Story Resolved Rejected
Sprint Impediments
9069
[BDT] Migrate pipeline to RDS
Brett Smith
79
0
3
impediments
-c-a
6
9040
[BD] Clean up Genevia pipeline for useability
Bryan Cosca
189
0
3
impediments
-c-a
6
9074
[Microsoft] [bcbio] Enable bcbio generation of CWL to flag gVCF output for GATK Haplotypecaller
Brad Chapman
188
0
3
impediments
-c-a
6
9071
[OPS] Set up a new cluster for Microsoft
Nico César
288
0
3
impediments
-c-a
6
9113
[Microsoft] [bcbio] Enable bcbio generation of CWL to flag gVCF output for Platypus
Brad Chapman
188
0
3
impediments
-c-a
6
9073
[Microsoft] [bcbio] Enable bcbio generation of CWL to flag gVCF output for Freebayes
Brad Chapman
188
0
3
impediments
-c-a
6
9060
[bcbio] Automatically generate CWL workflows that take advantage of Arvados provenance
Brad Chapman
188
0
3
impediments
-c-a
6
9037
[Microsoft] [bcbio] Rewrite CWL workflows to take advantage of Arvados provenance
Jiayong Li
303
0
3
impediments
-c-a
6
8087
8087
Joshua Randall
[SDKs] `arv create` can read JSON from a file, skipping an interactive editor
Resolved
0.5
8087
36
196
136
6
0.5
8519
Review PR #43
Joshua Randall
196
0
8087
3
36
-c-a
5
8876
8876
Radhika Chippada
[Workbench] Unify job and pipeline instance show tabs using Work Unit interface
Resolved
2.0
8876
36
72
136
6
2.0
9207
Review branch 8876-work-unit
Tom Clegg
3
0
8876
3
36
-c-a
5
9275
9275
Radhika Chippada
[CWL] arvados-cwl-runner creates job components instead of pipeline instance
Resolved
1.0
9275
36
72
136
2
1.0
9295
Review branch 9275-cwl-runner-creates-jobs
Peter Amstutz
47
0
9275
3
36
-c-a
5
9187
9187
Peter Amstutz
[Crunch2] Update dispatcher to use new API support
Resolved
1.0
9187
36
47
136
6
1.0
9196
Review 9187-crunchv2-dispatching
Tom Clegg
3
0
9187
3
36
-c-a
5
9195
Update local dispatcher
Peter Amstutz
47
0
9187
3
36
-c-a
5
9194
Update slurm dispatcher
Peter Amstutz
47
0
9187
3
36
-c-a
5
9365
Review 9187-requeued-containers
Tom Clegg
3
0
9187
3
36
-c-a
5
9343
9343
Tom Clegg
[Keep] MakeArvadosClient is asking for extra unneded environment variables
Resolved
0.5
9343
36
3
136
1
0.5
8905
8905
Brett Smith
[Deployment] arvados-sso-server deb package unnecessarily depends on "postgresql" meta-package
Resolved
0.5
8905
36
79
136
1
0.5
9272
9272
Tom Clegg
[Crunch2] Pass container auth token (not dispatch token) to arv-mount, and (if requested) into the container itself
Resolved
1.0
9272
36
3
136
2
1.0
9299
Retrieve & use correct token
Tom Clegg
3
0
9272
3
36
-c-a
5
9291
Review 9272-use-container-auth
Tom Clegg
3
0
9272
3
36
-c-a
5
9305
Review 9272-test-races
Peter Amstutz
47
0
9272
3
36
-c-a
5
9306
(extras) fix state transitions to match API rules
Tom Clegg
3
0
9272
3
36
-c-a
5
9233
9233
Bryan Cosca
Fix Ancestry Mapper pipeline
Resolved
0.5
9233
36
189
136
1
0.5
9162
9162
Tom Clegg
[Block Manager] Trashes unreferenced blocks (with mtime > TTL if desired) and overreplicated block
Resolved
0.5
9162
36
3
136
6
0.5
9206
Build data-block map
Tom Clegg
3
0
9162
3
36
-c-a
5
9209
Recommend trash/pull operations for a block
Tom Clegg
3
0
9162
3
36
-c-a
5
9210
Buffer trash/pull operations and forward to keepstores
Tom Clegg
3
0
9162
3
36
-c-a
5
9235
Accept keep services list in config
Tom Clegg
3
0
9162
3
36
-c-a
5
9237
run as a service, wake up on timer and SIGUSR1
Tom Clegg
3
0
9162
3
36
-c-a
5
9229
docs and lint
Tom Clegg
3
0
9162
3
36
-c-a
5
9300
Build & publish package
Tom Clegg
3
0
9162
3
36
-c-a
5
9211
Review 9162-keep-balance
Radhika Chippada
72
0
9162
3
36
-c-a
5
9242
9242
Brett Smith
[Deployment] python-six backport breaks other users
Resolved
9242
36
79
136
1
9247
Review 9242-python-backport-prefix-wip
Ward Vandewege
1
0
9242
3
36
-c-a
5
9316
9316
Brett Smith
[SDKs] CWL SDK package needs to include its own README.rst
Resolved
9316
36
79
136
1
0
-c-a
0
impediments
-c-a
June 10, 2016 14:00:48.7440400123596191 +0000