-
[controller] Verify hash on manifest text when querying by PDHResolved30.50.5
-
[WebDAV] Can't delete the last file in a collectionIn Progress2
-
[API] Accept "shared with me" flag in groups#contentsNew11.01.0
-
crunchstat-summary --container-request does not report on keep i/oIn Progress2
-
GA4GH WES action items from TorontoIn Progress21.01.0
-
Federated record retrievalResolved31.01.0
-
[crunch2] crunchstat-summary doesn't report elapsed time for crunch2 jobsIn Progress2
-
crunchstat-summary Error parsing valueIn Progress2
-
crunch-dispatch-cloud spikeIn Progress21.01.0
-
[API] issues v2 format auth tokensNew11.01.0
-
[controller] Federated container requestsIn Progress22.02.0
-
[Controller] Federated multi object retrievalNew13.03.0
-
[API] Store, and add APIs to retrieve, previous versions of collection objectsIn Progress24.04.0
-
[Crunch2] [Crunch1] Disable crunch1 APIs by default on new installsResolved30.50.5
-
Crunch job output logging improvement storiesIn Progress22.02.0
-
[API] can delegate permissions to remote container requestsNew1
-
[controller] Convert +R to +A in collection POST and PUT operationsNew1
-
[CWL] run steps on remote clustersNew1
-
Extend vocabulary support for properties to support strong identifiers and multiple labelsNew1
-
[keep-web] [Documentation] Increase client_max_body_size for WebDAV requestsNew1
-
[CWL] Use streamable flag as a hint to use keep outputNew1
-
[crunch-dispatch-slurm] option to set job priority directly instead of using nice valuesNew1
-
[CWL] arvados-cwl-runner should support tagging container requests using propertiesNew1
-
[API] Container request can provide existing collection UUID that will accept CR outputNew1
-
arv-put does not check cached signatures when resumingNew1
-
[Controller] Keep database in tuneNew1
-
[Spike] [Controller] Port "update workflow" API to controllerNew1
-
[keepstore] Cached block fetch for federationNew1
-
[Controller] Port "collection update" API from RailsNew1
-
[API] [Controller] Move API configs from Rails config file to cluster config fileNew1
-
[Controller] Port "collection update" functional tests from Rails API to controller test suiteNew1
-
crunch-dispatch-slurm does not warn when slurm MaxJobCount reachedNew1
-
crunch-dispatch-slurm / Go SDK Dispatcher not able to "let go" of deleted containersNew1
-
Make keep-web documentation available on doc.arvados.orgNew1
-
Listing collections by PDH and name can be very slowNew1
-
[API server] Implement request throttlingNew1
-
[keepstore] Move legacy metrics to prometheus /metrics endpointNew1
-
Default keep cache scales with machine sizeNew1
-
Discovery document inconsistenciesNew1
-
Crunchstat-summary graphs tmpdir usageNew1
-
Document strategies on how to use existing resources to save user preferencesNew1
-
Support browsing of projects shared with me in WebDAVNew1
-
Add metrics endpoint to API serverNew1
-
Support collection versionsNew1
-
[CLI] arv traceback on simple timeoutNew1
-
[Node manager] shutting down nodes when there is a wishlist for same size nodesNew1
-
Build Docker images without requiring Docker on clientNew1
-
Replace SLURM for cloud job scheduling/dispatchingNew1
-
[API] groups#contents response should obey caller-provided order (not sort on type first)New1
-
[keep-web] (webdav) Support COPY and MOVE between collectionsNew1
-
[Workbench] Search users by email address and shell accountNew1
-
Provide more information to SLURM to make scheduling decisions on HPCNew1
-
[CWL] Developer docs for arvados-cwl-runnerNew1
-
Ability to merge a local account into a remote (federated) accountNew1
-
[STORAGE-CLASES] Report the storage classes used by a pipelineNew1
-
crunch-run takes a very long time for CWL steps with large numbers of File inputs - could use a new kind of mounts entry to address thisNew1
-
[Documentation] Higher Level Python SDK Reference PageNew1
-
Python SDK must have docstrings for all public interfacesNew1
-
[Python SDK] Retry on HTTP 5xx errorsNew1
-
[arv-mount] avoid excessive memory consumption of idle arv-mountsNew1
-
[API] Sequence of "create group" requests runs slowly, and can crash API serverNew1
-
[cwl] a-c-r should log useful information on failure even with --quietNew1
-
No timeout is specified in A.C.R or as a default in the python sdkNew1
-
[Workbench] View/copy/expunge previous versions of a collectionNew1
-
Fix postgres search for filenamesNew1
-
Document API in API discovery documentNew1
-
[Workbench] Self serve account mergeNew1
-
[Epic] Easy cluster installNew1
-
[Epic] Zero-downtime upgradeNew1
-
[API] Add "authorizations" tableNew1
-
--ignore-docker-for-reuse not passed to crunch v2 jobs started via --submit --no-waitNew1
-
As a data provider, I would like the ability to provide metered access to my data on Arvados, including start/end dates, bandwidth caps, and % of file accessedNew1
-
As a CWL learner, I would like to be able to run CWL workflows easily on cloud.curoverse.comNew1
-
[keep-web] read/write support for /by_id and /usersNew1
-
Support Bitbucket git repo access from ComposerNew1
-
arvados-cwl-runner supports Python 3New1
-
[WebDAV] Cleanup writable WebDAV loose endsNew1
-
[keepstore] Limit entire process to configured amount or % of system memory (replace -max-buffers=X)New1
-
