-
Merge https://github.com/curoverse/arvados/pull/99New10.50.5
-
Update 1.4-dev branch with cherry picked bugs for 1.4.2Resolved31.01.0
-
[Workbench1] multi-site search broken due to bogus default baseURLResolved3
-
[arvados-dispatch-cloud] Add nodemanager->a-d-c instructions to upgrade notesNew11.01.0
-
[arvados-dispatch-cloud] Promote a-d-c from "experimental" to default in install docsNew11.01.0
-
[controller] Implement native Google login (configurable as an alternative to sso-provider)In Progress23.03.0
-
Identify Python 2 retirement migration workNew11.01.0
-
[config] Don't erase cluster config values just because their counterparts don't appear in legacy configsNew1
-
Update component .service filesNew1
-
[a-d-c] Long delay before cloud dispatcher starts jobs on playgroundNew1
-
Clarify that Arvados CLI tools are Linux onlyNew1
-
[API] Deprecate the @@ list method filterNew1
-
List of subprocesses limited in process viewIn Progress22.02.0
-
[API] User ownership reassignIn Progress21.01.0
-
[crunchstat-summary] Add arv-mount FUSE ops timeIn Progress20.50.5
-
[API] Unified user listing across all clusters in a federationNew13.03.0
-
Update migration and install docsNew13.03.0
-
[Workbench 2] Extend search UI to support vocabulary IDs as well as textNew13.03.0
-
[Workbench 2] Update property editing to use IDsIn Progress21.01.0
-
[Workbench 2] Update Fileupload component to new error reporting & unit test architectureIn Progress23.03.0
-
[a-d-c] needs to populate node.json in the container log collectionIn Progress2
-
Advanced Search editor keeps adding search terms instead of replacingNew1
-
[Workbench2] Automatically add local cluster to the remoteCluster configNew1
-
Support group operations on filtered listDuplicate7
-
[Data operation] Multi-value propertiesNew1
-
[Workbench] Version/ Debugging infoNew1
-
[Data operations] After adding a description on existing project "show full description" is not visible until is refreshedIn Progress2
-
[Workbench] Admin - Managing userResolved33.03.0
-
[Data operations] Filter project tree from projects that a resource cannot be moved toIn Progress2
-
[Data operations] Process status - filterIn Progress2
-
[Data operations] Adding no-predefined valueNew1
-
[Running a Workflow] Advanced Menu of a process is not workingNew1
-
Search bar filter shouldn't persist after clicking into a new projectNew1
-
[Admin functionality] Admin cannot see another user's content inside the trashNew1
-
[Running a workflow] Pre-defined collections do not show up in the list and cannot be deselectedNew1
-
[Data operations] "Open in new tab" is downloading on c97qkNew1
-
[Navigation] Attempting to navigate to non-existent path not handledNew1
-
[Workbench] Change the content inside the owner column from uuid to Projects and user namesNew1
-
[Navigation] Exclude child processesNew1
-
[Data operations] Missing info in the sharing pageNew1
-
[Running a workflow] Inputs inside subprocesses are not displayed.New1
-
[Data operation] Folders uploadNew1
-
[Data operations] Removing files during uploadResolved3
-
[Looking for data and advanced search][Multi Site Search] - Show Projects from different Arvados instances in left side tree navigationResolved3
-
[Data operations] Modal with inputs inside the collection view presents empty fields.Resolved3
-
[Custom pluggable viewers] Disable use of default file-viewsers-config.json fileResolved3
-
[Workbench] Backlog refinementClosed52.02.0
-
[Data operations] Consider different approaches for creating new elementsClosed52.02.0
-
[Data operations] Filtering by process statusClosed5
-
[Workbench] Link container UUIDs from details panelClosed5
-
Add the PDH to the collection view.Closed5
-
Advanced search hardcoded clustersClosed5
-
[Config] Config files deploymentClosed5
-
[packages] workbench dev package not being builtNew1
-
[API] Accept configured SystemRootToken without doing a database lookupNew1
-
[WB2] Support multiple values for a given property keyNew1
-
WB2: starting process should also show in which project the process would be startedNew1
-
[docs] Properly document user/group management using command lineNew1
-
[Workbench 2] Support multi-select operationsNew1
-
[Workbench 2] Right clicking on a node in the navigation tree should select itNew1
-
[Workbench 2] Owner field in Details pane should contain name and should link to correct locationNew1
-
[arvados-dispatch-cloud] deploy/run correct version of crunch-run binary on worker nodesNew1
-
[keep-balance] [keepstore] Report blocks/bytes in trashNew1
-
[WB2] Add /all_processes pageNew1
-
[Workbench 2] Implement UI for new group permission schemeNew1
-
[Workbench2] Improve error handling and reportingNew1
-
Extend vocabulary support for properties to support strong identifiers and multiple labelsNew1
-
wb2 workflows run in "Workflow runs" project by defaultNew1
-
[doc] explain lifecycle of Keep blocks, and how it affects storage backend usage/costNew1
-
[CWL] test_with_arvbox integration tests use tests inside imageNew1
-
Staging a large number of files with "loadListing: no_listing" still takes more than 30 minsNew1
