Story Resolved Closed Rejected
Sprint Impediments
3899
[Crunch] crunch-job and Workbench use the new job state attribute (see #3898) instead of paying attention to (and updating) running and success flags.
Peter Amstutz
47
0
3
impediments
-c-a
2
4188
[OPS] Automatically upload arvados/jobs image to docker registry as part of Jenkins docker build step.
Ward Vandewege
1
0
3
impediments
-c-a
3
3824
[Crunch] crunch-job should create task execution environment inside docker container, not on worker host.
Tom Clegg
3
0
3
impediments
-c-a
1
3859
[Crunch] Job lock method to fix race condition with multiple instances of crunch-dispatch
Peter Amstutz
47
0
3
impediments
-c-a
1
4044
4044
Tom Clegg
[Crunch] job spawns tasks but never runs them, gets stuck waiting for first task to end, even though it has already ended.
Resolved
1.0
4044
36
3
78
1
1.0
4130
Review 4044-crunchstat-wait
Peter Amstutz
47
0
4044
3
36
-c-a
5
4091
4091
Radhika Chippada
[Workbench] Add tests for undertested parts of Workbench, including infinite scroll.
Resolved
1.0
4091
36
72
78
6
1.0
4326
Review branch: 4091-test-infinite-scrolling
Tom Clegg
3
0
4091
3
36
-c-a
5
4328
Data collections tab for a project displaying all object types.
Radhika Chippada
72
0
4091
3
36
-c-a
5
4329
Sort order created_at being ignored by the server
Radhika Chippada
72
0
4091
3
36
-c-a
5
4297
4297
Tom Clegg
[Crunch] crunch-dispatch eats way too much cpu
Resolved
0.5
4297
36
3
78
1
0.5
4323
Review 4297-dispatch-load
Tom Clegg
3
0
4297
3
36
-c-a
5
4064
4064
[Crunch] Typoed "output_of" value in pipeline leaves a job stuck in the queue
Resolved
0.5
4064
36
78
1
0.5
4171
[Crunch] arv-run-pipeline-instance should detect bad "output_of" values and fail the pipeline
0
4064
5
36
-c-a
5
4134
4134
Radhika Chippada
[Support] fix bugs and write tests (second half)
Resolved
5.0
4134
36
72
78
3
5.0
3813
3813
[Workbench] add link to pipeline instance from job view page
Resolved
0.5
3813
36
78
2
0.5
4015
4015
Tim Pierce
[Workbench] Collection chooser should be filling in portable_data_hash as well as collection uuid when used to pick pipeline inputs.
Resolved
0.5
4015
36
44
78
1
0.5
4304
Review 4015-collection-chooser-portable-data-hash
Tim Pierce
44
0
4015
3
36
-c-a
5
4210
populate portable_data_hash in the collection chooser
Tim Pierce
44
0
4015
3
36
-c-a
5
4285
4285
Radhika Chippada
[Workbench] Not found error when the view or download icons are clicked for a file in a subdir of a collection.
Resolved
0.5
4285
36
72
78
1
0.5
4319
Review branch: 4285-view-download-collection-subdir-files
Radhika Chippada
72
0
4285
3
36
-c-a
5
4313
4313
Tim Pierce
[Tests] remove stale *.pyc files between Jenkins tests
Resolved
0.5
4313
36
44
78
1
0.5
4051
4051
[Workbench] Pipeline component display order should be controlled by sort_order attributes if present.