[SDKs] Remove arvadosclient and keepclient librariesNew1
-
[SDKs] Wean all components off old arvadosclient and keepclient librariesNew1
-
containers are not reused unless runtime constraints (including RAM) match exactlyNew1
-
Fix misleading crunch file upload messagesNew1
-
[SDK] Reduce collection class memory footprintNew1
-
[Crunch2] All stdout gets the same timestamp and other logging problemsNew1
-
[Workbench] Ensure that running processes are visible on the dashboardNew1
-
[Workbench] page with a view of all the top level container requestsNew1
-
[Federation] Workbench login chooserNew1
-
[keep] Investigate using signed URLs to delegate access to cloud bucketsNew1
-
[crunchstat-summary] broken option for skip child jobs?New1
-
[Node Manager] Behave smarter in environments where scratch space can be arbitrarily sized, like GCP and AWSNew1
-
[API] fix race between arrival of trash time and next sweepNew1
-
install docs for keepproxy are out of dateNew1
-
[keep-web] Accept /t=token/c=collection/path (currently only /c=collection/t=token/path)New1
-
arv-mount by_tag directory support for propertiesNew1
-
Status endpoint aggregatorNew1
-
Activating an account (setting is_active from false to true) does not email the new userNew1
-
[Python SDK] Implement support for universal newline mode in Collections APINew1
-
Standard convention for Nagios-compatible health check scripts kept alongside source for servicesNew1
-
Pull Docker images without requiring Docker on clientNew1
-
[CWL] Resolve uuid or symbolic names to pdhNew1
-
[SDKs] support text-mode open() in Python 3New1
-
[Deployment] Use consul to report health of services/componentsIn Progress2
-
[API] [arvados-ws] remove all websockets and puma related code from the api server codebaseNew1
-
Integrate CI::Reporter to provide Ruby test output in JUnit XML formatNew1
-
[API?/Workbench] Search for a link tag value returns linked objectsNew1
-
[Node Manager] Aggressively throttles node creation requests when the cloud region is fullNew1
-
Copying a project with a docker image doesn't copy the docker metadataNew1
-
[SDKs] Use sphinx to render for Python SDK docsNew1
71
Arvados Future Sprints
2020-01-02
2020-01-01
A pseudo-version to collect tickets from multiple projects
-
[crunch-run] Cancel container on FUSE errorNew12.02.0
-
[keep-web] Serve previous collection versionsNew10.50.5
-
a-n-m spawned a container on the wrong sized nodeNew1
-
[nodemanager] Be quicker applying fixup for node featuresIn Progress2
-
Workbench takes new users to inexistant tutorialNew1
-
Package Arvados for Ubuntu Bionic Beaver 18.04 LTSIn Progress2
-
Refactor crunch2 loggingNew12.02.0
-
[API] Strict checks for "@@" filter operandNew11.01.0
-
Document web socket server API (v0)New11.01.0
-
Design new nodemanager config data organization for cluster-wide configNew10.50.5
-
Nodemanager reads instance sizes from the system config file to avoid duplicationNew12.02.0
-
[API] If enabled by user via "preferences" checkbox in Workbench, notification service sends email to owner when a workflow finishes, fails, or is failingNew12.02.0
-
Review dependencies to make sure that they meet requirementsNew1
-
[Crunch2] [API] Specify which user's credentials should be used by a containerNew1
-
[Keep] Support multiple storage classesIn Progress2
-
[Workbench] Support display & reseting of expiration dates for collectionsNew12.02.0
-
[keepstore] Write new blocks to appropriate storage classNew11.01.0
-
Benchmark container_request creation and see if there are opportunities for optimizationIn Progress2
-
[API] Support multiple load-balanced API server nodesNew11.01.0
-
arvbox warn if running as root or on OS XIn Progress2
-
keepstore -help entry for -dump-config is unclearNew1
-
[keepproxy] document limiting maximum number of HTTP connectionsNew10.50.5
-
Support SLURM parameter passthrough from CWL jobsNew12.02.0
-
is_a filter doesn't work with remote objectsNew11.01.0
-
[CWL] arvados-cwl-runner should support tagging output collection using propertiesIn Progress21.01.0
-
crunch-dispatch-slurm uses a surprising number of file descriptors, and stops dispatching when it gets a "too many open files" errorNew1
-
Investigate packrat to lock down R package dependenciesNew1
-
R SDK submit to BioconductorNew1
-
Provide configuration knob to disallow external access through keep-proxyIn Progress2
-
Can't create user group with the same name as a top level projectNew1
-
[FUSE] Access shared/ is inefficientIn Progress2
-
[Composer] Production build fails to loadNew1
-
keepstore no longer functioning with repeated errors: http: Accept error: accept tcp [::]:25107: accept4: too many open files; retrying in 1sIn Progress2
-
[Crunch2] Node record's crunch_worker_state field is not populatedNew1
-
[Workbench] Bad dashboard time formatting - 60m == 1hNew1
-
[API] Don't create an index if it exists already. Will break install if we manually added it,New1
-
[crunchv2] Improve crunch-run environment reportingNew1
-
[API] Associate multiple identity_url from SSO with same userNew1
-
Collections/data access APINew1
-
arv-get should abort on ctrl/CIn Progress2
-
[Composer] Refactor to separate vendor-specific pieces and all them to be replacedIn Progress2
-