-
Compute and store per-file checksumsNew1
-
[Workbench2] Integration testingNew1
-
[Workbench2] LoggingNew1
-
[CWL] Register workflow and run from git repoNew1
-
Paginate crunchstat-summary HTML outputNew1
-
[cwl] Implement (or just document?) safer bash defaults for CommandLineToolsNew1
-
run-test.sh can run offlineNew1
-
mounts->tmp->device_type is unimplemented, should not be documented as if it wereNew1
-
[doc] our documentation still refers to outdated config.yml parametersNew1
-
Synthetic database generator toolNew1
-
[arvados-dispatch-cloud] loopback driverNew1
-
run-tests.sh can populate/use local package cache directoriesNew1
-
ExpressionTool can be explicitly run under a CRNew1
-
Better CWL onboardingNew1
-
[Epic] Workbench2 has reached feature parity with Workbench, so that that latter can be deprecatedNew1
-
[workbench2] Test run, package building & deploy integrationNew1
-
[API] add integration test for new user signupNew1
-
[Data operations] Chooser supports browing/picking projects/collections on federated clustersNew1
-
Port arvados-pam to Python 3New1
-
[Workbench] No errors reported when file is missing a blockNew1
-
Internal Server Error: https://workbench.xxx/themes/curoverse/images/etc/passwdNew1
-
Federation diagnostic tools/APIsNew1
-
[cwl] expressions in keep_cacheNew1
-
[cwl] a-c-r set TTL on final output collectionNew1
-
[cwl] a-c-r supports --js-consoleNew1
-
[keepstore] Return 5xx (not 4xx) if block is not found due to transient backend device failureNew1
-
[Crunch2] Post-run hooksNew1
-
Invalidate tokens federation-wide on when invalidated on home clusterNew1
-
[Workbench 2] Add support for setting trashIntermediate value on workflowsNew1
-
Dockerize unit testsNew1
-
[keep-balance] [keepstore] Procedure to halt/reverse/investigate a suspected data loss incidentNew1
-
[Crunch2] Can issue container request to pull and import Docker imagesNew1
-
[SSO] fails to start with Ruby 2.4 (future of the SSO server)New1
-
[SSO] Upgrade to Rails 5New1
-
[controller] [all services] Publish entire config including secretsNew1
-
Update search API to support OR queries across text and vocabulary IDsNew1
-
Migrate existing vocabulary property data to new ID schemeNew1
-
replace epydocNew1
-
[documentation] config.yml needs to be documented on doc.arvados.orgNew1
-
[arvados-cloud-dispatch] commit 115cbd6482632c47fdcbbbe4abc9543e7e8e30ec breaks API host loadingNew1
-
[SDKs] [R] Missing stylesheet in R SDK docsNew1
-
[Workbench2] Show the version number in workbench2New1
-
[Epic] Use one cluster configuration file for all componentsNew1
-
[API] API call or script to show why jobs didn't reuseNew1
-
[Workbench2] Linking to collections in input object display, recording uuids of input collectionsNew1
-
[Epic] Kubernetes supportNew1
-
[API] searching for "test" on c97qk takes a long timeNew1
-
[CWL] Reduce memory footprint by using webdav to get file/dir listings in collections (instead of Python SDK)New1
-
[arvados-dispatch-cloud] GCE driver (Google Compute Engine)New1
-
[SDK] Maintain Arvados SDKs in BiocondaNew1
-
[Crunch2] Retain references + permissions to earlier containers when retrying a container requestNew1
-
Send real time container logs to a suitable log distribution system (instead of adding rows to the postgres logs table)New1
-
postgresql 10.x compatibilityNew1
-
Log stats for the entire node lifecycleNew1
-
Copying a container request should link to the original container requestNew1
-
[CWL] Requirement for storage classes of dataNew1
-
[crunchstat-summary] Support multiple data series per graph (e.g. TX/RX, user/sys CPU, etc)New1
-
[arvados-cwl-runner] Inaccessible collection causes long tracebackNew1
-
Workbench/API Authentication issueNew1
-
[keepstore] Do not try to trash blocks that were already trashed in previous sweepNew1
-
[api] send e-mail notification to user when their arvados account is activatedNew1
-
[api] after deleting a container object, it is impossible to fix/delete the corresponding container requestNew1
-
CWL v1.1 specifies directory listings are orderedNew1
-
[keepstore] ManagementToken is not documented in the --help outputNew1
-
[API] Avoid long-running transactions when sweeping trashed objectsNew1
-
[controller] refresh manifest APINew1
-
[API] Reduce privilege exposure via API tokens in multi-cluster workflowsNew1
-
[CWL] Resolve symbolic names to collectionsNew1
-
[Running a workflow] Input presetsNew1
-
[CWL] Use streamable flag as a hint to use keep outputNew1
-
[crunch-dispatch-slurm] option to set job priority directly instead of using nice valuesNew1
-
[CWL] arvados-cwl-runner should support tagging container requests using propertiesNew1
-
[API] Container request can provide existing collection UUID that will accept CR outputNew1
-
[Controller] Keep database in tuneNew1
-
[Spike] [Controller] Port "update workflow" API to controllerNew1
-
[keepstore] Cached block fetch for federationNew1
-
[Controller] Port "collection update" API from RailsNew1
-
