Connection refused"
    5327
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] arv-put --description X --properties P should set respective attrs on new collection.
    5201
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Testing] Make run-tests.sh able to run only unit tests or integration tests (or both)
    5254
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Testing] Add a new unit-test-only build step to the build pipeline, before the current test step that runs integration tests
    5255
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] Contain all job/task containers in a memory-limiting cgroup
    5540
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Node Manager] add one integration test for node manager
    5267
    Bug
    1
    Resolved
    3
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] arv keep put blows up when trying to put a danging symlink
    4957
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [OPS] Write a wrapper script that calls packer to generate customized docker images for a new installation (with IP ranges, hostnames, etc preseeded)
    5119
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Documentation] Fix Go SDK comments so they look reasonable in godoc
    5451
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] arv-run-pipeline-instance should accept project and title parameters
    5138
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] Show footer with date last updated
    5245
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] API token provided in query string should not be ignored just because the session already has a token.
    3625
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Tests] Provide a docker image, based on puppet/packer process, that can run the entire test suite quickly.
    5439
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [DRAFT] [Workbench] Improve provenance/used-by graphs so they are legible even for large pipelines / long provenance trails
    5387
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [DRAFT] [Workbench] Improve display of pipelines and jobs
    5384
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • Improvements to sortable log viewer
    3022
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Enable users to share with any other user
    5297
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Documentation] arvados VM simulator, demonstrating how it looks to use Arvados from CLI
    5382
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [DRAFT] [Workbench] Browse change history for records
    5316
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Docker] Auto setup as much as possible for new users
    5284
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDK] Go KeepClient offers a "read block" API that recovers from transmission errors by attempting alternate servers.
    5391
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Buttons should have consistent ctrl-click and right-click behavior
    5541
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Docker] Make API server root URL in discovery document easier to resolve
    5147
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Additional settings for ssh/config from Manage Account page
    5307
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Extend Sharing tab to collections
    5296
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Tests] Implement long-running keepstore services in run-tests, similar to what api got in #3021
    5260
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Tests] Reduce dependency on integration tests
    5259
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Public project page should encourage visitors to try using Arvados themselves
    5193
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Pipeline re-run dialog should offer docker image choices (latest/same), similar to script version choices
    5237
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] Use sphinx to render for Python SDK docs
    5214
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Tests] Add crunch-job functional tests to the CI suite
    4254
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] CLI tools fail or warn when current working directory is gone
    5134
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [DRAFT] [API] Enrich supported dataclass values for pipeline templates
    5142
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Workbench] User can trash and un-trash items
    5032
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [SDKs] arv-get should support getting multiple files by shell glob
    5139
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Crunch] Use uncommitted code in a git work tree to run a dockerized crunch job in a VM (using crunch-job or arv-run-pipeline-instance --run-jobs-here)
    5133
    Feature
    2
    New
    1
    2.5
    2.5
    71
    -c-a
    36
  • [Crunch] arv-run-pipeline-instance --run-jobs-here cannot run jobs with local script path in script_version.
    4048
    Bug
    1
    Closed
    5
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] Refactor run-command so it can be used as an SDK by scripts in a git tree
    4561
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [SDKs] CLI tools support project paths in addition to uuids
    5097
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [arv-mount] Change default mount type from "fuse" to "fuse.arvados"
    5036
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] improve error reporting for failed AJAX calls
    4938
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Suppress "ajax failed" error messages when ajax fails due to browser navigation event.
    3691
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Deployment] Switchyard should behave correctly when one SSH key has access to multiple VMs using different usernames.
    4989
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] File access on keep mount giving I/O error
    3948
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Tests] Eliminate system globals in test suites
    5233
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] after file upload, the files tab should refresh immediately (overriding the 15 second throttle)
    4770
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Prohibit leaving jobs in an inconsistent state (e.g., state=queued with non-null log or output)
    5026
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] CLI tests should be better isolated from user configuration
    4821
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Workbench provenance graph tabs appear empty when graph is very large
    4805
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Docker] fix @_NOT_FOUND_@ hack in config.rb
    5068
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Keep] Keepstore queries API server to verify tokens
    3532
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Merge "user agreement" and "required profile fields" into a single page
    4744
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Crunch] Automatically restart jobs after internal/intermittent errors
    5064
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Docker] Make it easy to add data from the host system to containers
    5025
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Pilot material design theme
    5007
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Make pipeline rerun UI more like jobs'
    5094
    Story
    6
    New
    1
    71
    -c-a
    36
  • [Node Manager] EC2 driver creates nodes configured to terminate on shutdown
    5065
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Node Manager] Don't reuse node table records
    4129
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] When showing a shared project, do not include "Home" in breadcrumbs.
    3573
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] Choose worker nodes where the desired docker image is already available.
    4935
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Tests] When comparing pipelines, the graph should highlight the differences by using different colors for pipeline A/B/both.
    4358
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Page for downloading collections with anonymous sharing link does not have any styling.
    5021
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Documentation/FUSE] Document '.arvados#collection' in shell VM keep mount
    4906
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] `arv keep docker` should pipe the data directly to Keep instead of store-and-forward, and provide some progress feedback up front in any case.
    5033
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Make "Compute and job status" pane update dynamically
    4881
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] File upload should start immediately, not wait for user to press "Start"
    5020
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] Quick turnaround time when updating a docker image in order to re-run a job
    4833
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] When using "Run pipeline" button at the top of project A, the pipeline template chooser should start out showing project A, not "All projects".