Rejected
0.5
4051
36
78
2
0.5
3699
3699
Tim Pierce
[SDKs] Copy a pipeline instance, along with its input and output data, from one arvados instance to another
Resolved
1.0
3699
36
44
78
6
1.0
3742
arv-copy works on collections
Tim Pierce
44
0
3699
3
36
-c-a
5
3744
arv-copy works on pipeline instances
Tim Pierce
44
0
3699
3
36
-c-a
5
3743
arv-copy works on docker images
Tim Pierce
44
0
3699
3
36
-c-a
5
3758
arv-copy works on git repos
Tim Pierce
44
0
3699
3
36
-c-a
5
3838
Review 3699-arv-copy
Peter Amstutz
47
0
3699
3
36
-c-a
5
3784
arv-copy works on pipeline templates
Tim Pierce
44
0
3699
3
36
-c-a
5
3759
arv-copy authenticates to multiple Arvados instances
Tim Pierce
44
0
3699
3
36
-c-a
5
4295
4295
Peter Amstutz
[API] Improve websocket efficiency
Resolved
0.5
4295
36
47
78
1
0.5
4301
Review 4295-efficient-websockets
Peter Amstutz
47
0
4295
3
36
-c-a
5
4195
4195
Radhika Chippada
[Documentation] Fix Workbench pipeline tutorial
Resolved
0.5
4195
36
72
78
1
0.5
4280
Review branch: 4195-pipeline-tutorial
Radhika Chippada
72
0
4195
3
36
-c-a
5
4228
4228
Radhika Chippada
[Workbench (probably)] Cannot create new collection with selected files in shared pipeline directory.
Resolved
0.5
4228
36
72
78
1
0.5
4287
Review branch: 4228-collection-subdir-files
Radhika Chippada
72
0
4228
3
36
-c-a
5
4266
4266
Tom Clegg
[Crunch] crunch-dispatch should process logs efficiently, particularly while throwing away excessive log data.
Resolved
0.5
4266
36
3
78
1
0.5
4272
Review 4266-log-performance
Tom Clegg
3
0
4266
3
36
-c-a
5
4267
Optimize ruby code
Tom Clegg
3
0
4266
3
36
-c-a
5
4058
4058
Peter Amstutz
[Workbench] "Show portable data hash" page should show the kind of content that relates to PDH instead of trying to be a mostly-functional "show collection" page.
Resolved
1.0
4058
36
47
78
1
1.0
4263
Review 4058-workbench-collection-redirect
Peter Amstutz
47
0
4058
3
36
-c-a
5
4149
Redirect when there is a single collection, show a "menu" page when there is more than one collection
Peter Amstutz
47
0
4058
3
36
-c-a
5
4150
Add tests
Peter Amstutz
47
0
4058
3
36
-c-a
5
4026
4026
Radhika Chippada
[Workbench] "Move to project..." button should be displayed to an admin user even if the sub-project is in another user's Home project.
Resolved
0.5
4026
36
72
78
1
0.5
4261
Review branch: 4026-project-move-admin
Radhika Chippada
72
0
4026
3
36
-c-a
5
4227
4227
Radhika Chippada
[Workbench] Pipeline elapsed time is misformatted
Resolved
0.5
4227
36
72
78
1
0.5
4277
Review branch: 4227-date-display
Radhika Chippada
72
0
4227
3
36
-c-a
5
3826
3826
Tom Clegg
[Crunch] Display network activity in crunchstat
Resolved
2.0
3826
36
3
78
6
2.0
4198
Review 3826-crunchstat-netstats
Tom Clegg
3
0
3826
3
36
-c-a
5
4181
Collect container-level network stats
Tom Clegg
3
0
3826
3
36
-c-a
5
4225
Review 3826-crunchstat-netstats -- esp for language issues
Tim Pierce
44
0
3826
3
36
-c-a
5
4152
Talk to Ward
Tom Clegg
3
0
3826
3
36
-c-a
5
4054
4054
Radhika Chippada
[Workbench] In the project sharing tab, show email addresses alongside full names.