[Controller] Port "collection update" functional tests from Rails API to controller test suiteNew1
-
crunch-dispatch-slurm does not warn when slurm MaxJobCount reachedNew1
-
crunch-dispatch-slurm / Go SDK Dispatcher not able to "let go" of deleted containersNew1
-
Make keep-web documentation available on doc.arvados.orgNew1
-
Listing collections by PDH and name can be very slowNew1
-
Workbench takes new users to inexistant tutorialNew1
-
[API server] Implement request throttlingNew1
-
Default keep cache scales with machine sizeNew1
-
Discovery document inconsistenciesNew1
-
Document strategies on how to use existing resources to save user preferencesNew1
-
[CLI] arv traceback on simple timeoutNew1
-
[Node manager] shutting down nodes when there is a wishlist for same size nodesNew1
-
Build Docker images without requiring Docker on clientNew1
-
[API] groups#contents response should obey caller-provided order (not sort on type first)New1
-
[keep-web] (webdav) Support COPY and MOVE between collectionsNew1
-
[Workbench] Search users by email address and shell accountNew1
-
Provide more information to SLURM to make scheduling decisions on HPCNew1
-
[CWL] Developer docs for arvados-cwl-runnerNew1
-
[Composer/Workbench] Import of public git repo to a new Arvados repositoryNew1
-
[STORAGE-CLASES] Report the storage classes used by a pipelineNew1
-
crunch-run takes a very long time for CWL steps with large numbers of File inputs - could use a new kind of mounts entry to address thisNew1
-
[Documentation] Higher Level Python SDK Reference PageNew1
-
Python SDK must have docstrings for all public interfacesNew1
-
[Python SDK] Retry on HTTP 5xx errorsNew1
-
[arv-mount] avoid excessive memory consumption of idle arv-mountsNew1
-
[cwl] a-c-r should log useful information on failure even with --quietNew1
-
No timeout is specified in A.C.R or as a default in the python sdkNew1
-
[Workbench2] View/copy/expunge previous versions of a collectionNew1
-
Document API in API discovery documentNew1
-
[Workbench] Self serve account mergeNew1
-
[Epic] Easy cluster installNew1
-
[Epic] Zero-downtime upgradeNew1
-
[API] Add "authorizations" tableNew1
-
--ignore-docker-for-reuse not passed to crunch v2 jobs started via --submit --no-waitNew1
-
As a data provider, I would like the ability to provide metered access to my data on Arvados, including start/end dates, bandwidth caps, and % of file accessedNew1
-
As a CWL learner, I would like to be able to run CWL workflows easily on cloud.curoverse.comNew1
-
Support Bitbucket git repo access from ComposerNew1
-
[WebDAV] WebDAV performance enhancementsNew1
-
[keepstore] Limit entire process to configured amount or % of system memory (replace -max-buffers=X)New1
-
[SDKs] Remove arvadosclient and keepclient librariesNew1
-
[SDKs] Wean all components off old arvadosclient and keepclient librariesNew1
-
containers are not reused unless runtime constraints (including RAM) match exactlyNew1
-
Fix misleading crunch file upload messagesNew1
-
Notify Composer user when file changedNew1
-
[SDK] Reduce collection class memory footprintNew1
-
[Crunch2] All stdout gets the same timestamp and other logging problemsNew1
-
[Workbench] Ensure that running processes are visible on the dashboardNew1
-
[Workbench] page with a view of all the top level container requestsNew1
-
[keep] Investigate using signed URLs to delegate access to cloud bucketsNew1
-
[crunchstat-summary] broken option for skip child jobs?New1
-
[Node Manager] Behave smarter in environments where scratch space can be arbitrarily sized, like GCP and AWSNew1
-
[API] fix race between arrival of trash time and next sweepNew1
-
install docs for keepproxy are out of dateNew1
-
[keep-web] Accept /t=token/c=collection/path (currently only /c=collection/t=token/path)New1
-
[API] Associate multiple identity_url from SSO with same userNew1
-
Collections/data access APINew1
-
arv-mount by_tag directory support for propertiesNew1
-
[Composer] Refactor to separate vendor-specific pieces and all them to be replacedNew1
-
Status endpoint aggregatorNew1
-
Activating an account (setting is_active from false to true) does not email the new userNew1
-
[CWL] running expression tool on arvados doesn't return proper outputNew1
-
[Python SDK] Implement support for universal newline mode in Collections APINew1
-
Standard convention for Nagios-compatible health check scripts kept alongside source for servicesNew1
-
Pull Docker images without requiring Docker on clientNew1
-
[Deployment] Use consul to report health of services/componentsIn Progress2
-
[API] [arvados-ws] remove all websockets and puma related code from the api server codebaseNew1
-
Integrate CI::Reporter to provide Ruby test output in JUnit XML formatNew1
-
Document crunchstat-summaryNew1
-
crunchstat-summary should explain why "(no report generated)" when possibleNew1
-
[Crunch2] [API] Accept collection UUID or PDH as container_image in a container requestNew1
-
[API?/Workbench] Search for a link tag value returns linked objectsNew1
-
crunchstat-summary should calculate averages of all metricsNew1
-