    4841
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Editable "name" column is presented but not actually available for "other" objects such as Human and Specimen.
    4923
    Bug
    1
    Resolved
    3
    71
    -c-a
    36
  • [SDKs] [DRAFT] arv-get with just one locator argument should download the entire collection
    4952
    Bug
    1
    New
    1
    71
    -c-a
    36
  • [Workbench] Collection content hash should stay up-to-date (e.g., while uploading files)
    4771
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] run-command should show helpful error message when task.foreach argument is not a list
    4726
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Discovery doc should fix its incorrect "list" method description to be identical to "index"
    4767
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Documentation] Run-command docs should remind user how & why to exit non-zero on failure.
    4579
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [SDKs] arv-put should assume --no-resume when --raw is given
    4669
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Tests] Diagnostics suite tests that live logs are displayed while jobs are running.
    4635
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Prompt user when logging in to a client for the first time.
    4692
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [DRAFT] [Workbench] Prevent CSRF and XSS attacks
    4690
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Search box on collections page should use infinite scroll instead of (broken) page number links
    3224
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Create and edit pipeline templates
    3490
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Projects dropdown should have a free text filter box
    4647
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] crunch-dispatch's Bundler environment infects non-Docker jobs
    4750
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Remove success and running attributes from job data model, since we are now using the state attribute.
    4729
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Websocket client should only subscribe to events about relevant objects, not all events.
    4700
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Show more (earlier) log entries for a running job
    4530
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Documentation] Introduce compute workflow / pipeline concepts in user guide
    4566
    Story
    6
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Documentation] Best practices for getting the most out of job re-use
    4508
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Documentation] Set of introductory tutorials each focused on accomplishing a simple task
    4531
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Documentation] Tutorial for adding a crunch script wrapper for an existing tool that is already hosted on github.
    3223
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Sortable column headings (filename, size) in collections#show
    4460
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Disable auto-refresh on tabs with infinite-scroll or editable content.
    3387
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Crunch] Do more error-checking and show more diagnostic info when installing a Docker image
    4494
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] CLI tool to view real time logs from running jobs/pipelines, much like the Log tab of the Workbench PipelineInstance#show page
    3980
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] "Add data from another project" modal supports regex filtering
    4808
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [SDKs] Option to watch logs (instead of exiting) when queuing a job or pipeline instance using arv job create, arv pipeline run, etc.
    4503
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] "Download" / "Save as" button for provenance graph
    4642
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Reveal log collection ID in pipeline/job summary and job Log tab
    3928
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Project show page should have buttons to add objects besides Collections
    3284
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [API] API method and CLI shortcut for refreshing the signatures on some block locators (without creating a collection)
    4650
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Display portable data hash, parent project, file count in Collection tables
    4393
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] Job detail page should show the job status when the job is not running or has completed running (button that shows 'queued', 'not ready', 'failed', 'complete', etc)
    4539
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [API] Arvados clients can use standard OAuth2 protocol instead of custom token handling mechanism
    4919
    Story
    6
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [Workbench] Each active job/pipeline on the dashboard should show how many worker nodes are allocated to it.
    4427
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Job view should include the relevant component name(s) from each pipeline where the job was used
    4289
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Pipelines that are in New or Ready state should show up somewhere on the dashboard, (e.g., in "Active pipelines" or "Recent pipelines" table).
    4514
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Make duplicate name error message more user-friendly
    4394
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Provide feedback on dashboard to indicate that NodeManager is booting a node.
    4446
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [SDKs] "arv recent [objectType]" lists recently modified objects
    4502
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Crunch] Pipelines should not fail immediately after one job failure, but continue running as much as possible
    4302
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [OPS] Improve and automate non-shared VM configuration
    4500
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Report a Problem" menu item does not like being opened in a new tab/window.
    4452
    Bug
    1
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Workbench] Don't show empty projects/collections when using the chooser dialog to select pipelines, files, etc.
    4516
    Feature
    2
    New
    1
    0.5
    0.5
    71
    -c-a
    36
  • [Tests] Websockets should work out of the box in test/development modes, even when using an ssh tunnel and a self-signed certificate.
    3101
    Feature
    2
    New
    1
    2.0
    2.0
    71
    -c-a
    36
  • [API] websocket clients should not put API tokens in path or query string
    3037
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [API] [Workbench] Site-wide regex searching
    4442
    Story
    6
    Resolved
    3
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Add a "docker images" page to Workbench that lists available docker images
    3125
    Feature
    2
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [API] [SDKs] Include provenance information for uploaded Collections
    4404
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [Workbench] [API] "Manage" permission should be sufficient to delete subprojects
    4182
    Bug
    1
    New
    1
    1.0
    1.0
    71
    -c-a
    36
  • [Workbench] Order by Collections "Name" column puts "folders" (collections containing files) at the top
    4350
    Story
    6
    New
    1
    71
    -c-a
    36
  • [SDKs] When editing a template in arv-edit and faced with a parse error, when trying again, it should automatically take you to the line/column of the error
    4349
    Feature
    2
    New
    1
    71
    -c-a
    36
  • [API] API method and interface to check if a bugfix is deployed on a cluster
    4175
    Bug
    1
    New
    1
    2.0
    2.0
    71
    -c-a
    36