[Workbench] Description column doesn't contain descriptionsNew11.01.0
-
[cwl] cwl-tool conditional implementationNew1
-
Document how to add EBS tmp disk to nodemanager configurationNew1
-
Document requirements for nodemanager token scopeNew1
-
[nodemanager] Only looking at first 100 queued jobsNew1
-
[CWL] Does not distinguish between keep references to File and Directory when selected in Workbench templateNew1
-
Migrate to Slurm APINew1
-
Allow templating of the collection sharing web pageNew1
-
Deprecate / remove arv-webNew1
-
Update Pipeline Optimization wiki with CWL/Crunchv2New1
-
crunch-run handling non-group readable files in output directoryNew1
-
mandatory keep_web configuration missing from workbench install instructionsNew1
-
Javascript SDKNew1
-
[SDKs] Improve wording of Keep error messages in Python SDKNew1
-
[node manager] failing testNew1
-
lost job logNew1
-
Be able to create a new collection based on a subdirectory in workbenchNew1
-
[crunchstat-summary] gives invalid min_cores recommendationNew1
-
Find arvados-cwl-runner version easier in a container requestNew1
-
On the collections page indicate expiring collectionsNew1
-
[FUSE] high memory consumption (possible leak) in long-running arv-mountNew1
-
[Workbench] Update job stats to be more useful to end userNew1
-
[API] Remove async permissions codeNew10.50.5
-
User accounts optionally have read-only accessNew1
-
[Workbench] Add a "Browse" tab that links to tree/master in repository#Show pageNew1
-
[Go] CLI programs should exit 0 after giving -helpNew1
-
[Workbench] incorrect text about log messages on empty collectionNew1
-
Support schema.org/Google structured markup for datasetsNew1
-
[Workbench] The sort order of items on /pipeline_instances and /container_requests page is incorrectNew1
-
CWL Expression Tool Javascript issue when using str.includesNew1
-
Using cwl, when you obtain files (file objects) from a directory listing they lose some fields when compare to files listed in cwl docNew1
-
[Workbench] Provenance graph consolidates scatter stepsNew1
-
[Workbench] Logs containers with undefined exit codeNew1
-
[Crunch2] crunch-dispatch-slurm hits scancel too muchIn Progress2
-
[SDKs] Exceptions raised by Python SDK should include the "error token" if provided in the API responseNew1
-
[Workbench] Replace schizophrenic generic "groups" page with "roles" page that only creates/lists groups with group_class="role".New1
-
[node manager] not assigning weightsNew1
-
Example CWL code for cwl-runner doesn't workResolved3
-
[Workbench] A cancelled container request page should show the "Re-run" buttonNew1
-
arv-put detects symlinks to common files and directories to avoid duplicated uploadsNew1
-
[API] [Workbench] config option serve_static_assets to serve_static_filesNew11.01.0
-
a-c-r should log the command used to run the pipelineNew1
-
[API] Delete old job/container logs in main server process, instead of rake tasks invoked from cron jobsNew1
-
[CWL] Allow "keep:" references on command line.New1
-
[API] Limit number of lock/unlock cycles for a given containerNew1
-
[Workbench] Improve user page group memberships management [to be groomed]New1
-
[CWL] [Workbench] Support for copying/moving pipelinesNew1
-
occasional API server badness: 'incomplete response received from application'New1
-
[Crunch2] Create workflow object for CWL runs which are initiated from the command lineNew1
-
[FUSE] Integration test using real programs with complex write patterns.New1
-
[API] Webhook callbacks for server-to-server communicationNew1
-
[FUSE] Writable fuse creating conflicts with itselfNew1
-
workbench needs to handle API server timeouts betterNew1
-
[API] Excessive memory and time consumed by API and dispatch when container fields (like "mounts") are largeNew1
-
[API] clean up stale/conflicting dns data from deleted node recordsNew1
-
Implement disk usage reporting for the administratorNew1
-
User activity page takes too long to loadNew1
-
"arv collection list" command parsing allows invalid linesNew1
-
HTTP 503 status for planned downtimeNew1
-
bcbio NA12878 validation runs: job re-use failure with non-existant collectionNew1
-
bcbio NA12878 validation runs: failed steps due to being unable to setup containerNew1
-
Support rendering of CWL description fields with embedded markupNew1
-
[SDK] avoid interfering with socket open/close - use pycurl sockoptfunction instead of opensocketfunctionNew1
-
[Workbench] UUIDs & PDHs should be hyperlinkedNew1
-
[SDK] tool for copying CWL file + input collectionsNew10.50.5
-
[arv-put] Lumpy / slow uploadNew1
-
Network saturationNew1
-
[Workbench] [UNC] Copying collections also copies metadataNew1
-
[arv-put] bad progress indicatorNew1
-
[CWL] Fails with $schemas referencing remote resources.New1
-
[API] full text search on pipeline_instances table is extremely slow (wrong index?)New1
-
[API] "arv group contents" produces a 404 error (seems to POST instead of GET?)New1
-
[Tests] Make workbench integration tests finish faster (at least in Jenkins)New1
-
job_task creation fails with ApiError - HttpError 422 - ActiveRecord::StatementInvalid: PG::InternalError: ERROR: invalid memory alloc request size 1718630765New1
-
Docker load time on compute node is too longNew1
-
[Nodemanager] Packaging for compute node setup scriptsNew1