[Node Manager] Aggressively throttles node creation requests when the cloud region is fullNew1
-
[Python SDK] Add a Collection method to efficiently concatenate filesNew1
-
Copying a project with a docker image doesn't copy the docker metadataNew1
-
[SDKs] Use sphinx to render for Python SDK docsNew1
-
[SDK] Merge Go ArvadosClient and arvados.Client and migrate to arvados.ClientNew1
71
Arvados Future Sprints
2020-01-02
2020-01-01
A pseudo-version to collect tickets from multiple projects
-
[Workbench 2] "Load more" button on search results page always showsNew1
-
Update group sync tool for new group permission schemeNew11.01.0
-
[FUSE] Unhandled exception while getting discovery docNew1
-
Revise group permissions to separate them from permissions on managed objectsNew15.05.0
-
[FUSE] occasional deadlock in tests.test_unmount.UnmountTest.test_replaceNew1
-
[API] "DefaultReplication: 0" should be an errorNew1
-
[Workbench2] Unit testingNew12.02.0
-
[CWL] Run from original CWL, not packedNew13.03.0
-
[API] Remove the @@ list method filterNew11.01.0
-
[WB2] Show correct arvados version/commitNew1
-
[WB2] Notify the user when websockets service is disabledNew1
-
[workbench2] Run workflow inputs issuesNew1
-
Switch all Workbench tests from PhantomJS to Selenium/FirefoxNew11.01.0
-
Support browsing of projects shared with me in WebDAVNew12.02.0
-
[Controller] Delegate new container requests to other clusters based on location of input dataNew13.03.0
-
Outputs of workflow runs get put into a default location other than the user's home projectNew12.02.0
-
Design new vocabulary file formatNew1
-
[Keep] expose backend latency stats in the Prometheus metricsNew12.02.0
-
[API] If enabled by user via "preferences" checkbox in Workbench, notification service sends email to owner when a workflow finishes, fails, or is failingNew12.02.0
-
[SSO] Use cluster configNew12.02.0
-
[pam] PAM module in GoNew13.03.0
-
Deprecate & remove human, specimens and traits tablesNew12.02.0
-
[Epic] Replace and delete sso-providerNew1
-
[Epic] Port to Python 3 to prepare for Python 2 sunsetting in December 2019In Progress2
-
[keep-balance] Avoid deleting recently-referenced blocksNew11.01.0
-
Update AngularJS to a supported versionNew12.02.0
-
Upgrade jQuery to a supported versionNew13.03.0
-
[docs] better explain the relationship between API server, controller and nginx in install docsNew1
-
[Spike] Evaluate alternatives for Composer functionality in Workbench2New11.01.0
-
[API] Support multiple load-balanced API server nodesNew12.02.0
-
Log crunch-run resource usage statisticsNew12.02.0
-
Prevent the API server and database from continuing to serve requests to clients after timeoutNew10.50.5
-
run-tests.sh skip python/go env setup, don't print skipped testsNew1
-
[Keep-web] Support CORS requests with Authorization headersNew10.50.5
-
[Crunch2] Azure driver supports attaching extra storageNew12.02.0
-
[Keep] Support multiple storage classesIn Progress2
-
[Workbench] Child containers run on federated clusters do not show upNew13.03.0
-
[API] Strict checks for "@@" filter operandNew11.01.0
-
Merge Workbench2 repo into Arvados repoNew1
-
[crunch-dispatch-cloud] Run multiple containers concurrently on a single VMNew12.02.0
-
Refactor crunch2 loggingNew12.02.0
-
Multi-site (federated) object search in controllerNew13.03.0
-
Nodemanager reads instance sizes from the system config file to avoid duplicationNew12.02.0
-
[crunch-run] Cancel container on FUSE errorNew12.02.0
-
a-n-m spawned a container on the wrong sized nodeNew1
-
[nodemanager] Be quicker applying fixup for node featuresIn Progress2
-
[Epic] Replace SLURM for cloud job scheduling/dispatchingNew1
-
Document web socket server API (v0)New11.01.0
-
Review dependencies to make sure that they meet requirementsNew1
-
[Crunch2] [API] Specify which user's credentials should be used by a containerNew1
-
[Workbench] Support display & reseting of expiration dates for collectionsNew12.02.0
-
[keepstore] Write new blocks to appropriate storage classNew11.01.0
-
Benchmark container_request creation and see if there are opportunities for optimizationIn Progress2
-
arvbox warn if running as root or on OS XIn Progress2
-
keepstore -help entry for -dump-config is unclearNew1
-
[keep-web] read/write support for /by_id and /usersNew12.02.0
-
[keepproxy] document limiting maximum number of HTTP connectionsNew10.50.5
-
Support SLURM parameter passthrough from CWL jobsNew12.02.0
-
[CWL] arvados-cwl-runner should support tagging output collection using propertiesIn Progress21.01.0
-
crunch-dispatch-slurm uses a surprising number of file descriptors, and stops dispatching when it gets a "too many open files" errorNew1
-
Investigate packrat to lock down R package dependenciesNew1
-
R SDK submit to BioconductorNew1
-
Provide configuration knob to disallow external access through keep-proxyIn Progress2
-
Can't create user group with the same name as a top level projectNew1
-
[Composer] Production build fails to loadNew1
-
keepstore no longer functioning with repeated errors: http: Accept error: accept tcp [::]:25107: accept4: too many open files; retrying in 1sIn Progress2
