2020-09-09 Sprint

09/09/2020 (Sprint start date 08/26/2020)

52%

56 issues   (55 closed1 open)

2020-09-09 Sprint

Arvados Contributor Wiki

This wiki has information related to the open source project. It's a work in progress, so come back often for updates and feel free to become a contributor.

Platform Overview

Using Arvados

Community

Contributing and hacking

Key Components

Issues by
Bug

14/14

Feature

7/7

Support

3/3

Task

25/26

Story

6/6

Related issues
# Subject Story Points
Story #15996 human WGS fastq to gvcf variant calling with GATK4 CWL (with report)
Feature #15888 Update run-tests.sh to use python 3
Feature #16679 Option to store token in session storage & idle timeout
Feature #16751 arvados-login-sync initializes user accounts with tokens
Support #16421 [doc] document deletion lifecycle of collections, and steps to undelete collections
Feature #16796 add webshell to arvbox
Bug #16778 Cannot set up federated user with a VM with LoginCluster
Feature #16803 script to push arvados tokens to shell node accounts
Bug #16689 [arvados-login-sync] user groups are not being updated
Bug #16726 other cluster's special users (root and anonymous) can appear in user list
Bug #16795 [a-d-c] flaky test
Story #16680 Ensure expired tokens are handle properly
Feature #16794 API ensures configured Users.AnonymousUserToken is valid
Bug #16773 webshell sends token too early
Bug #16790 [keep-web] S3 ListObjects response should not have empty NextMarker field
Bug #16781 webshell PAM should send "password:" or "token:" prompt
Bug #16779 arvados-login-sync incorrectly skips users without an ssh key
Feature #16739 [a-d-c] throttle option for concurrent VM create requests
Bug #16789 missing can_read link from anonymous_user to anonymous_group
Bug #16788 a-c-r depends on nodejs, should be documented and/or a package dependency
Story #16602 Workbench 2 uses correct version of arvados/jobs when submitting a workflow, not "latest"
Bug #16723 [a-d-c] flaky test "Error: container completed twice"
Support #16668 Load demo data from openslide
Story #16749 conveniently edit login/pass user list in arvbox to avoid hardcoded logins
Bug #16743 Some links do not work for wb2 v2.0.4
Story #16314 Support literal user/pass pairs in config file + make arvbox use it instead of SSO 1.0
Bug #16720 arv-mount exception handler bug
Story #16535 [keep-web] Minimal implementation of S3 API
Bug #16613 System Root Token cannot create tokens - null value in column "api_client_id"
1.0