-
[GA4GH] Participate in DREAM workflow interoperability activitiesIn Progress2
-
[GA4GH] Support task execution API using crunch v2 containersNew1
-
[GA4GH] Expose workflow records via tool registry APINew1
-
[GA4GH] Import from tool registry APINew1
-
[arv-put] When debug mode is active, report the cache file name being to be usedNew1
-
[Docs] Document keepstore S3 volume configurationNew1
-
[Docs] Migrate install docs from command line flags to YAML configs (keepproxy, keep-web)New1
-
[API] create_token script should allow operator to provide token scopes and opaque commentNew1
-
[Crunch2] Propagate dispatch error messages (e.g., sbatch fails) to user via logs/websocketNew1
-
Write scalability test which can be used periodically as neededNew1
-
[Crunch2] [Workbench] Show slurm queue position of containers submitted to slurm but not yet runningNew13.03.0
-
apt-get upgrade arvados-api-server on Ubuntu 12.04 did not update crunch-jobNew1
-
"arv keep_service create" should go to an editor.New1
-
Trying to copy a pipeline template to 9tee4 failsNew1
-
"Run a example test" Button.New1
-
[SDKs] [Python] When reading data through Collection et al., signatures should refresh automatically when neededNew1
-
Document how to choose a suitable blob signature TTLNew1
-
[WB] 'Used by' tab empty when no graph is availableNew1
-
[keep-web] configurable block cache sizeNew10.50.5
-
[CWL] Avoid using "+" char in mount pathsNew10.50.5
-
arvados-cli gem dependency errorNew1
-
[Workbench] Live stats should use consistent coloring for graphsNew1
-
[keepstore] switch from goamz to a more actively maintained client libraryNew12.02.0
-
[Crunch2] [API] return a more specific 422 error message when a client calls containers#unlock without having the lockNew1
-
[Docs] [SDKs] Mention in API docs and discovery doc that destroy=delete and index=listNew1
-
[Spike] virtualenv arvados-cwl-runnerNew1
-
[Documentation] we should not use github.com copy of arvados in the tutorialNew1
-
[cwl] arvados-cwl-runner submitted job fails due to missing dependency futures>=3.0.5 in docker/jobs imageNew1
-
[API] [SDKs] When client and server versions differ, the server must either implement the API the client expects, or return an error.New1
-
[Workbench] Support array type input parameters to WorkflowsNew1
-
[Workbench] Don't create manifest with 0 length chunkNew1
-
[keepstore] Refactor volume Get/Put funcs to BlockReader/BlockWriter interfacesNew1
-
[Crunch2] Propagate error messages if sbatch command succeeds but crunch-run can't run (or can't log to the Arvados API)New1
-
[Workbench] pipeline_instance#show page should offer “Copy to project” and “Move pipeline instance” options like most other show pagesNew1
-
add a --user-script option to install-arvados-jobs-imageNew1
-
[Docs] Missing docker_image link classes from API docsNew10.50.5
-
[Workbench] "Public pipelines" on help menu links to wiki, not local public pipelinesNew1
-
Deprecate arv-runNew1
-
[Crunch2] crunch-run fails trying to set swappiness on ubuntu 1204 kernelNew1
-
Crunch1 jobs should still work on a slurm setup configured for Crunch2New1
-
[Node Manager] Doesn't kill itself when unhandled exceptions are raised during actor setupNew1
-
[Python SDK] Document undocumented methods in RichCollectionBaseNew10.50.5
-
Unable to build arvados-cwl-runner in 9tee4 environmentNew1
-
[CWL] a-c-r maximum recursion depth exceeded errorNew1
-
apps/workbench_functionals test failingNew1
-
services/nodemanager test_time_timout failingNew1
-
[crunchstat-summary] should not report 0% CPU and 0 RAM in cases where stats were not reported at allNew1
-
arvbox destroy fails because some files are owned by rootNew1
-
sometimes `arvbox reboot test` gets stuck asking for a sudo passwordNew1
-
Collection file count & size information don't get dynamically updated on collection updateNew1
-
arvados-git-httpd returns error '500' (Internal Server Error) when a request is not authorizedNew1
-
arvbox loops forever when something goes wrongNew1
-
implement approximate (estimated) counts for API list methodNew1
-
[Keep] Share buffers between overlapping/consecutive GET requests for the same blockNew12.02.0
-
test suite hangs (in arvbox) in sdk/python test_callbackNew1
-
Multiple links with the same relevant information can be createdNew1
-
[crunchstat-summary] HTML plots should be a superset of text format outputNew1
-
[crunch-job] use docker instead of docker.ioNew10.50.5
-
[Python SDK] Provide more control over pre-fetch behaviorNew1
-
Multiple virtual machines with the same hostname can be createdNew1
-
Document crunchstat-summaryNew1
-
[SDKs] Fix memory leak in Python SDK Collection classNew1
-
[Performance][Workbench] While in a resource #show page, switching between tabs results in fetching the object again from API server. This can cause unacceptable amount of latency for large objects such as large pipeline instances and also to collections.New1
-
4xphq keep balance api request causes oom on api serverNew1
-
Node manager should fetch pricing information from cloud APIsNew1
-
[API] Remove unimplemented fields from api_client_authorizationNew1
-
[CWL] Reduce redundant work with subworkflow RunInSingleContainerNew1
-
crunchstat-summary should explain why "(no report generated)" when possibleNew1