-
[Crunch2] Node record's crunch_worker_state field is not populatedNew1
-
[Workbench] Bad dashboard time formatting - 60m == 1hNew1
-
[API] Don't create an index if it exists already. Will break install if we manually added it,New1
-
[crunchv2] Improve crunch-run environment reportingNew1
-
arv-get should abort on ctrl/CIn Progress2
-
[cwl] cwl-tool conditional implementationNew1
-
Document how to add EBS tmp disk to nodemanager configurationNew1
-
Document requirements for nodemanager token scopeNew1
-
[nodemanager] Only looking at first 100 queued jobsNew1
-
[CWL] Does not distinguish between keep references to File and Directory when selected in Workbench templateNew1
-
Migrate to Slurm APINew1
-
Allow templating of the collection sharing web pageNew1
-
Deprecate / remove arv-webNew1
-
Update Pipeline Optimization wiki with CWL/Crunchv2New1
-
crunch-run handling non-group readable files in output directoryNew1
-
mandatory keep_web configuration missing from workbench install instructionsNew1
-
Javascript SDKNew1
-
[SDKs] Improve wording of Keep error messages in Python SDKNew1
-
[node manager] failing testNew1
-
lost job logNew1
-
Be able to create a new collection based on a subdirectory in workbenchNew1
-
Find arvados-cwl-runner version easier in a container requestNew1
-
On the collections page indicate expiring collectionsNew1
-
[FUSE] high memory consumption (possible leak) in long-running arv-mountNew1
-
[Workbench] Update job stats to be more useful to end userNew1
-
[API] Remove async permissions codeNew10.50.5
-
User accounts optionally have read-only accessNew1
-
[Workbench] Add a "Browse" tab that links to tree/master in repository#Show pageNew1
-
[Go] CLI programs should exit 0 after giving -helpNew1
-
[Workbench] incorrect text about log messages on empty collectionNew1
-
Support schema.org/Google structured markup for datasetsNew1
-
[Workbench] The sort order of items on /pipeline_instances and /container_requests page is incorrectNew1
-
CWL Expression Tool Javascript issue when using str.includesNew1
-
Using cwl, when you obtain files (file objects) from a directory listing they lose some fields when compare to files listed in cwl docNew1
-
[Workbench] Provenance graph consolidates scatter stepsNew1
-
[Workbench] Logs containers with undefined exit codeNew1
-
[Crunch2] crunch-dispatch-slurm hits scancel too muchIn Progress2
-
[SDKs] Exceptions raised by Python SDK should include the "error token" if provided in the API responseNew1
-
[Workbench] Replace schizophrenic generic "groups" page with "roles" page that only creates/lists groups with group_class="role".New1
-
[node manager] not assigning weightsNew1
-
[Workbench] A cancelled container request page should show the "Re-run" buttonNew1
-
arv-put detects symlinks to common files and directories to avoid duplicated uploadsNew1
-
[API] [Workbench] config option serve_static_assets to serve_static_filesNew11.01.0
-
a-c-r should log the command used to run the pipelineNew1
-
[API] Delete old job/container logs in main server process, instead of rake tasks invoked from cron jobsNew1
-
[CWL] Allow "keep:" references on command line.New1
-
[Workbench] Improve user page group memberships management [to be groomed]New1
-
[CWL] [Workbench] Support for copying/moving pipelinesNew1
-
occasional API server badness: 'incomplete response received from application'New1
-
[Crunch2] Create workflow object for CWL runs which are initiated from the command lineNew1
-
[FUSE] Access shared/ is inefficientIn Progress2
-
[FUSE] Integration test using real programs with complex write patterns.New1
-
[API] Webhook callbacks for server-to-server communicationNew1
-
[FUSE] Writable fuse creating conflicts with itselfNew1
-
workbench needs to handle API server timeouts betterNew1
-
[API] Excessive memory and time consumed by API and dispatch when container fields (like "mounts") are largeNew1
-
[API] clean up stale/conflicting dns data from deleted node recordsNew1
-
Implement disk usage reporting for the administratorNew1
-
User activity page takes too long to loadNew1
-
"arv collection list" command parsing allows invalid linesNew1
-
HTTP 503 status for planned downtimeNew1
-
bcbio NA12878 validation runs: job re-use failure with non-existant collectionNew1
-
bcbio NA12878 validation runs: failed steps due to being unable to setup containerNew1
-
Support rendering of CWL description fields with embedded markupNew1
-
[SDK] avoid interfering with socket open/close - use pycurl sockoptfunction instead of opensocketfunctionNew1
-
[Workbench] UUIDs & PDHs should be hyperlinkedNew1
-
[SDK] tool for copying CWL file + input collectionsNew10.50.5
-
[arv-put] Lumpy / slow uploadNew1
-
Network saturationNew1
-
[Workbench] [UNC] Copying collections also copies metadataNew1
-
[arv-put] bad progress indicatorNew1
-
[CWL] Fails with $schemas referencing remote resources.New1
-
[API] full text search on pipeline_instances table is extremely slow (wrong index?)New1
-
[API] "arv group contents" produces a 404 error (seems to POST instead of GET?)New1
