Joshua Randall

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  • Registered on: 07/13/2014
  • Last connection: 08/14/2017

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Reported issues: 111

08/14/2017

05:05 pm Arvados Bug #12113: mandatory keep_web configuration missing from workbench install instructions
I see now that it is mentioned much much later in the install guide under http://doc.arvados.org/install/install-keep...
05:02 pm Arvados Bug #12113 (New): mandatory keep_web configuration missing from workbench install instructions
It seems that one of keep_web_url or keep_web_download_url are now mandatory in order for workbench to start, but the...

06/29/2017

03:24 pm Arvados Bug #11917: Error fetching collection (HttpError 422) during call to arvados.util.listdir_recursive
From production.log:...
03:20 pm Arvados Bug #11917 (Feedback): Error fetching collection (HttpError 422) during call to arvados.util.list...
...

06/15/2017

03:43 pm Arvados Bug #11843: Timeout attempting to create job for component gatk-haplotypecaller-cram-gvcf: Net::R...
logs table entries for a pipeline instance that had this issue are attached (logs.txt)....

06/12/2017

12:13 pm Arvados Bug #11843 (In Progress): Timeout attempting to create job for component gatk-haplotypecaller-cra...
Lately we get a lot of jobs whose sole log output is:...

04/28/2017

03:11 pm Arvados Bug #11556: occasional API server badness: 'incomplete response received from application'
as suggested by the postgres logs, am now raising the checkpoint settings:
was the default:...
03:05 pm Arvados Bug #11556: occasional API server badness: 'incomplete response received from application'
postgresql-9-3-main.log during the same time period:...
02:59 pm Arvados Bug #11556: occasional API server badness: 'incomplete response received from application'
This just happened again, and I went pretty soon after to look at the logs.
pg_stat_activity did have an autovacu...
02:35 pm Arvados Bug #11590 (Resolved): job reuse / re-use logic does not log decisions
It would be helpful if job reuse logic produced some log output to help understand why job output was or was not reus...

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