-
Request collections that don't (yet) exist via fuse interfaceNew1
-
Faster downloading using arv-getNew1
-
In the arvados sso database, multiple identical clients can be createdNew1
-
Add varchar_pattern_ops to all relevant PostgreSQL UUID indexesNew1
-
Get list of Arvados configuration parameters in puppet that could be published by ConsulNew1
-
[Workbench] Enable refresh for "small" pipelinesNew1
-
[Workbench] Import CWL workflowNew1
-
remove the need of yum reinstall from the installation/upgrade of Rails based componentsNew1
-
arvados-cwl-runner fails to find secondaryFilesNew1
-
[Workbench] Don't assume Switchyard config for SSH explanationNew1
-
[Workbench] list of logins in the admin page isn't showing all loginsNew1
-
[CWL] a-c-r option to resubmit failed jobsNew1
-
[Crunch2] crunch-run config option to use arv-mount for output dirResolved3
-
[Workbench] add a configuration flag to hide compute nodesNew1
-
Output glob "./" doesn't work as output from CWL workflowNew1
-
[Crunch2] [API] Accept collection UUID or PDH as container_image in a container requestNew1
-
[Centos7] [google_api_python_client] packaging with wrong permissionsNew1
-
[API] [Workbench] Error out when unrecognized keys appear in config filesNew10.50.5
-
[Go programs] Error out when unrecognized keys appear in config filesNew1
-
[Workbench] Pipeline instance shows wrong button labels in tab areaNew1
-
[CWL] Tries to run docker inside container where docker is not available, gives IOErrorNew1
-
[SDK] Convenience method for resolving project/file pathsNew1
-
[Performance][Workbench] Computing user notifications in topnav is expensive. Can the user's properties be used instead?New1
-
[Performance] Fetching the pipeline instance qr1hi-d1hrv-jl9fvzy3x8sdj8v seems to take too longNew1
-
[Crunch1] Log the node properties at the start of a jobNew1
-
Efficient queries for notification menu itemsNew1
-
[CWL] arvados-cwl-runner may not be handling input files on keep mount correctlyNew1
-
Arvados should be able to cat/zcat files in collections easilyNew1
-
[Node Manager] Support ephemeral additional storage for Azure node types that do not have sufficient instance storageNew1
-
Provide more reasonable error messages for memory issues during container dispatchNew1
-
Confusing job duration reportingNew1
-
[SSO] sso server adds multiple records without checkingNew1
-
[Workbench] Jobs on dashboard say "No output" even when they have outputNew1
-
Additional Crunch job logging controlsNew1
-
Automate starting/enabling services during Workbench and API package installationNew1
-
[Packaging] Include sample config file (/etc/arvados/foo/foo.example.yml) with each configurable packageNew12.02.0
-
[API] In each request log entry, report time spent getting current permission graphNew1
-
[Crunch] crunch-dispatch log throttling should not apply to its own stderrNew1
-
Python RichCollectionbase's find_or_create() method callers may assume that found object is of "create_type" typeNew1
-
RichCollectionBase's _get_src_target method would crash if "source" argument is not basestring and "target_path" is empty.New1
-
keep-balance reporting large numbers of replicas lostNew1
-
queued jobs in Paused pipeline instances start running anywayNew1
-
pipeline_instance state can be changed from `Complete` to `Paused`New1
-
[Workbench] ContainerRequest#show crashes "undefined method `each' for nil:NilClass"New1
-
Move Container related documentation from wiki to codeNew1
-
[Workbench] Double-clicking "show version" link causes modal deadlockNew1
-
[Workbench] Retrieve all log content directly from API instead of pre-rendering in RailsNew1
-
[SDKs] Python SDK should use a more recent version of the google api client libraryNew1
-
[Testing] TestErrorDuringRsync_FakeDstKeepserversNew1
-
[Testing] test_shutdown_declined_when_idle_and_job_queued flakyClosed5
-
[Crunch2] [API] Permit container [request] with empty command (run default docker command)In Progress2
-
[Crunch2] [API] Support container request expiry (expires_at)New1
-
[CWL][Crunch][Crunch2] crunchrunner should ignore hidden directories when uploading to keepNew1
-
[CWL][Crunch2][Crunch] crunchrunner should use CWL globs to output data to keepNew1
-
[FUSE] arv-mount installation documentation not workingNew1
-
[FUSE] performance issues stat() in pythonNew1
-
[FUSE] Undelete collections by moving them out of the TrashDirectoryNew1
-
[keep-balance] Refuse to act when planning to delete data above an admin-specified thresholdNew1
-
[keep-balance] Do not delete blocks referenced by collections with replication_desired=0New1
-
login-sync config file & systemd unitNew1
-
nodemanager systemd unitNew1
-
[SDK] Package Python apps as virtualenvsNew1
-
[Workbench] file upload should provide progress bar for overall upload, not just individual filesNew1
-
Workbench file upload should allow the selection of directoriesNew1
-
[SDK] portable_manifest_text() normalizes manifest, breaks CollectionReader() round tripNew1
-
[SDKs] Python SDK duplicates resource attributes in top level of paramsNew1
-
[SDKs] arv-put's default output includes both collection UUID and PDHNew1
-
[SDKs] Improve metadata created by arv-putNew1
-
[Workbench UI] Pipeline instances should have a link to view the CWL file used.New1