-
[Tests] Make workbench integration tests finish faster (at least in Jenkins)New1
-
job_task creation fails with ApiError - HttpError 422 - ActiveRecord::StatementInvalid: PG::InternalError: ERROR: invalid memory alloc request size 1718630765New1
-
Docker load time on compute node is too longNew1
-
[Nodemanager] Packaging for compute node setup scriptsNew1
-
[GA4GH] Participate in DREAM workflow interoperability activitiesIn Progress2
-
[GA4GH] Support task execution API using crunch v2 containersNew1
-
[GA4GH] Expose workflow records via tool registry APINew1
-
[GA4GH] Import from tool registry APINew1
-
[arv-put] When debug mode is active, report the cache file name being to be usedNew1
-
[Docs] Document keepstore S3 volume configurationNew1
-
[Docs] Migrate install docs from command line flags to YAML configs (keepproxy, keep-web)New1
-
[API] create_token script should allow operator to provide token scopes and opaque commentNew1
-
[Crunch2] Propagate dispatch error messages (e.g., sbatch fails) to user via logs/websocketNew1
-
Write scalability test which can be used periodically as neededNew1
-
[Crunch2] [Workbench] Show slurm queue position of containers submitted to slurm but not yet runningNew13.03.0
-
apt-get upgrade arvados-api-server on Ubuntu 12.04 did not update crunch-jobNew1
-
"arv keep_service create" should go to an editor.New1
-
Trying to copy a pipeline template to 9tee4 failsRejected6
-
"Run a example test" Button.New1
-
[SDKs] [Python] When reading data through Collection et al., signatures should refresh automatically when neededNew1
-
[WB] 'Used by' tab empty when no graph is availableNew1
-
[CWL] Avoid using "+" char in mount pathsNew10.50.5
-
arvados-cli gem dependency errorNew1
-
[Workbench] Live stats should use consistent coloring for graphsNew1
-
[keepstore] switch from goamz to a more actively maintained client libraryNew12.02.0
-
[Crunch2] [API] return a more specific 422 error message when a client calls containers#unlock without having the lockNew1
-
[Docs] [SDKs] Mention in API docs and discovery doc that destroy=delete and index=listNew1
-
[Spike] virtualenv arvados-cwl-runnerNew1
-
[Documentation] we should not use github.com copy of arvados in the tutorialNew1
-
[cwl] arvados-cwl-runner submitted job fails due to missing dependency futures>=3.0.5 in docker/jobs imageNew1
-
[API] [SDKs] When client and server versions differ, the server must either implement the API the client expects, or return an error.New1
-
[Workbench] Support array type input parameters to WorkflowsNew1
-
[Workbench] Don't create manifest with 0 length chunkNew1
-
[keepstore] Refactor volume Get/Put funcs to BlockReader/BlockWriter interfacesNew1
-
[Crunch2] Propagate error messages if sbatch command succeeds but crunch-run can't run (or can't log to the Arvados API)New1
-
[Workbench] pipeline_instance#show page should offer “Copy to project” and “Move pipeline instance” options like most other show pagesNew1
-
add a --user-script option to install-arvados-jobs-imageNew1
-
[Docs] Missing docker_image link classes from API docsNew10.50.5
-
[Workbench] "Public pipelines" on help menu links to wiki, not local public pipelinesNew1
-
Deprecate arv-runNew1
-
[Crunch2] crunch-run fails trying to set swappiness on ubuntu 1204 kernelNew1
-
Crunch1 jobs should still work on a slurm setup configured for Crunch2New1
-
[Node Manager] Doesn't kill itself when unhandled exceptions are raised during actor setupNew1
-
[Python SDK] Document undocumented methods in RichCollectionBaseNew10.50.5
-
Unable to build arvados-cwl-runner in 9tee4 environmentNew1
-
[CWL] a-c-r maximum recursion depth exceeded errorNew1
-
apps/workbench_functionals test failingNew1
-
services/nodemanager test_time_timout failingNew1
-
arvbox destroy fails because some files are owned by rootNew1
-
sometimes `arvbox reboot test` gets stuck asking for a sudo passwordNew1
-
Collection file count & size information don't get dynamically updated on collection updateNew1
-
arvados-git-httpd returns error '500' (Internal Server Error) when a request is not authorizedNew1
-
arvbox loops forever when something goes wrongNew1
-
implement approximate (estimated) counts for API list methodNew1
-
[Keep] Share buffers between overlapping/consecutive GET requests for the same blockNew12.02.0
-
test suite hangs (in arvbox) in sdk/python test_callbackNew1
-
Multiple links with the same relevant information can be createdNew1
-
[crunchstat-summary] HTML plots should be a superset of text format outputNew1
-
[crunch-job] use docker instead of docker.ioNew10.50.5
-
[Python SDK] Provide more control over pre-fetch behaviorNew1
-
Multiple virtual machines with the same hostname can be createdNew1
-
[SDKs] Fix memory leak in Python SDK Collection classNew1
-
[Performance][Workbench] While in a resource #show page, switching between tabs results in fetching the object again from API server. This can cause unacceptable amount of latency for large objects such as large pipeline instances and also to collections.New1
