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Idea #2754

closed

Optimize Workbench "run pipeline" workflow for easy use case

Added by Tom Clegg almost 10 years ago. Updated almost 10 years ago.

Status:
Resolved
Priority:
Normal
Assigned To:
Category:
-
Start date:
05/20/2014
Due date:
Story points:
1.0

Description

Selecting a template
  • Separate lists of "my pipeline templates" and "shared with me". (Open "shared" tab by default if I have none of my own.)
  • Javascript-searchable table similar to "show folder" page
  • "Show pipeline template" page similar to "show folder" page. Instead of "contents" panel, show a list of my+shared pipeline instances that have used this template. Add "Run" button.
Selecting inputs
  • On "new pipeline instance" page, default to a friendly form view optimized (for now) for selecting a single input collection.
    • Any script_parameter without a "description" field does not get exposed at all
    • If you have exactly one collection in your "current selection", and the pipeline requires exactly one parameter that is a collection, default to your selected collection.
    • When a collection is selected, you get a preview of that collection -- at least the first few filenames, with sizes (this lets you compare with the input description which will say something like "input should have fastq or fastq.gz files")
    • Click "advanced" button/tab to switch to what is now the current view, with all parameters exposed
Nice to have:
  • Option to switch to "grid" view, using cards (sample code is currently commented out on the "show folder" page)

Files


Subtasks 5 (0 open5 closed)

Task #2792: New simplified pipeline instance formResolvedTom Clegg05/20/2014Actions
Task #2841: Review 2754-easy-run-pipelineResolvedTom Clegg05/20/2014Actions
Task #2788: New pipeline templates index pageResolvedTom Clegg05/20/2014Actions
Task #2869: Review 2754-pipeline-template-descriptionResolvedTom Clegg05/20/2014Actions
Task #2868: If no pipelines have been run, encourage user to view list of templates.ResolvedTom Clegg05/20/2014Actions
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