-
[CWL] Creating intermediate folders in working directory (fails in cwl-runner)New1
-
[Workbench] UI should advance to new step when user submits their inputNew1
-
[CWL] Secondary files entering into Arvados automaticallyNew1
-
[Crunch2][Workbench] List both pipeline_templates and workflows on both pagesNew12.02.0
-
[CWL] cwl-runner parses nested arrays repetivelyResolved3
-
[Workbench] Ability to add group from Groups admin pageNew1
-
[keep-rsync] Rename "replications" to "replicas"New10.50.5
-
[keep-balance] "Expedited delete" tool: perform garbage collection on some specific (recently deleted) collections, bypassing usual GC race protectionsNew13.03.0
-
[CWL] arvados-cwl-runner should reuse the most recent runNew1
-
[CWL] Jobs crash when arvados/jobs:latest is not suitable to run CWL jobsNew1
-
[Crunch2] crunch-dispatch-slurm can't successfully dispatch work when run from a directory it can't write toNew10.50.5
-
[Crunch2] Document/fix handling of collections with non-nil expires_at fieldIn Progress21.01.0
-
[Data manager] Verbose reportingIn Progress20.50.5
-
[Node Manager] huge virtual memory sizeNew1
-
[Workbench] Times out before API server loading active pipeline instancesFeedback40.50.5
-
[FUSE] rmdir on CollectionDirectory sets expires_atNew1
-
[FUSE] Trash directory to list, inspect, and un-trash trashed collectionsNew1
-
[FUSE] Don't display expiring collections in regular collection listingsNew1
-
[FUSE] Make .arvados#collection available in collection subdirectoriesNew1
-
[FUSE] .arvados#collection is missing or outdated after writing inside collectionNew1
-
[FUSE] Add timestamp to arv-mount --logfile optionNew1
-
add key/value support for tagsNew1
-
crunchstat-summary should calculate averages of all metricsNew1
-
[Provenance Tracking] jobs refer to collections by uuids, not pdhNew1
-
Add Gantt chart for pipeline optimizationNew1
-
get rid of dependencies python-pyasn1 python-pyasn1-modulesNew1
-
[FUSE] arv-mount is too slow for strelkaNew1
-
[Documentation] Write a Crunch2 wiki pageNew11.01.0
-
[Documentation] Write a Crunch wiki pageNew11.01.0
-
[Crunchv2] python thread error after job successNew1
-
[SDKs] PySDK fails to load CAs for SSL verification when run inside CondaNew1
-
[Crunch] crunch-job can miss the final log output of a jobNew1
-
[FUSE] When we give up trying to write a block, the next operation on the file should failNew1
-
[Workbench] Bad URL quoting/parsing in File links from the pipeline template Components tabNew1
-
[Python SDK] Add a Collection method to efficiently concatenate filesNew1
-
[Crunch] Limit maximum wait time between retriesNew1
-
[Crunch] [UX] Standard excepthook to help debug job problemsNew11.01.0
-
[SDKs] arv-copy fails to copy a Docker image specified with repo:tag syntaxNew10.50.5
-
[Workbench] The "Log" tab should have an notification that the job has been queuedNew1
-
[Node Manager] Less logging of tracebacks for routine exceptionsNew1
-
[API] Bad compute node address detection on private networksNew1
-
[SDKs] WebSocketClient Exception 'NoneType' object is not callableIn Progress20.50.5
-
[Crunch] Log throttling shouldn't throttle logs from crunchstat, crunch-jobNew1
-
[FUSE] Add --umask, --fmask, --dmask options to control file permissionsNew11.01.0
-
[SDKs] Bad use of RetryLoop in events.pyNew1
-
[SDK] arvados.arvfile.readall_decompressed() does not return all blocks on a fileNew1
-
[Crunch] Job was repeatedly retried on same bad compute node until abandonedNew1
-
[Docs] Many tutorial instructions are wrong outside Curoverse clustersNew1
-
[Workbench] No user profile should be required in the default configurationNew10.50.5
-
[Docs] Document Git 1.7.10+ dependency for shell node and HTTPS Git cloningNew1
-
[Docs/Workbench] Document how to clone repositories over HTTPSNew1
-
[Docs/Workbench] Improve SSH agent documentationNew1
-
[Workbench] Hide file preview buttons when preview isn't possible with current keep-web configNew11.01.0
-
[PySDK] API client logs a warning when you create an object without an owner_uuidNew1
-
[Node Manager] Broken nodes always get shut down, exempt from all node-counting considerationsNew1
-
[NodeManager] Use sys.exc_clear() to release exception tracebacksNew1
-
[Node Manager] Minimum idle time before node is eligible for shutdownNew1
-
[Node Manager] qr1hi nodemanager can't start if ulimit is in placeNew1
-
[API] Go code to connect to the API server database and make basic sense of itNew1
-
[API] Go code to implement the Arvados API permissions modelNew1
-
[API] List queries using "distinct" option return incorrect number of items_availableNew1
-
[API] Should not be necessary to host git repos on the same host as API serverNew12.02.0
-
[FUSE] Listing a project directory is slow when there are many subprojectsIn Progress2
-
[FUSE] arv-mount should detect and log any files/dirs that are still open after unmountingNew1
-
[FUSE] Reset mount-tmp to the state of another collectionNew1
-
[SDKs] Update run-command to use arv-mount --mount-tmp instead of staging directoryNew1
-
[API] Job model validates that the script exists in the repository at script_versionNew11.01.0
-
[SDKs] Port arv-keepdocker to use the docker-py libraryNew1
-
[SDKs] `arv keep docker` can upload an image already saved as .tarNew1