-
4xphq keep balance api request causes oom on api serverNew1
-
Node manager should fetch pricing information from cloud APIsNew1
-
[API] Remove unimplemented fields from api_client_authorizationNew1
-
[CWL] Reduce redundant work with subworkflow RunInSingleContainerNew1
-
Request collections that don't (yet) exist via fuse interfaceNew1
-
Faster downloading using arv-getNew1
-
In the arvados sso database, multiple identical clients can be createdNew1
-
Add varchar_pattern_ops to all relevant PostgreSQL UUID indexesNew1
-
[Workbench] Enable refresh for "small" pipelinesNew1
-
[Workbench] Import CWL workflowNew1
-
remove the need of yum reinstall from the installation/upgrade of Rails based componentsNew1
-
arvados-cwl-runner fails to find secondaryFilesNew1
-
[Workbench] Don't assume Switchyard config for SSH explanationNew1
-
[Workbench] list of logins in the admin page isn't showing all loginsNew1
-
[CWL] a-c-r option to resubmit failed jobsNew1
-
[Workbench] add a configuration flag to hide compute nodesNew1
-
Output glob "./" doesn't work as output from CWL workflowNew1
-
[Centos7] [google_api_python_client] packaging with wrong permissionsNew1
-
[API] [Workbench] Error out when unrecognized keys appear in config filesNew10.50.5
-
[Workbench] Pipeline instance shows wrong button labels in tab areaNew1
-
[CWL] Tries to run docker inside container where docker is not available, gives IOErrorNew1
-
[SDK] Convenience method for resolving project/file pathsNew1
-
[Performance][Workbench] Computing user notifications in topnav is expensive. Can the user's properties be used instead?New1
-
[Performance] Fetching the pipeline instance qr1hi-d1hrv-jl9fvzy3x8sdj8v seems to take too longNew1
-
[Crunch1] Log the node properties at the start of a jobNew1
-
Efficient queries for notification menu itemsNew1
-
[CWL] arvados-cwl-runner may not be handling input files on keep mount correctlyNew1
-
Arvados should be able to cat/zcat files in collections easilyNew1
-
[Node Manager] Support ephemeral additional storage for Azure node types that do not have sufficient instance storageNew1
-
Provide more reasonable error messages for memory issues during container dispatchNew1
-
Confusing job duration reportingNew1
-
[SSO] sso server adds multiple records without checkingNew1
-
[Workbench] Jobs on dashboard say "No output" even when they have outputNew1
-
Additional Crunch job logging controlsNew1
-
Automate starting/enabling services during Workbench and API package installationNew1
-
[API] In each request log entry, report time spent getting current permission graphNew1
-
[Crunch] crunch-dispatch log throttling should not apply to its own stderrNew1
-
Python RichCollectionbase's find_or_create() method callers may assume that found object is of "create_type" typeNew1
-
RichCollectionBase's _get_src_target method would crash if "source" argument is not basestring and "target_path" is empty.New1
-
keep-balance reporting large numbers of replicas lostNew1
-
queued jobs in Paused pipeline instances start running anywayNew1
-
pipeline_instance state can be changed from `Complete` to `Paused`New1
-
[Workbench] ContainerRequest#show crashes "undefined method `each' for nil:NilClass"New1
-
Move Container related documentation from wiki to codeNew1
-
[Workbench] Double-clicking "show version" link causes modal deadlockNew1
-
[Workbench] Retrieve all log content directly from API instead of pre-rendering in RailsNew1
-
[SDKs] Python SDK should use a more recent version of the google api client libraryNew1
-
[Testing] TestErrorDuringRsync_FakeDstKeepserversNew1
-
[Crunch2] [API] Permit container [request] with empty command (run default docker command)In Progress2
-
[Crunch2] [API] Support container request expiry (expires_at)New1
-
[CWL][Crunch][Crunch2] crunchrunner should ignore hidden directories when uploading to keepNew1
-
[CWL][Crunch2][Crunch] crunchrunner should use CWL globs to output data to keepNew1
-
[FUSE] arv-mount installation documentation not workingNew1
-
[FUSE] performance issues stat() in pythonNew1
-
[FUSE] Undelete collections by moving them out of the TrashDirectoryNew1
-
[keep-balance] Refuse to act when planning to delete data above an admin-specified thresholdNew1
-
[keep-balance] Do not delete blocks referenced by collections with replication_desired=0New1
-
login-sync config file & systemd unitNew1
-
nodemanager systemd unitNew1
-
[Workbench] file upload should provide progress bar for overall upload, not just individual filesNew1
-
Workbench file upload should allow the selection of directoriesNew1
-
[SDK] portable_manifest_text() normalizes manifest, breaks CollectionReader() round tripNew1
-
[SDKs] Python SDK duplicates resource attributes in top level of paramsNew1
-
[SDKs] arv-put's default output includes both collection UUID and PDHNew1
-
[SDKs] Improve metadata created by arv-putNew1
-
[Workbench UI] Pipeline instances should have a link to view the CWL file used.New1
-
[CWL] Creating intermediate folders in working directory (fails in cwl-runner)New1
-
