Arvados

Story

Resolved

Closed

Sprint Impediments

20420 20420 27. Add the release to zenodo.org Resolved Resolved 3 20420 36 401 3
20594 20594 Lucas Di Pentima Lucas Di Pentima 375 Deployment 60 Deployment scaling nginx settings Resolved Resolved 3 20594 36 375 401 1	20596 20596 Review 20594-scaling-nginx-settings Peter Amstutz 47 0 20594 3 36 -c-a 5
20031 20031 Stephen Smith Stephen Smith 2794 Workbench2 77 Workbench2 New collection file browser copy/move operations Resolved Resolved 3 2.0 2.0 2.0 20031 36 2794 401 2 2.0	20279 20279 Review 20031-collection-files-batch-operations Stephen Smith 2794 0 20031 3 36 -c-a 5
20522 20522 Tom Clegg Tom Clegg 3 Crunch 52 Crunch Option to load private key from specified file instead of inline in config file Resolved Resolved 3 0.5 0.5 0.5 20522 36 3 401 2 0.5	20551 20551 Review 20522-load-dispatch-priv-key Tom Clegg 3 0 20522 3 36 -c-a 5
20531 20531 Peter Amstutz Peter Amstutz 47 CWL 79 CWL When getting logs from child job to print error, distinguish between job couldn't start and non-zero exit Resolved Resolved 3 0.5 0.5 0.5 20531 36 47 401 1 0.5	20563 20563 Review 20531-cwl-log-tail Brett Smith 79 0 20531 3 36 -c-a 5
20449 20449 Peter Amstutz Peter Amstutz 47 Workbench2 77 Workbench2 Background refresh tasks of "all processes" issues Resolved Resolved 3 20449 36 47 401 1	20502 20502 Review 20449-processes-refresh Stephen Smith 2794 0 20449 3 36 -c-a 5
20541 20541 Tom Clegg Tom Clegg 3 API 57 API make crunch-run API calls lighter weight, avoid fetching mounts (or returning mounts on update) when not needed Resolved Resolved 3 20541 36 3 401 1	20553 20553 Review 20541-less-fetching-mounts Tom Clegg 3 0 20541 3 36 -c-a 5
20540 20540 Tom Clegg Tom Clegg 3 API 57 API crunch-run should sleep-and-retry after transient failures on API calls, especially when container is succeeding Resolved Resolved 3 0.5 0.5 0.5 20540 36 3 401 1 0.5	20554 20554 Review 20540-crunch-run-retry Peter Amstutz 47 0 20540 3 36 -c-a 5
20433 20433 Brett Smith Brett Smith 79 Crunch 52 Crunch Config option to have crunch-run stop sending logs to logs table Resolved Resolved 3 0.5 0.5 0.5 20433 36 79 401 2 0.5	20443 20443 Review 20433-crunch-log-zero-bytes-job Brett Smith 79 0 20433 3 36 -c-a 5
20545 20545 Brett Smith Brett Smith 79 API 57 API Filter If-None-Match header in controller Resolved Resolved 3 20545 36 79 401 1	20552 20552 Review 20545-drop-if-none-match Brett Smith 79 0 20545 3 36 -c-a 5
20595 20595 Peter Amstutz Peter Amstutz 47 Docker 68 Docker "error inspecting container" causing containers to be abandoned Resolved Resolved 3 20595 36 47 401 1
20561 20561 Peter Amstutz Peter Amstutz 47 Crunch 52 Crunch Log when files from input are being propagated to output in crunch-run finalization Resolved Resolved 3 0.5 0.5 0.5 20561 36 47 401 1 0.5	20562 20562 Review 20561-file-copy-logging Peter Amstutz 47 0 20561 3 36 -c-a 5
20485 20485 Tom Clegg Tom Clegg 3 Crunch 52 Crunch Option to skip automatic SSH key deployment on cloud VMs Resolved Resolved 3 0.5 0.5 0.5 20485 36 3 401 2 0.5	20597 20597 Review 20485-optional-deploy-ssh-key Tom Clegg 3 0 20485 3 36 -c-a 5