-
[SDKs] `arv keep docker` can make links for an image already in a collectionNew1
-
[SDKs] Clients can specify which auth config file to load.New10.50.5
-
[SDKs] PySDK one_task_per_input_file should support a num_retries argumentNew1
-
[SDKs] arv CLI program accepts "-" and "/path/to/file" as values for parameters that expect JSON (most notably the "body" parameter)New10.50.5
-
[SDKs] arv-copy continue on errorNew1
-
[SDK] arv-copy better Git repository error reportingNew1
-
[FUSE] arv-mount exits non-zero if any I/O errors were returnedNew10.50.5
-
[API] Asset pipeline does not work unless config/environments/production.rb is present at buildtime and runtimeNew1
-
[API] CSS+images missing on login_failure.htmlNew1
-
[Crunch] crunch-dispatch should run the bundled version of crunch-job specified by Gemfile.lockNew10.50.5
-
[API] [Workbench] config:check catches and reports YAML parsing errorsNew1
-
[SSO] [API] [Workbench] Have config:check sanity check secretsNew1
-
[API] [Workbench] Check for nonexistent config params during rake config:checkNew10.50.5
-
[CRUNCH] Fail gracefully when arvados repo doesn't existsNew1
-
[Keep] keepstore status.json should report runtime environmentNew1
-
[Workbench] Crashes with Fiddlesticks when trying to view a pipeline instance graph copied from another clusterNew10.50.5
-
[Workbench] [Fiddlesticks] Live job log should show recent historyNew12.02.0
-
[Workbench] Doesn't explain why a job can't be cancelledNew1
-
[Workbench] Show all known runtime_constraints in job status paneNew1
-
[Node Manager] Detect and shut down nodes that fail provisioning in AzureNew1
-
[Keep] Keepstore and keepproxy support HTTP Range requestsNew12.02.0
-
[SDKs] [FUSE] Python SDK and arv-mount use Range requests when a caller requests part of a block that has been ejected from the cacheNew12.02.0
-
[API] Job log cleaner should not clean logs when the job's log is the empty collectionNew1
-
[SDKs] Document that arv-copy accepts collection PDHs (ie content addresses) as argumentsNew10.50.5
-
[SDKs] Recursive pipeline instance arv-copy doesn't copy job objects, losing metadataNew1
-
[Crunch] Unhelpful translation of script parameter outside script_parametersNew11.01.0
-
[SSO] Template calls undefined method after fresh local accounts installationNew1
-
[SDKs] Unhelpful 404 stack trace when trying to arv-copy a collection without accessNew1
-
[git] "git clone https://..." with a bogus token should respond 4xx, not 5xxNew10.50.5
-
[Keep-store] make keep-store lookup token at runtime like keep-proxy doesNew11.01.0
-
[SDKs] arv-copy continues copying when a collection's content address is wrong, but warns and exits a special codeNew12.02.0
-
[SDK] arv-copy automatically creates new repository(ies) on the destination clusterNew1
-
[SDKs] Teach arv-copy to copy whole projectsNew1
-
[Workbench] node visibility as admin vs ordinary user does not line upNew1
-
[Keep] keepproxy should log real IP addressNew10.50.5
-
ubuntu package libarvados-perl should depend on libcrypt-ssleay-perlNew1
-
[Docs] Refresh Google OAuth2 setup in SSO install guideNew10.50.5
-
[Docs] Install guide keepstore runit script has bad syntaxResolved3
-
[Documentation] RVM and passenger recipes are missing detailsNew10.50.5
-
[Deployment] arvados-api-server-upgrade.sh should set up git_repositories_dirNew1
-
[login-sync] Sets up settings.confNew1
-
[Documentation] Various small bugs in the CLI SDK install guideNew1
-
[Documentation] Various small bugs in the install guideNew1
-
[Docs] keep-web runit script depends on sudo configurationNew1
-
[Documentation] Clarify PostgreSQL setup commands for Software Collections usersNew10.50.5
-
[Docs] Install guide missing Websockets detailsClosed50.50.5
-
[Wiki] Clean up Computation_and_Pipeline_Processing pageNew1
-
[Docs/Deployment] MUNGE, Nginx, PostgreSQL services don't start on boot on CentOS 6New1
-
[Documentation] Install guide incurs RVM's sudo wrathNew10.50.5
-
[Docs] SSO install guide documents default_link_*New10.50.5
-
[Documentation] Install guide explains a few different deployment optionsNew12.02.0
-
[Documentation] FUSE documentation should note granting FUSE permissionsNew10.50.5
-
[Documentation] Make keepproxy install guide follow nginx conventionsNew10.50.5
-
[Tests] Make slow tests optional (e.g., run-tests.sh --short)In Progress2
-
[Workbench] Many shell node instructions are wrong outside Curoverse clustersNew1
-
[Workbench] view log via keep-web test fails in arvboxResolved3
-
[API] specifying an invalid filter should result in an errorNew1
-
[API] Support numeric filter comparisons for numeric fieldsNew1
-
[API] Synthetic collections include the "kind" fieldNew1
-
[Deployment] Test distribution packagesNew1
-
[Workbench/API] Does not derive key name from comments with whitespaceNew1
-
[API] [Maybe] Update API server to support Git 1.7.2New1
-
[Node Manager] Mishandles stop signalsNew1
-
[Node Manager] a node filled up its /tmp which killed slurm and docker, node unusable. Node manager did not kill the node.New1
-
[API] Trying to update a collection by PDH raises a NoMethodErrorNew1
-
[API] "order" params should be rejected or used (not silently ignored) even when they reference columns missing from the "select" paramNew10.50.5