Resolved
0.5
4054
36
72
78
1
0.5
4260
Review branch: 4054-sharing-email
Radhika Chippada
72
0
4054
3
36
-c-a
5
3787
3787
Peter Amstutz
[Documentation] Add a section in the User Guide about how to create, upload, and use a custom docker image
Resolved
0.5
3787
36
47
78
3
0.5
4224
Review 3787-docker-docs
Peter Amstutz
47
0
3787
3
36
-c-a
5
4147
Write new documentation page
Peter Amstutz
47
0
3787
3
36
-c-a
5
4062
4062
Radhika Chippada
[Workbench] Infinite scrolling in the 'Jobs and pipelines' tab should not keep repeating the same list over and over again
Resolved
0.5
4062
36
72
78
1
0.5
4226
Review 4062-infinite-scroll-repeat-issue (this addresses 4062 and 4091)
Radhika Chippada
72
0
4062
3
36
-c-a
5
4068
4068
Radhika Chippada
[Workbench] the /manage_account account page does not show all repositories a user has access to
Rejected
0.5
4068
36
72
78
1
0.5
4133
4133
Brett Smith
[Support] fix bugs and write tests (first half)
Resolved
5.0
4133
36
79
78
3
5.0
4086
[Crunch] Not enough memory to run GATK
Brett Smith
79
High
5
0
4133
3
36
-c-a
5
4189
[Workbench] Manage access doesn't give full access to projects
Brett Smith
79
0
4133
3
35
-c-a
5
4202
Review 4189-workbench-project-admin-attr-editing-wip
Brett Smith
79
0
4133
3
35
-c-a
5
4200
4200
[Crunch] Notify user, cancel pipeline when it cannot run because a parameter is the output_of a nonexistent component
Closed
0.5
4200
36
78
1
0.5
4083
4083
Peter Amstutz
[SDKs] Add "import _strptime" to work around potential Python bug.
Resolved
0.5
4083
36
47
78
1
0.5
4252
Review 4083-import-strptime
Peter Amstutz
47
0
4083
3
36
-c-a
5
4151
Figure out what uses strptime and fix them
Peter Amstutz
47
0
4083
3
36
-c-a
5
4229
4229
Tom Clegg
[Keep] Add missing Close() calls
Resolved
0.5
4229
36
3
78
1
0.5
4240
Review 4229-close-files
Peter Amstutz
47
0
4229
3
36
-c-a
5
4219
4219
Tom Clegg
[Keep] keepstore should not fail permission signature verification just because extra hints are present in URL.
Resolved
0.5
4219
36
3
78
1
0.5
4220
Ignore extra hints when checking signatures. Write tests.
Tom Clegg
3
0
4219
3
36
-c-a
5
4221
Review 4219-verify-with-hints
Tim Pierce
44
0
4219
3
36
-c-a
5
4188
4188
Ward Vandewege
[OPS] Automatically upload arvados/jobs image to docker registry as part of Jenkins docker build step.
Resolved
0.5
4188
36
1
78
3
0.5
3692
3692
Peter Amstutz
[API] Eventbus filters parameter should use implicit AND (like REST filters) instead of implicit OR.
Resolved
0.5
3692
36
47
78
1
0.5
4179
Review 3692-event-bus-fix-and
Peter Amstutz
47
0
3692
3
36
-c-a
5
4176
Write test
Peter Amstutz
47
0
3692
3
36
-c-a
5
4177
Fix it
Peter Amstutz
47
0
3692
3
36
-c-a
5
3656
3656
Peter Amstutz
[SDKs] "arv create object_type" should create a new object and then open it like "arv edit" does now.
Resolved
0.5
3656
36
47
78
6
0.5
4170
Review 3656-arv-create
Peter Amstutz
47
0
3656
3
36
-c-a
5
4148
Implement 'arv create'
Peter Amstutz
47
0
3656
3
36
-c-a
5
4126
4126
Radhika Chippada
[SDKs] Parameter in pipeline runner is missing
Resolved
0.5
4126
36
72
78
1
0.5
4178
Review 4126-preserve-parameter-hash
Peter Amstutz
47
0
4126
3
36
-c-a
5
4102
4102
[Keep] Fix FUSE test suite so it does not need to be updated every time a new collection fixture is added to apiserver
Rejected
0.5
4102
36
78
1
0.5
4196
4196
[SDKs] arv-keepdocker needs to stop using `docker pull -t`
Resolved
0.5
4196
36
78
1
0.5
4239
4239
Brett Smith
[SDKs] Python SDK doesn't work with apiclient 1.3
Resolved
0.5
4239
36
79
78
1
0.5
4249
4249
[Workbench] Can't view/download files that are retrievable from arv-get
Resolved
0.5
4249
36
78
1
0.5
0
-c-a
0
impediments
-c-a
October 31, 2014 13:44:48.40574216842651367 +0000