20511 20511 Tom Clegg Tom Clegg 3 Crunch 52 Crunch High number of "aborted" boot outcomes Resolved Resolved 3 20511 36 3 401 1	20549 20549 Review 20511-aborted-boot Tom Clegg 3 0 20511 3 36 -c-a 5
20520 20520 Tom Clegg Tom Clegg 3 Crunch 52 Crunch [arvados-dispatch-cloud] configurable instance initialization script Resolved Resolved 3 20520 36 3 401 2	20550 20550 Review 20520-instance-init-command Tom Clegg 3 0 20520 3 36 -c-a 5
20474 20474 Lucas Di Pentima Lucas Di Pentima 375 Ensuring metrics are available during busy times Resolved Resolved 3 0.5 0.5 0.5 20474 36 375 401 1 0.5	20534 20534 Review 20474-installer-api-reqs-limit Lucas Di Pentima 375 0 20474 3 36 -c-a 5
20538 20538 Stephen Smith Stephen Smith 2794 Workbench2 77 Workbench2 Unhandled exception when trying to delete a process that you don't have write permission Resolved Resolved 3 20538 36 2794 401 1	20558 20558 Review 20538-delete-process-error-handling Lisa Knox 3103 0 20538 3 36 -c-a 5
20393 20393 Peter Amstutz Peter Amstutz 47 Release Arvados 2.6.2 Resolved Resolved 3 20393 36 47 401 6	20394 20394 1. Prepare X.Y-staging branch 0 20393 3 36 -c-a 5 20395 20395 2. Update the "Upgrading Arvados and Release notes" doc page (main and release branch), update provision.sh, formula and arvbox to point to release 0 20393 3 36 -c-a 5 20396 20396 3. Ensure that the entire automated testing pipeline is passing on Jenkins 0 20393 3 36 -c-a 5 20397 20397 4. Review release branch 0 20393 3 36 -c-a 5 20398 20398 5. Draft release notes and publish them to www-dev Brett Smith 79 0 20393 3 36 -c-a 5 20399 20399 6. Review release notes 0 20393 3 36 -c-a 5 20400 20400 7. Create next redmine release 0 20393 3 36 -c-a 5 20401 20401 8. Build RC packages 0 20393 3 36 -c-a 5 20402 20402 9. Build RC arvados/jobs image 0 20393 3 36 -c-a 5 20403 20403 10. Ensure installer tests are passing 0 20393 3 36 -c-a 5 20404 20404 11. Build compute image & deploy RC packages to playground 0 20393 3 36 -c-a 5 20405 20405 12. Run bam-to-vcf demo pipeline 0 20393 3 36 -c-a 5 20406 20406 13. Manual testing 0 20393 3 36 -c-a 5 20407 20407 14. Approve RC for release 0 20393 3 36 -c-a 5 20408 20408 15. Build final release packages 0 20393 3 36 -c-a 5 20409 20409 16. Publish stable arvados/jobs Docker image 0 20393 3 36 -c-a 5 20410 20410 17. Push packages to stable 0 20393 3 36 -c-a 5 20411 20411 18. Publish Python and Ruby packages 0 20393 3 36 -c-a 5 20412 20412 19. Publish Java package 0 20393 3 36 -c-a 5 20413 20413 20. Publish R package 0 20393 3 36 -c-a 5 20414 20414 21. Publish arvados/arvbox-demo image 0 20393 3 36 -c-a 5 20415 20415 22. Tag commits, fast-forward X.Y-release branch to match X.Y-staging 0 20393 3 36 -c-a 5 20416 20416 23. Ensure doc.arvados.org is up to date 0 20393 3 36 -c-a 5 20417 20417 24. Merge release notes (step 6) from "develop" to "main" on arvados.org 0 20393 3 36 -c-a 5 20418 20418 25. Send out release announcements Brett Smith 79 0 20393 3 36 -c-a 5 20419 20419 26. Major releases only: Copy "run-tests" jobs in jenkins 0 20393 3 36 -c-a 5
20229 20229 Tom Clegg Tom Clegg 3 Documentation 58 Documentation Document /_inspect/requests management endpoint Resolved Resolved 3 0.5 0.5 0.5 20229 36 3 401 1 0.5	20438 20438 Review 20229-doc-inspect-requests Tom Clegg 3 0 20229 3 36 -c-a 5