[Workbench] UI should advance to new step when user submits their inputNew1
-
[CWL] Secondary files entering into Arvados automaticallyNew1
-
[Crunch2][Workbench] List both pipeline_templates and workflows on both pagesNew12.02.0
-
[Workbench] Ability to add group from Groups admin pageNew1
-
[keep-rsync] Rename "replications" to "replicas"New10.50.5
-
[keep-balance] "Expedited delete" tool: perform garbage collection on some specific (recently deleted) collections, bypassing usual GC race protectionsNew13.03.0
-
[CWL] arvados-cwl-runner should reuse the most recent runNew1
-
[CWL] Jobs crash when arvados/jobs:latest is not suitable to run CWL jobsNew1
-
[Crunch2] crunch-dispatch-slurm can't successfully dispatch work when run from a directory it can't write toNew10.50.5
-
[Crunch2] Document/fix handling of collections with non-nil expires_at fieldIn Progress21.01.0
-
[Data manager] Verbose reportingIn Progress20.50.5
-
[Node Manager] huge virtual memory sizeNew1
-
[Workbench] Times out before API server loading active pipeline instancesFeedback40.50.5
-
[FUSE] rmdir on CollectionDirectory sets expires_atNew1
-
[FUSE] Trash directory to list, inspect, and un-trash trashed collectionsNew1
-
[FUSE] Don't display expiring collections in regular collection listingsNew1
-
[FUSE] Make .arvados#collection available in collection subdirectoriesNew1
-
[FUSE] .arvados#collection is missing or outdated after writing inside collectionNew1
-
add key/value support for tagsNew1
-
[Provenance Tracking] jobs refer to collections by uuids, not pdhNew1
-
Add Gantt chart for pipeline optimizationNew1
-
get rid of dependencies python-pyasn1 python-pyasn1-modulesNew1
-
[FUSE] arv-mount is too slow for strelkaNew1
-
[Documentation] Write a Crunch2 wiki pageNew11.01.0
-
[Documentation] Write a Crunch wiki pageNew11.01.0
-
[Crunchv2] python thread error after job successNew1
-
[SDKs] PySDK fails to load CAs for SSL verification when run inside CondaNew1
-
[Crunch] crunch-job can miss the final log output of a jobNew1
-
[FUSE] When we give up trying to write a block, the next operation on the file should failNew1
-
[Crunch] Limit maximum wait time between retriesNew1
-
[Crunch] [UX] Standard excepthook to help debug job problemsNew11.01.0
-
[SDKs] arv-copy fails to copy a Docker image specified with repo:tag syntaxNew10.50.5
-
[Workbench] The "Log" tab should have an notification that the job has been queuedNew1
-
[Node Manager] Less logging of tracebacks for routine exceptionsNew1
-
[API] Bad compute node address detection on private networksNew1
-
[SDKs] WebSocketClient Exception 'NoneType' object is not callableIn Progress20.50.5
-
[Crunch] Log throttling shouldn't throttle logs from crunchstat, crunch-jobNew1
-
[FUSE] Add --umask, --fmask, --dmask options to control file permissionsNew11.01.0
-
[SDKs] Bad use of RetryLoop in events.pyNew1
-
[SDK] arvados.arvfile.readall_decompressed() does not return all blocks on a fileNew1
-
[Crunch] Job was repeatedly retried on same bad compute node until abandonedNew1
-
[Docs] Many tutorial instructions are wrong outside Curoverse clustersNew1
-
[Workbench] No user profile should be required in the default configurationNew10.50.5
-
[Docs] Document Git 1.7.10+ dependency for shell node and HTTPS Git cloningNew1
-
[Docs/Workbench] Document how to clone repositories over HTTPSNew1
-
[Docs/Workbench] Improve SSH agent documentationNew1
-
[Workbench] Hide file preview buttons when preview isn't possible with current keep-web configNew11.01.0
-
[PySDK] API client logs a warning when you create an object without an owner_uuidNew1
-
[Node Manager] Broken nodes always get shut down, exempt from all node-counting considerationsNew1
-
[NodeManager] Use sys.exc_clear() to release exception tracebacksNew1
-
[Node Manager] Minimum idle time before node is eligible for shutdownNew1
-
[Node Manager] qr1hi nodemanager can't start if ulimit is in placeNew1
-
[API] Go code to connect to the API server database and make basic sense of itNew1
-
[API] Go code to implement the Arvados API permissions modelNew1
-
[API] List queries using "distinct" option return incorrect number of items_availableNew1
-
[API] Should not be necessary to host git repos on the same host as API serverNew12.02.0
-
[FUSE] arv-mount should detect and log any files/dirs that are still open after unmountingNew1
-
[FUSE] Reset mount-tmp to the state of another collectionNew1
-
[SDKs] Update run-command to use arv-mount --mount-tmp instead of staging directoryNew1
-
[API] Job model validates that the script exists in the repository at script_versionNew11.01.0
-
[SDKs] Port arv-keepdocker to use the docker-py libraryNew1
-
[SDKs] `arv keep docker` can upload an image already saved as .tarNew1
-
[SDKs] `arv keep docker` can make links for an image already in a collectionNew1
-
[SDKs] Clients can specify which auth config file to load.New10.50.5
-
[SDKs] PySDK one_task_per_input_file should support a num_retries argumentNew1
-
[SDKs] arv CLI program accepts "-" and "/path/to/file" as values for parameters that expect JSON (most notably the "body" parameter)