-
[API] Accept collection UUID as a job's docker_image constraintNew10.50.5
-
[API] Finalize and document the collections/provenance and collections/used_by API callsNew1
-
[Keep] keepstore should notify sysadmin about error conditions (trying harder than just log.Print())New1
-
[SDKs] Remove ruby dependency from arv wrapperNew11.01.0
-
[SDKs] arv-copy should not require --dst-git-repo when copying on the same clusterNew10.50.5
-
[SDKs] Python Keep block-r/w errors should indicate which collection/file was unreadable/unwritable as a resultNew11.01.0
-
[SDKs] arv-put progress meter scales based on file size, rather than being fixed to MiBNew1
-
[SDKs] arv-copy raises an unexpected backtrace on ^CNew1
-
Out of memory when using arv-copy not handled gracefullyNew1
-
[SDKs] Recursive arv-copy should report progress of the entire copy, in addition to individual objectsNew1
-
[SDKs] Refactor arv-get/put/copy into the Python "arv" wrapper using common exception-handling and argument parsingNew12.02.0
-
[SDKs] Ensure `arv keep put` replicates properlyNew1
-
[SDKs] Go Keep client enforces a minimum transfer rate for proxy connectionsNew1
-
[FUSE] [SDKs] Ensure FUSE and other SDK clients work with a default replication level != 2New1
-
[SDKs] Fetch all results with the CLI `list` commandNew1
-
[SDKs] arv get (and edit) should support a flag that suppresses display of non-writable attributes like "status" and "writable_by"New11.01.0
-
[SDKs] Add client-side join switches to `arv foo list`New1
-
[SDKs] GoSDK arvadosclient parameters are more transparentNew1
-
[SDKs] PySDK Collection class lets you iterate files and subcollections separatelyNew1
-
[SDKs] Git credentials helper in CLI toolsNew1
-
[SDKs] CLI tools install tab completion aidsNew1
-
[SDKs] arv-copy copies all metadata associated with an objectNew1
-
[SDKs] Can't `arv get` a collection by PDHNew1
-
[Workbench] Pagination sets limit on last page, causing unintended side effectsNew1
-
[Workbench] Copying jobs causes "SubmitIdReused" error if submit_id is not nullNew10.50.5
-
[Workbench] Project listings act like file manager directory trees, with expanding+collapsing treesNew1
-
[Workbench] Remove Keep disks link?New10.50.5
-
[Workbench] Ability to create a new project when creating a new pipeline instanceNew1
-
[Workbench] User admin interface should show which VM(s) the user can login toNew1
-
[Workbench] workbench move and copy is incompleteNew1
-
[Workbench] warn user when navigation will cause input text to be lostNew1
-
[Workbench] Pipeline template description display is difficult to read when making a pipeline template instanceNew1
-
[Workbench] Visible blanking between partial content reloadsNew1
-
[Workbench] Change project "Jobs and pipelines" tab to just "Pipelines"New1
-
[Workbench] Add an "invert selection" button to checklists alongside "un/select all"New1
-
[git] Should be able to clone git repositories that are shared with "anonymouspublic" without authenticationNew1
-
[FUSE] With --exec, expose the mount point in an environment variableNew1
-
[FUSE] arv-mount usage message shows incorrect order for [--exec ...] optionNew1
-
[Crunch] crunch-job does not sufficiently sanitize job parameter names when putting them in the environmentNew1
-
[crunchstat-summary] jobs with tasks_per_node>1 need node size recommendations adjustedNew10.50.5
-
[Keepstore] Support a portable data challenge APINew1
-
[Keepstore] Don't trash/delete blocks until they appear on multiple trash listsRejected6
-
[API] Do not accept an empty SSH key as validNew10.50.5
-
[Workbench] Project description styled differently based on whether or not the user can write to the projectNew1
-
[Keep] multiple response.Writeheader callsNew1
-
[SDKs] `arv create` creates an object from an empty fileNew10.50.5
-
[Documentation] Add Gitolite sanity check to install guideNew1
-
[Docs] file_names Collection field is undocumentedNew1
-
[Deployment] .yml.example files should be consistentNew10.50.5
-
[Documentation] Document installing the PySDK at a different PREFIXNew10.50.5
-
[Documentation] A user with an older install may land in a page that requires the "latest" prerequisites.New1
-
[Workbench] Displays content at the top of the dashboard, set by the sysadminNew1
-
[Workbench] Provide an interface for the sysadmin to set Dashboard banner contentNew1
-
[Workbench] Provide an interface to delete files from collectionsNew1
-
[SDKs] Provide a CLI tool to add files to an existing collectionNew1
-
[SDKs] Provide a CLI tool to remove files from a collectionNew1
-
[API] Advertise anonymous token in discovery documentNew1
-
[Crunch] Crunchstat and arv-mount print final stats before exitingNew11.01.0
-
[Workbench] Pipeline template listings should include links to the scriptsNew1
-
[Workbench] Reusing ArvadosResourceList results in inconsistent resultsNew1
-
[SDKs] CLI tools support MacNew1
-
[GATK Queue] Support a mechanism to redirect stderr for childrenClosed5
-
[Docker] API server starts before PostgreSQL is readyClosed5
-
[Docker] Bootstrap font fails to load in Workbench Docker imageClosed5
-
[Docker] Fix SSO configuration in published imagesClosed5
-
[Docker] API server uses omniauth.rb for SSO configuration, not application.yml7005Arvados36